BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00033847
         (556 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN22421.1| 23S rRNA pseudouridine(955/2504/2580) synthase [H...   134   5e-35
gb|PIN17604.1| 23S rRNA pseudouridine(955/2504/2580) synthase [H...   134   1e-33
ref|XP_012831075.1| PREDICTED: RNA pseudouridine synthase 4, mit...   110   5e-25
ref|XP_020552921.1| RNA pseudouridine synthase 4, mitochondrial ...   108   1e-24
ref|XP_011092538.1| RNA pseudouridine synthase 4, mitochondrial ...   108   2e-24
gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Erythra...    96   9e-20
ref|XP_022896844.1| RNA pseudouridine synthase 4, mitochondrial ...    72   2e-11
gb|KZV33213.1| RNA pseudouridine synthase 4, mitochondrial-like ...    56   6e-06
ref|XP_019166408.1| PREDICTED: RNA pseudouridine synthase 4, mit...    56   8e-06

>gb|PIN22421.1| 23S rRNA pseudouridine(955/2504/2580) synthase [Handroanthus
           impetiginosus]
          Length = 297

 Score =  134 bits (336), Expect = 5e-35
 Identities = 62/85 (72%), Positives = 70/85 (82%)
 Frame = -2

Query: 258 MAERHFLRELFRQWRPNAAASSFRGVLTKGTYEQQYYYSTATATNGENCEKEKNYNQWLI 79
           MAER  LRE+ R+WRPNAA S   G+LTK  YEQQY Y TATAT+GE CEKE+NY+QWLI
Sbjct: 1   MAERLILREMVRRWRPNAAPSGITGILTKEIYEQQYSYCTATATDGEKCEKERNYDQWLI 60

Query: 78  LPPFTPTADGSSIGKELYGRPADTN 4
           LPPFTP ADG SIGK+L G+PADTN
Sbjct: 61  LPPFTPAADGCSIGKKLSGQPADTN 85


>gb|PIN17604.1| 23S rRNA pseudouridine(955/2504/2580) synthase [Handroanthus
           impetiginosus]
          Length = 462

 Score =  134 bits (336), Expect = 1e-33
 Identities = 62/85 (72%), Positives = 70/85 (82%)
 Frame = -2

Query: 258 MAERHFLRELFRQWRPNAAASSFRGVLTKGTYEQQYYYSTATATNGENCEKEKNYNQWLI 79
           MAER  LRE+ R+WRPNAA S   G+LTK  YEQQY Y TATAT+GE CEKE+NY+QWLI
Sbjct: 1   MAERLILREMVRRWRPNAAPSGITGILTKEIYEQQYSYCTATATDGEKCEKERNYDQWLI 60

Query: 78  LPPFTPTADGSSIGKELYGRPADTN 4
           LPPFTP ADG SIGK+L G+PADTN
Sbjct: 61  LPPFTPAADGCSIGKKLSGQPADTN 85


>ref|XP_012831075.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
           [Erythranthe guttata]
          Length = 461

 Score =  110 bits (275), Expect = 5e-25
 Identities = 54/86 (62%), Positives = 60/86 (69%)
 Frame = -2

Query: 258 MAERHFLRELFRQWRPNAAASSFRGVLTKGTYEQQYYYSTATATNGENCEKEKNYNQWLI 79
           MAERH LR++FR  RP+AA S  RG+ TK   E   YY  ATA   ENCEKEKNY+QWL 
Sbjct: 1   MAERHLLRQMFRHLRPSAAVSGVRGMSTKAINEHTRYY--ATAATAENCEKEKNYDQWLT 58

Query: 78  LPPFTPTADGSSIGKELYGRPADTNT 1
           LPPF P ADG SIGK L G+PAD  T
Sbjct: 59  LPPFNPNADGCSIGKRLSGQPADAKT 84


>ref|XP_020552921.1| RNA pseudouridine synthase 4, mitochondrial isoform X2 [Sesamum
           indicum]
          Length = 431

 Score =  108 bits (271), Expect = 1e-24
 Identities = 51/76 (67%), Positives = 59/76 (77%)
 Frame = -2

Query: 231 LFRQWRPNAAASSFRGVLTKGTYEQQYYYSTATATNGENCEKEKNYNQWLILPPFTPTAD 52
           +FR WR NAAASS RG+LTK   EQQYY STA ATNGENC K KN ++WL+LPPF P  D
Sbjct: 1   MFRLWRHNAAASSVRGILTKTVSEQQYYCSTAAATNGENCGKGKNDSRWLMLPPFDPAVD 60

