BLASTX nr result
ID: Rehmannia30_contig00033741
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00033741
(500 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PIM99742.1| hypothetical protein CDL12_27754 [Handroanthus im... 124 1e-29
ref|XP_011081305.1| pentatricopeptide repeat-containing protein ... 122 6e-29
ref|XP_012854326.1| PREDICTED: pentatricopeptide repeat-containi... 118 1e-27
ref|XP_022852952.1| pentatricopeptide repeat-containing protein ... 86 2e-16
gb|PHT50478.1| hypothetical protein CQW23_10225 [Capsicum baccatum] 78 2e-13
ref|XP_009798649.1| PREDICTED: pentatricopeptide repeat-containi... 76 7e-13
gb|PHU20001.1| Pentatricopeptide repeat-containing protein, mito... 76 7e-13
ref|XP_006356289.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-12
emb|CDP12017.1| unnamed protein product [Coffea canephora] 75 1e-12
ref|XP_016502230.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-12
ref|XP_009600041.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-12
ref|XP_016548761.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 75 2e-12
gb|PHT83905.1| Pentatricopeptide repeat-containing protein, mito... 75 2e-12
ref|XP_019069133.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-12
ref|XP_010320032.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-12
ref|XP_015072090.1| PREDICTED: pentatricopeptide repeat-containi... 74 5e-12
ref|XP_015072088.1| PREDICTED: pentatricopeptide repeat-containi... 74 5e-12
ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containi... 72 2e-11
ref|XP_019190426.1| PREDICTED: pentatricopeptide repeat-containi... 71 3e-11
ref|XP_019230235.1| PREDICTED: pentatricopeptide repeat-containi... 70 5e-11
>gb|PIM99742.1| hypothetical protein CDL12_27754 [Handroanthus impetiginosus]
Length = 985
Score = 124 bits (310), Expect = 1e-29
Identities = 66/99 (66%), Positives = 76/99 (76%), Gaps = 1/99 (1%)
Frame = +1
Query: 202 MLPRLHIKPLRRNPNSSSLNHQLKFSTTQLVQDHKI-QSPLQELNFYNHLLKICLQECKK 378
M+ R H K R P S LNHQLKFSTTQLV+D +I +S QE N Y+HLLKICLQECKK
Sbjct: 1 MVLRFHNKLERLRPKPSFLNHQLKFSTTQLVKDPQIDKSSSQEDNLYSHLLKICLQECKK 60
Query: 379 IQSRQLFDRMPERLKLSLKTAKTIHGQSLRLGISTNGNL 495
IQSR FD+MPER SLKTAKTIH QS++ GIS++GNL
Sbjct: 61 IQSRHQFDQMPERRSFSLKTAKTIHAQSMKHGISSDGNL 99
>ref|XP_011081305.1| pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Sesamum indicum]
Length = 985
Score = 122 bits (305), Expect = 6e-29
Identities = 63/99 (63%), Positives = 76/99 (76%), Gaps = 1/99 (1%)
Frame = +1
Query: 202 MLPRLHIKPLRRNPNSSS-LNHQLKFSTTQLVQDHKIQSPLQELNFYNHLLKICLQECKK 378
ML R IK R NSS LN +LKFS T++V+D S QE N Y+HLLKICLQECKK
Sbjct: 1 MLSRFQIKNQRFKSNSSEFLNQELKFSATRIVKDQIHNSSAQERNLYSHLLKICLQECKK 60
