BLASTX nr result

ID: Rehmannia30_contig00031688 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00031688
         (530 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN09226.1| Leucine rich repeat protein [Handroanthus impetig...    67   1e-09
gb|PIN23995.1| Leucine rich repeat protein [Handroanthus impetig...    57   3e-06

>gb|PIN09226.1| Leucine rich repeat protein [Handroanthus impetiginosus]
          Length = 1020

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 32/47 (68%), Positives = 35/47 (74%)
 Frame = +2

Query: 389 MKIWCFPFLCFGEREEESVTSGNLYSFYCSNKGKEHIRNGDLGNVSE 529
           MKIWCFPF CFGEREE+S  S NLY  YC +KGKE +  G LGN SE
Sbjct: 1   MKIWCFPFPCFGEREEDSRASSNLY--YCVDKGKERMWEGVLGNESE 45


>gb|PIN23995.1| Leucine rich repeat protein [Handroanthus impetiginosus]
          Length = 1027

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
 Frame = +2

Query: 389 MKIWCFPFLCFGEREE--ESVTSGNLYSFYCSNKGKEHIRNGDLGNVSE 529
           MKI CFPF+ FGERE+     TS + Y  YC NKG+EH+R G LGN +E
Sbjct: 1   MKICCFPFVFFGEREKVPNIETSRDTYYLYCFNKGEEHMREGCLGNENE 49


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