BLASTX nr result

ID: Rehmannia30_contig00030741 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00030741
         (517 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012834777.1| PREDICTED: transcription elongation factor s...    66   2e-09
gb|EYU39646.1| hypothetical protein MIMGU_mgv1a000183mg [Erythra...    66   2e-09
gb|PIN24453.1| RNA polymerase II transcription elongation factor...    66   3e-09
ref|XP_011094503.1| protein RNA-directed DNA methylation 3 [Sesa...    65   7e-09
ref|XP_022854124.1| protein RNA-directed DNA methylation 3 [Olea...    55   1e-05

>ref|XP_012834777.1| PREDICTED: transcription elongation factor spt5 [Erythranthe
           guttata]
          Length = 1464

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 6/80 (7%)
 Frame = -3

Query: 512 KVPHVPFLPKEKEMSKEELERMMAERHKSGAGFVTYMEDFCGNESDKIDAIMEHKLKKKN 333
           K PH+PF+PKE+EMS+EELE+M+ ER+K GAGFVTY ED  G E  K    ++  +   +
Sbjct: 83  KFPHLPFIPKEEEMSEEELEKMLEERYKPGAGFVTYSED--GYEHKK---SIDKNIFVPS 137

Query: 332 DREPR------QAGRSKRSS 291
           D++P+        GR + S+
Sbjct: 138 DKDPQIWKVKCMVGRERHSA 157


>gb|EYU39646.1| hypothetical protein MIMGU_mgv1a000183mg [Erythranthe guttata]
          Length = 1476

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 6/80 (7%)
 Frame = -3

Query: 512 KVPHVPFLPKEKEMSKEELERMMAERHKSGAGFVTYMEDFCGNESDKIDAIMEHKLKKKN 333
           K PH+PF+PKE+EMS+EELE+M+ ER+K GAGFVTY ED  G E  K    ++  +   +
Sbjct: 83  KFPHLPFIPKEEEMSEEELEKMLEERYKPGAGFVTYSED--GYEHKK---SIDKNIFVPS 137

Query: 332 DREPR------QAGRSKRSS 291
           D++P+        GR + S+
Sbjct: 138 DKDPQIWKVKCMVGRERHSA 157


>gb|PIN24453.1| RNA polymerase II transcription elongation factor DSIF/SUPT5H/SPT5
           [Handroanthus impetiginosus]
          Length = 1742

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 29/45 (64%), Positives = 38/45 (84%)
 Frame = -3

Query: 512 KVPHVPFLPKEKEMSKEELERMMAERHKSGAGFVTYMEDFCGNES 378
           KVP +PF+PKE+EMS+EELERM+ ER+K GAGFVTY +D+   +S
Sbjct: 84  KVPQLPFVPKEEEMSEEELERMLEERYKPGAGFVTYADDYENKKS 128


>ref|XP_011094503.1| protein RNA-directed DNA methylation 3 [Sesamum indicum]
 ref|XP_011094504.1| protein RNA-directed DNA methylation 3 [Sesamum indicum]
          Length = 1720

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = -3

Query: 512 KVPHVPFLPKEKEMSKEELERMMAERHKSGAGFVTYMED 396
           KVP +PF+PKE+EMS+EELERM  ER+K GAGFVTY ED
Sbjct: 83  KVPDLPFIPKEEEMSEEELERMFEERYKPGAGFVTYAED 121


>ref|XP_022854124.1| protein RNA-directed DNA methylation 3 [Olea europaea var.
           sylvestris]
 ref|XP_022854125.1| protein RNA-directed DNA methylation 3 [Olea europaea var.
           sylvestris]
 ref|XP_022854126.1| protein RNA-directed DNA methylation 3 [Olea europaea var.
           sylvestris]
          Length = 1544

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = -3

Query: 512 KVPHVPFLPKEKEMSKEELERMMAERHKSGAGFVTYMED 396
           K P  P  PKE+EMS+EELERM+ ER+K+G+ FVTY ED
Sbjct: 86  KPPQYPCFPKEEEMSEEELERMLEERYKTGSTFVTYAED 124


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