Query: 379 IQSRQLFDRMPERLKLSLKTAKTIHGQSLRLGISTNGNL 495
IQSRQL DRMPERL LS+KTAKT+H +SL+LG+S++G+L
Sbjct: 61 IQSRQLLDRMPERLSLSVKTAKTVHARSLKLGVSSDGDL 99
>ref|XP_012854326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Erythranthe guttata]
Length = 985
Score = 118 bits (295), Expect = 1e-27
Identities = 64/99 (64%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Frame = +1
Query: 202 MLPRLHIKPLRRNPNSSSLNHQLKFSTTQLVQDHKI-QSPLQELNFYNHLLKICLQECKK 378
MLPR IK R NS + NHQLKFSTT LV+ + +SPLQEL FYN+LLKICLQECKK
Sbjct: 1 MLPRFRIKLQRLKSNSPTPNHQLKFSTTHLVEHPQTHRSPLQELYFYNNLLKICLQECKK 60
Query: 379 IQSRQLFDRMPERLKLSLKTAKTIHGQSLRLGISTNGNL 495
IQSRQ+ DRMP R SLKTAK IH + L GIS +G L
Sbjct: 61 IQSRQVLDRMPHRHSASLKTAKAIHTRVLTFGISKDGKL 99
>ref|XP_022852952.1| pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Olea europaea var. sylvestris]
Length = 979
Score = 85.9 bits (211), Expect = 2e-16
Identities = 49/104 (47%), Positives = 62/104 (59%)
Frame = +1
Query: 184 KLTFEPMLPRLHIKPLRRNPNSSSLNHQLKFSTTQLVQDHKIQSPLQELNFYNHLLKICL 363
+ TF LPRL NS LN L FSTT S +E + YN LL +CL
Sbjct: 2 RCTFRIKLPRLIA-------NSKLLNRHLNFSTTTAKGFQIYNSLTEEHSLYNSLLNMCL 54
Query: 364 QECKKIQSRQLFDRMPERLKLSLKTAKTIHGQSLRLGISTNGNL 495
Q+C+ +QS Q+F+ MP+RL LSLKT K +H SL+LGIS+ GNL
Sbjct: 55 QQCQIVQSCQVFEEMPKRLGLSLKTGKIVHALSLKLGISSKGNL 98
>gb|PHT50478.1| hypothetical protein CQW23_10225 [Capsicum baccatum]
Length = 1372
Score = 77.8 bits (190), Expect = 2e-13
Identities = 41/81 (50%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 LNHQLKFSTTQLVQDHKIQSP-LQELNFYNHLLKICLQECKKIQSRQLFDRMPERLKLSL 432
L H FS T I+ P YN+LLKICLQECK + SR LFD MP+R LS+
Sbjct: 19 LYHSRNFSATAPATLPGIEPPSAPTTRLYNNLLKICLQECKNLHSRHLFDEMPQRTSLSI 78
Query: 433 KTAKTIHGQSLRLGISTNGNL 495
K KTIH QSL+LG ++ G+L
Sbjct: 79 KACKTIHLQSLKLGFASQGHL 99
>ref|XP_009798649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Nicotiana sylvestris]
ref|XP_016495793.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Nicotiana tabacum]
Length = 1037
Score = 75.9 bits (185), Expect = 7e-13
Identities = 43/96 (44%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = +1
Query: 214 LHIKPLRRNPNSSSLNHQLKFSTTQ--LVQDHKIQSPLQELNFYNHLLKICLQECKKIQS 387
L + PLR++ S L+++ KFS TQ + + + SP + YN+LLKIC QECKK+QS
Sbjct: 7 LKLFPLRKH--SLLLHNRCKFSATQPRIESPNPLSSP--SILLYNNLLKICHQECKKLQS 62
Query: 388 RQLFDRMPERLKLSLKTAKTIHGQSLRLGISTNGNL 495
R +FD P++ + K KTIH QSL+ GI++ G+L
Sbjct: 63 RHVFDEFPQKAACASKACKTIHVQSLKHGIASQGHL 98
>gb|PHU20001.1| Pentatricopeptide repeat-containing protein, mitochondrial
[Capsicum chinense]
Length = 1057
Score = 75.9 bits (185), Expect = 7e-13
Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Frame = +1
