BLASTX nr result

ID: Rehmannia30_contig00034170 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00034170
         (464 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PON83310.1| Sieve element occlusion [Trema orientalis]              48   6e-06

>gb|PON83310.1| Sieve element occlusion [Trema orientalis]
          Length = 1158

 Score = 47.8 bits (112), Expect(2) = 6e-06
 Identities = 25/44 (56%), Positives = 27/44 (61%)
 Frame = +1

Query: 25   FIGIWAVIRDSFDVIRACVARRIYGCFEVLAAEAITLREGLEFA 156
            FIG+ AVIRD F VI    +RRI G F    AE   LREGL FA
Sbjct: 1015 FIGVGAVIRDEFGVIHGAFSRRIQGNFGAYLAECSALREGLSFA 1058



 Score = 29.6 bits (65), Expect(2) = 6e-06
 Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
 Frame = +2

Query: 176  ISQVETDS*VLARSCAASELVRGD---EIRWVIADIVNLLNQGGSPISCSFVPGECNGVA 346
            IS VETDS    R+  A+  V      EI  +++D+ +LL Q G+ +SC F+  + N VA
Sbjct: 1065 ISTVETDS----RNVVAAVRVHNYLALEIP-ILSDVCSLLFQLGN-VSCIFISRQANNVA 1118

Query: 347  HCL 355
            H L
Sbjct: 1119 HNL 1121


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