Query: 51  GSSIGKELYGRPADTN 4
           GSSIGK+L G P D++
Sbjct: 61  GSSIGKKLCGEPTDSS 76


>ref|XP_011092538.1| RNA pseudouridine synthase 4, mitochondrial isoform X1 [Sesamum
           indicum]
          Length = 454

 Score =  108 bits (271), Expect = 2e-24
 Identities = 51/76 (67%), Positives = 59/76 (77%)
 Frame = -2

Query: 231 LFRQWRPNAAASSFRGVLTKGTYEQQYYYSTATATNGENCEKEKNYNQWLILPPFTPTAD 52
           +FR WR NAAASS RG+LTK   EQQYY STA ATNGENC K KN ++WL+LPPF P  D
Sbjct: 1   MFRLWRHNAAASSVRGILTKTVSEQQYYCSTAAATNGENCGKGKNDSRWLMLPPFDPAVD 60

Query: 51  GSSIGKELYGRPADTN 4
           GSSIGK+L G P D++
Sbjct: 61  GSSIGKKLCGEPTDSS 76


>gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Erythranthe guttata]
          Length = 457

 Score = 95.9 bits (237), Expect = 9e-20
 Identities = 47/77 (61%), Positives = 52/77 (67%)
 Frame = -2

Query: 231 LFRQWRPNAAASSFRGVLTKGTYEQQYYYSTATATNGENCEKEKNYNQWLILPPFTPTAD 52
           +FR  RP+AA S  RG+ TK   E   YY  ATA   ENCEKEKNY+QWL LPPF P AD
Sbjct: 1   MFRHLRPSAAVSGVRGMSTKAINEHTRYY--ATAATAENCEKEKNYDQWLTLPPFNPNAD 58

Query: 51  GSSIGKELYGRPADTNT 1
           G SIGK L G+PAD  T
Sbjct: 59  GCSIGKRLSGQPADAKT 75


>ref|XP_022896844.1| RNA pseudouridine synthase 4, mitochondrial [Olea europaea var.
           sylvestris]
          Length = 464

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 42/81 (51%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
 Frame = -2

Query: 243 FLRELFRQWRPNAAASSFRGVLTKGTYEQQYYYSTATA--TNGENCEKEKNYNQWLILPP 70
           FL   FR WRP A A      +T   Y+ Q+Y++TAT   T+G N  +EK  NQWL LP 
Sbjct: 5   FLISKFR-WRPLAGAKK---TVTAAFYQLQHYHATATTINTDGGNTNEEKKTNQWLTLPA 60

Query: 69  FTPTADGSSIGKELYGRPADT 7
           FTPT DGSSI K L GR  DT
Sbjct: 61  FTPTVDGSSIAKLLSGRTPDT 81


>gb|KZV33213.1| RNA pseudouridine synthase 4, mitochondrial-like [Dorcoceras
           hygrometricum]
          Length = 469

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 33/75 (44%), Positives = 42/75 (56%)
 Frame = -2

Query: 258 MAERHFLRELFRQWRPNAAASSFRGVLTKGTYEQQYYYSTATATNGENCEKEKNYNQWLI 79
           +A R   R + R+ R +   +  RG LT    + QY  STA A +GE   +E    +WLI
Sbjct: 2   VAGRVLHRPILRRLRLSTDVACLRGTLTAVICQHQYLSSTALAADGEKSGQEGE-GKWLI 60

Query: 78  LPPFTPTADGSSIGK 34
           LPPFT  ADGS IGK
Sbjct: 61  LPPFTRFADGSEIGK 75


>ref|XP_019166408.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
           [Ipomoea nil]
 ref|XP_019166409.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
           [Ipomoea nil]
          Length = 469

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
 Frame = -2

Query: 258 MAERHFLRELFRQWRPNAAASSFRGVLTKGTYEQQYYYSTATATNGENCEKE--KNYNQW 85
           MAER  LR+     R   A       L+ G + ++ + +T  A  G   E E  K  ++W
Sbjct: 1   MAERSVLRQASVYCRRFIAVLGDENSLSSGFFLRRCHCATTMAQAGAEREGESAKRKDKW 60

Query: 84  LILPPFTPTADGSSIGKELYGRPADT 7
             LPP+TP+ DGS++GKEL GR +DT
Sbjct: 61  FTLPPYTPSIDGSALGKELAGRRSDT 86