Query: 184 KLTFEPMLPRLHIKPLRRNPNSSSLNHQLKFSTTQLVQDHKIQSPLQELNF-YNHLLKIC 360
++ F M R +K + L H FS T I+ P YN+LLKIC
Sbjct: 10 QIEFLSMRQRASLKLSPLTQHCPLLYHSRNFSATAPATLPGIEPPSAPTTLLYNNLLKIC 69
Query: 361 LQECKKIQSRQLFDRMPERLKLSLKTAKTIHGQSLRLGISTNGNL 495
LQECK + SR LFD MP+R S+K KTIH QSL+LG ++ G+L
Sbjct: 70 LQECKNLHSRHLFDEMPQRTSRSIKACKTIHLQSLQLGFASQGHL 114
>ref|XP_006356289.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Solanum tuberosum]
ref|XP_006356291.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Solanum tuberosum]
ref|XP_015168258.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Solanum tuberosum]
ref|XP_015168259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Solanum tuberosum]
ref|XP_015168260.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Solanum tuberosum]
Length = 1028
Score = 75.5 bits (184), Expect = 1e-12
Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Frame = +1
Query: 244 NSSSLNHQLKFSTTQLVQDHKIQSPLQELN----FYNHLLKICLQECKKIQSRQLFDRMP 411
+S L+ + KFS T + + + P + YN+LLKICLQECK +QSR++FD MP
Sbjct: 11 HSLLLHRRRKFSATAPAKQSRNEDPEPQSAPITLLYNNLLKICLQECKNLQSRRVFDEMP 70
Query: 412 ERLKLSLKTAKTIHGQSLRLGISTNGNL 495
+R ++K KTIH QSL+LG ++ G+L
Sbjct: 71 QRAARAVKACKTIHLQSLKLGFASQGHL 98
>emb|CDP12017.1| unnamed protein product [Coffea canephora]
Length = 1032
Score = 75.1 bits (183), Expect = 1e-12
Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Frame = +1
Query: 211 RLHIKPLRRNPNSSSLNHQLKFSTTQLVQDHKIQSP----LQELNFYNHLLKICLQECKK 378
R + LRR+ SSSL++ FS L + Q LQ Y +L+ CL+ECKK
Sbjct: 6 RFKLPQLRRS--SSSLHNHRNFSANPLRNLPQTQPSEPILLQSQEIYKLVLEKCLRECKK 63
Query: 379 IQSRQLFDRMPERLKLSLKTAKTIHGQSLRLGISTNGNL 495
+QSR+LFD MP++L SLK KTIH SL+LG ++ G+L
Sbjct: 64 VQSRRLFDEMPQKLICSLKAGKTIHSYSLKLGFASKGSL 102
>ref|XP_016502230.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Nicotiana tabacum]
Length = 1037
Score = 75.1 bits (183), Expect = 1e-12
Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = +1
Query: 214 LHIKPLRRNPNSSSLNHQLKFSTTQ--LVQDHKIQSPLQELNFYNHLLKICLQECKKIQS 387
L + PLR++ S L+++ KFS TQ + + SP L YN+LLKIC QECKK+QS
Sbjct: 7 LKLFPLRKH--SLLLHNRCKFSATQPRIENPKPLSSPSTLL--YNNLLKICQQECKKLQS 62
Query: 388 RQLFDRMPERLKLSLKTAKTIHGQSLRLGISTNGNL 495
R LFD +P++ + K K+IH QSL+ GI++ G+L
Sbjct: 63 RHLFDELPQKAARASKACKSIHVQSLKHGIASKGHL 98
>ref|XP_009600041.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Nicotiana tomentosiformis]
Length = 1037
Score = 75.1 bits (183), Expect = 1e-12
Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = +1
Query: 214 LHIKPLRRNPNSSSLNHQLKFSTTQ--LVQDHKIQSPLQELNFYNHLLKICLQECKKIQS 387
L + PLR++ S L+++ KFS TQ + + SP L YN+LLKIC QECKK+QS
Sbjct: 7 LKLFPLRKH--SLLLHNRCKFSATQPRIENPKPLSSPSTLL--YNNLLKICQQECKKLQS 62
