BLASTX nr result

ID: Rehmannia30_contig00031055 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00031055
         (435 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN03883.1| hypothetical protein CDL12_23589 [Handroanthus im...    64   5e-09
ref|XP_020552356.1| transcription factor LHW-like [Sesamum indicum]    59   3e-07
ref|XP_020552358.1| transcription factor LHW isoform X2 [Sesamum...    58   7e-07
ref|XP_011088969.1| transcription factor LHW isoform X1 [Sesamum...    58   7e-07
gb|PIN10642.1| hypothetical protein CDL12_16763 [Handroanthus im...    55   6e-06

>gb|PIN03883.1| hypothetical protein CDL12_23589 [Handroanthus impetiginosus]
          Length = 895

 Score = 63.9 bits (154), Expect = 5e-09
 Identities = 32/49 (65%), Positives = 39/49 (79%), Gaps = 2/49 (4%)
 Frame = +2

Query: 2   EANTNITRMEVFLSLVRLLEQNAKTVAPQPN--SNDSMIV*EFHQATTV 142
           EAN ++TRME+FLSLVRLLEQNAK   P PN  SN + ++ EFHQAT+V
Sbjct: 839 EANRDVTRMEIFLSLVRLLEQNAKDTIPHPNNSSNKNTLIQEFHQATSV 887


>ref|XP_020552356.1| transcription factor LHW-like [Sesamum indicum]
          Length = 909

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 32/49 (65%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
 Frame = +2

Query: 2   EANTNITRMEVFLSLVRLLEQNAKTVAPQPN--SNDSMIV*EFHQATTV 142
           EAN ++TRME+FLSLVRLLEQNA    PQPN  S D+M V  FHQA +V
Sbjct: 848 EANRDVTRMEIFLSLVRLLEQNATADIPQPNDISCDNMRVQHFHQAASV 896


>ref|XP_020552358.1| transcription factor LHW isoform X2 [Sesamum indicum]
          Length = 952

 Score = 57.8 bits (138), Expect = 7e-07
 Identities = 28/49 (57%), Positives = 39/49 (79%), Gaps = 2/49 (4%)
 Frame = +2

Query: 2    EANTNITRMEVFLSLVRLLEQNAKTVAPQPN--SNDSMIV*EFHQATTV 142
            EAN ++TRME+F+SLVRLLEQ+AKT A QPN  S+++M   +FHQ  ++
Sbjct: 894  EANRDVTRMEIFISLVRLLEQSAKTSAAQPNGISSENMTTQQFHQVASI 942


>ref|XP_011088969.1| transcription factor LHW isoform X1 [Sesamum indicum]
          Length = 956

 Score = 57.8 bits (138), Expect = 7e-07
 Identities = 28/49 (57%), Positives = 39/49 (79%), Gaps = 2/49 (4%)
 Frame = +2

Query: 2    EANTNITRMEVFLSLVRLLEQNAKTVAPQPN--SNDSMIV*EFHQATTV 142
            EAN ++TRME+F+SLVRLLEQ+AKT A QPN  S+++M   +FHQ  ++
Sbjct: 898  EANRDVTRMEIFISLVRLLEQSAKTSAAQPNGISSENMTTQQFHQVASI 946


>gb|PIN10642.1| hypothetical protein CDL12_16763 [Handroanthus impetiginosus]
          Length = 897

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/49 (53%), Positives = 39/49 (79%), Gaps = 2/49 (4%)
 Frame = +2

Query: 2   EANTNITRMEVFLSLVRLLEQNAKTVAPQPN--SNDSMIV*EFHQATTV 142
           EAN ++TRME+F+SLV LLEQNAK+ A QPN  S+++++  +FHQ  ++
Sbjct: 839 EANRDVTRMEIFISLVHLLEQNAKSGAAQPNGISSENVMAQQFHQVASI 887


Top