BLASTX nr result

ID: Rehmannia30_contig00034587 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00034587
         (441 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK74219.1| uncharacterized protein A4U43_C03F4020 [Asparagus...    94   1e-21
ref|XP_021910442.1| DNA replication complex GINS protein PSF2 is...    70   7e-12
gb|PON38652.1| hypothetical protein PanWU01x14_311080 [Parasponi...    57   7e-07
gb|KZV54069.1| Beta-galactosidase [Dorcoceras hygrometricum]           57   1e-06

>gb|ONK74219.1| uncharacterized protein A4U43_C03F4020 [Asparagus officinalis]
          Length = 143

 Score = 94.0 bits (232), Expect = 1e-21
 Identities = 62/128 (48%), Positives = 81/128 (63%), Gaps = 17/128 (13%)
 Frame = +3

Query: 66  QGGKEYEDSVFELNVS----TN-----DSDG--KTN----IETGIFNLDNLNMGDTRSIL 200
           +GG  YEDSVFE++++    TN     D++G  KTN    I+T   +   LN  + R  L
Sbjct: 16  RGGGVYEDSVFEIDINGQEKTNEVFEIDTNGQEKTNEVFEIDTNGTDFGTLNKEEWRPTL 75

Query: 201 AHGHKTDTRIIREARFNDERLFGKTYTKKKQIQSKKDAAVLPQGQESDPIPDP--KNSEN 374
               K + R I EARFNDERLFGKTYTK+++I+SK+D  +L QGQE DP PDP   ++EN
Sbjct: 76  IP--KQNARTIDEARFNDERLFGKTYTKERRIRSKRDTTILLQGQEPDPCPDPGTTDTEN 133

Query: 375 SGTIFESI 398
            GT  ESI
Sbjct: 134 IGTNSESI 141


>ref|XP_021910442.1| DNA replication complex GINS protein PSF2 isoform X1 [Carica
           papaya]
          Length = 210

 Score = 70.1 bits (170), Expect = 7e-12
 Identities = 43/99 (43%), Positives = 54/99 (54%)
 Frame = +3

Query: 138 NIETGIFNLDNLNMGDTRSILAHGHKTDTRIIREARFNDERLFGKTYTKKKQIQSKKDAA 317
           N++  I  +  +   + R  L   HK DT  +    F+DERLFGKTYTK+  IQSKKDA 
Sbjct: 4   NMKVSITLMMKIRWENMRPTLVPEHKKDTSEMDYTCFDDERLFGKTYTKRNSIQSKKDAT 63

Query: 318 VLPQGQESDPIPDPKNSENSGTIFESIHSESLPTPQEHP 434
           + PQ QE +PI   + SEN   I E    ES  T Q  P
Sbjct: 64  MSPQNQEFNPISGYEESENLTNILEG-ERESQVTFQALP 101


>gb|PON38652.1| hypothetical protein PanWU01x14_311080 [Parasponia andersonii]
          Length = 276

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 55/158 (34%), Positives = 74/158 (46%), Gaps = 20/158 (12%)
 Frame = +3

Query: 3   KYFVTMDVTFFESQSFF-NPPLQGGKEYED---SVFELNVS-TNDSDGKTNI--ETGIFN 161
           K FV+MDVTFFE QS++ N  LQG    ED     F+L++  TND   +T +  E+   N
Sbjct: 78  KMFVSMDVTFFEGQSYYHNSHLQGESSSEDVFLDGFDLSIEFTNDDSLQTQVFNESKEEN 137

Query: 162 LDNLNM-GDTRSILAHGHKTDTRIIREARFNDERLFGKTYTKKKQIQSKKDAAVLPQGQE 338
            + LN   + +  L      +T    E   N++R  G  Y+K+ Q Q KK   +L   QE
Sbjct: 138 ANKLNFENNEQPSLLPFQNQNTDQNTETEINEKRYKGLVYSKEYQAQKKK-GTILKHSQE 196

Query: 339 SD------------PIPDPKNSENSGTIFESIHSESLP 416
           SD             IPD   S NS    ES +   LP
Sbjct: 197 SDLRLDQDDKNDLSKIPDDNPSGNS----ESSNQLDLP 230


>gb|KZV54069.1| Beta-galactosidase [Dorcoceras hygrometricum]
          Length = 870

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 39/104 (37%), Positives = 57/104 (54%)
 Frame = +3

Query: 9   FVTMDVTFFESQSFFNPPLQGGKEYEDSVFELNVSTNDSDGKTNIETGIFNLDNLNMGDT 188
           FV++DVTF ESQ FF+ PLQG   +EDS F L+     S+ +    +  F +      D 
Sbjct: 701 FVSLDVTFCESQQFFSTPLQGAHTWEDS-FVLDSQNEHSENEKGNPSSEFRITL----DD 755

Query: 189 RSILAHGHKTDTRIIREARFNDERLFGKTYTKKKQIQSKKDAAV 320
            +  A     DTR     R  D++LFG+ Y +++Q QS++D AV
Sbjct: 756 ATQAAPQQNLDTR----TRGGDDKLFGQVY-RRRQTQSEEDPAV 794


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