Query: 388 RQLFDRMPERLKLSLKTAKTIHGQSLRLGISTNGNL 495
R LFD +P++ + K K+IH QSL+ GI++ G+L
Sbjct: 63 RHLFDELPQKAARASKACKSIHVQSLKHGIASKGHL 98
>ref|XP_016548761.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Capsicum annuum]
Length = 1022
Score = 74.7 bits (182), Expect = 2e-12
Identities = 40/81 (49%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 LNHQLKFSTTQLVQDHKIQSPLQELNF-YNHLLKICLQECKKIQSRQLFDRMPERLKLSL 432
L H FS T I+ P YN+LLKICLQECK + SR LFD MP+R S+
Sbjct: 19 LYHSRNFSATAPATLPGIEPPSAPTTLLYNNLLKICLQECKNLHSRHLFDEMPQRTSRSI 78
Query: 433 KTAKTIHGQSLRLGISTNGNL 495
K KTIH QSL+LG ++ G+L
Sbjct: 79 KACKTIHLQSLQLGFASQGHL 99
>gb|PHT83905.1| Pentatricopeptide repeat-containing protein, mitochondrial
[Capsicum annuum]
Length = 1042
Score = 74.7 bits (182), Expect = 2e-12
Identities = 40/81 (49%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 LNHQLKFSTTQLVQDHKIQSPLQELNF-YNHLLKICLQECKKIQSRQLFDRMPERLKLSL 432
L H FS T I+ P YN+LLKICLQECK + SR LFD MP+R S+
Sbjct: 19 LYHSRNFSATAPATLPGIEPPSAPTTLLYNNLLKICLQECKNLHSRHLFDEMPQRTSRSI 78
Query: 433 KTAKTIHGQSLRLGISTNGNL 495
K KTIH QSL+LG ++ G+L
Sbjct: 79 KACKTIHLQSLQLGFASQGHL 99
>ref|XP_019069133.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial isoform X2 [Solanum lycopersicum]
Length = 996
Score = 74.3 bits (181), Expect = 2e-12
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
Frame = +1
Query: 256 LNHQLKFSTTQLVQDHKIQSPLQELN----FYNHLLKICLQECKKIQSRQLFDRMPERLK 423
L+ + KFS T + + + P + Y++LLKICLQECK +QSR++FD MP+R+
Sbjct: 15 LHRRRKFSATTQAKQSRNEDPEPQSAPVTLLYDNLLKICLQECKNLQSRRVFDEMPQRVA 74
Query: 424 LSLKTAKTIHGQSLRLGISTNGNL 495
++K KTIH QSL+LG ++ G+L
Sbjct: 75 RAVKACKTIHLQSLKLGFASQGHL 98
>ref|XP_010320032.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial isoform X1 [Solanum lycopersicum]
ref|XP_010320033.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial isoform X1 [Solanum lycopersicum]
ref|XP_019069132.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial isoform X1 [Solanum lycopersicum]
Length = 1021
Score = 74.3 bits (181), Expect = 2e-12
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
Frame = +1
Query: 256 LNHQLKFSTTQLVQDHKIQSPLQELN----FYNHLLKICLQECKKIQSRQLFDRMPERLK 423
L+ + KFS T + + + P + Y++LLKICLQECK +QSR++FD MP+R+
Sbjct: 15 LHRRRKFSATTQAKQSRNEDPEPQSAPVTLLYDNLLKICLQECKNLQSRRVFDEMPQRVA 74
Query: 424 LSLKTAKTIHGQSLRLGISTNGNL 495
++K KTIH QSL+LG ++ G+L
Sbjct: 75 RAVKACKTIHLQSLKLGFASQGHL 98
>ref|XP_015072090.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial isoform X2 [Solanum pennellii]
Length = 1003
Score = 73.6 bits (179), Expect = 5e-12
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Frame = +1
