BLASTX nr result

ID: Rehmannia30_contig00030678 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00030678
         (416 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN08658.1| hypothetical protein CDL12_18767 [Handroanthus im...    40   1e-06

>gb|PIN08658.1| hypothetical protein CDL12_18767 [Handroanthus impetiginosus]
          Length = 360

 Score = 40.0 bits (92), Expect(2) = 1e-06
 Identities = 21/31 (67%), Positives = 22/31 (70%)
 Frame = +2

Query: 161 VTWNDDVLT*ILLWLPTKFLTRIKLVCKHRL 253
           V  NDD+LT ILL LPTK L R K VCKH L
Sbjct: 2   VAQNDDLLTEILLKLPTKSLIRFKSVCKHWL 32



 Score = 39.7 bits (91), Expect(2) = 1e-06
 Identities = 20/32 (62%), Positives = 21/32 (65%)
 Frame = +3

Query: 282 LLTLRHPKPGPSLILHTRTSQFFYFDQILYTE 377
           L  LRHPKP PSLIL   TSQ FY   IL T+
Sbjct: 43  LHALRHPKPQPSLILSAHTSQHFYLRPILGTK 74