BLASTX nr result

ID: Rehmannia30_contig00034635 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00034635
         (515 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP14369.1| unnamed protein product [Coffea canephora]             82   2e-15
emb|CDP09717.1| unnamed protein product [Coffea canephora]             58   1e-06
ref|XP_021606349.1| uncharacterized protein LOC110610634 [Maniho...    55   7e-06

>emb|CDP14369.1| unnamed protein product [Coffea canephora]
          Length = 347

 Score = 82.4 bits (202), Expect = 2e-15
 Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 4/161 (2%)
 Frame = +3

Query: 12  DRISLSVYILWWLWKTRNLWRFQNVLMPEKEIVEFATKEWLEYNSVRSKDD---QHFKNP 182
           +RI L+V +LW +WK+RN  +F++  M    +V  AT+EW E+   +  D     H  N 
Sbjct: 116 ERIELTVNVLWQIWKSRNRRQFEDKGMDPMTVVNKATREWREFQEAQDVDGGNGSHTTN- 174

Query: 183 GIYHTSPYLNPDVAKDVGQFYILVSVQVQLNKE-AGWGIVVKNTEGNIIKSWYTSRDCGG 359
           G      +  P+V    G   I     VQ   E AGWG++ ++  GN + +W     C  
Sbjct: 175 GKEGLGGWREPEV----GWVKINSDAAVQQKAERAGWGMIARDCLGNALGAWAVPDTCCS 230

Query: 360 SPVEVLLLAIREGQLMAYKEKWKRIIFLLEDESLVTILNGG 482
           S  +   LA+R   LMA ++ W+R++F  + + L+  +N G
Sbjct: 231 SAKQEEALALRSAMLMAKQQGWRRVVFESDCKQLIDSINSG 271


>emb|CDP09717.1| unnamed protein product [Coffea canephora]
          Length = 613

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
 Frame = +3

Query: 12  DRISLSVYILWWLWKTRNLWRFQNVLMPEKEIVEFATKEWLEYNSV-RSKDDQHFKNPGI 188
           + + L+V ILW +WK RN W+F        E ++ A +EW E  S  R +     +    
Sbjct: 401 EHVELTVNILWQIWKRRNEWKFNAKRRHPWESIKKALQEWQEQASAWREEKSTPVEAERD 460

Query: 189 YHTSPYLNPDVAKDVGQFYILVSVQVQLNKEAGWGIVVKNTEGNIIKSWYTSRDCGGSPV 368
             T+     +  +D  Q  +   VQ Q N+  G GI+  N    ++ +W  +    GS +
Sbjct: 461 RETAE--TDEGGRDEMQIRLSTHVQEQTNR-VGTGIIATNFNHQLVSAWALTDRYAGSHL 517

Query: 369 EVLLLAIREGQLMAYKEKWKRI-IFLLEDESLVTILNG 479
           +    A++   + A + +W++I + LL  + L  I NG
Sbjct: 518 QTSAEAVKMAIIKARQLQWQKITVHLLSPQLLKMITNG 555


>ref|XP_021606349.1| uncharacterized protein LOC110610634 [Manihot esculenta]
          Length = 247

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
 Frame = +3

Query: 18  ISLSVYILWWLWKTRNLWRFQNVLMPEKEIVEFATKEWLEYNSVRSKDDQHFKNPGIYHT 197
           I L  ++LW +WK RN++ F N+  P +E V  A         +RS+DD  F+     H 
Sbjct: 21  IQLFAFLLWQIWKDRNVFTFNNMSKPAEESVSLA---------IRSRDD--FREATSNHP 69

Query: 198 SPYLNPDVAKDVGQFYILVSVQ------VQLNKEAGW---------GIVVKNTEGNII-- 326
            P    ++ + +      +S Q      V+LN +A W          ++V++  G++I  
Sbjct: 70  LPSHQSEMDQQLLIHQSQLSWQPPPLDFVKLNFDAAWDKNSNSGATAVIVRDPSGSVIDW 129

Query: 327 --KSWYTSRDCGGSPVEVLLLAIREGQLMAYKEKWKRIIFLLEDESLVTI 470
             +SW +  D    P+++  +A RE  L A    + R I  +E +SL+T+
Sbjct: 130 CCRSWVSISD----PLQLESIACREALLFAKSRGFSRSI--IEGDSLITV 173


Top