Query: 256 LNHQLKFSTTQLVQDHKIQSPLQELN----FYNHLLKICLQECKKIQSRQLFDRMPERLK 423
L+ + KFS T + + + P + Y++LLKICLQECK +QSR++FD MP+R
Sbjct: 15 LHRRRKFSATTQAKQSRNEDPEPQSAPVTLLYDNLLKICLQECKNLQSRRVFDEMPQRAA 74
Query: 424 LSLKTAKTIHGQSLRLGISTNGNL 495
++K KTIH QSL+LG ++ G+L
Sbjct: 75 RAVKACKTIHLQSLKLGFASQGHL 98
>ref|XP_015072088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial isoform X1 [Solanum pennellii]
ref|XP_015072089.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial isoform X1 [Solanum pennellii]
Length = 1028
Score = 73.6 bits (179), Expect = 5e-12
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Frame = +1
Query: 256 LNHQLKFSTTQLVQDHKIQSPLQELN----FYNHLLKICLQECKKIQSRQLFDRMPERLK 423
L+ + KFS T + + + P + Y++LLKICLQECK +QSR++FD MP+R
Sbjct: 15 LHRRRKFSATTQAKQSRNEDPEPQSAPVTLLYDNLLKICLQECKNLQSRRVFDEMPQRAA 74
Query: 424 LSLKTAKTIHGQSLRLGISTNGNL 495
++K KTIH QSL+LG ++ G+L
Sbjct: 75 RAVKACKTIHLQSLKLGFASQGHL 98
>ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
emb|CBI19966.3| unnamed protein product, partial [Vitis vinifera]
Length = 1048
Score = 71.6 bits (174), Expect = 2e-11
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Frame = +1
Query: 244 NSSSLNHQLKFSTTQL----VQDHKIQSPLQELNFYNHLLKICLQECKKIQSRQLFDRMP 411
NS S +HQ FST Q +HKI + HLLKICLQ+C++I+ R FD P
Sbjct: 40 NSLSFHHQSNFSTIQRQVNQTSEHKI---------FTHLLKICLQQCQRIKIRHPFDETP 90
Query: 412 ERLKLSLKTAKTIHGQSLRLGISTNGNL 495
+RL + +T+KTIH Q+L+ G + G L
Sbjct: 91 QRLAQASRTSKTIHAQTLKFGFGSKGRL 118
>ref|XP_019190426.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Ipomoea nil]
Length = 1041
Score = 71.2 bits (173), Expect = 3e-11
Identities = 39/99 (39%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Frame = +1
Query: 202 MLPRL-HIKPLRRNPNSSSLNHQLKFSTTQLVQDHKIQSPLQELNFYNHLLKICLQECKK 378
+LPR+ + P +R + +++ T + D + QS E YNHLLK+CL +CK+
Sbjct: 14 ILPRIASLLPFQRRRSFAAV-------TASQILDREPQST-PENRIYNHLLKLCLLQCKQ 65
Query: 379 IQSRQLFDRMPERLKLSLKTAKTIHGQSLRLGISTNGNL 495
IQSR++FD MP+R++ + + K IHGQSL+ G ++ G L
Sbjct: 66 IQSRRIFDEMPQRVEFASRKCKIIHGQSLKHGFASEGFL 104
>ref|XP_019230235.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Nicotiana attenuata]
gb|OIT29563.1| pentatricopeptide repeat-containing protein, mitochondrial
[Nicotiana attenuata]
Length = 1037
Score = 70.5 bits (171), Expect = 5e-11
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Frame = +1
Query: 214 LHIKPLRRNPNSSSLNHQLKFSTTQ--LVQDHKIQSPLQELNFYNHLLKICLQECKKIQS 387
L + PLR++ S L+ + KFS TQ + + + SP + YN+LLKIC QECKK+QS
Sbjct: 7 LKLFPLRKH--SLLLHSRCKFSATQPRIENPNPLSSP--NILLYNNLLKICHQECKKLQS 62
Query: 388 RQLFDRMPERLKLSLKTAKTIHGQSLRLGISTNGNL 495
R + D +P++ + K KTIH QSL+ GI++ +L
Sbjct: 63 RHVLDELPQKAARASKACKTIHVQSLKHGIASQDHL 98