BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00030232
         (498 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX96430.1| retrovirus-related Pol polyprotein from transposo...    65   4e-09
emb|CAN78557.1| hypothetical protein VITISV_010019 [Vitis vinifera]    49   1e-08

>gb|PNX96430.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 1101

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
 Frame = +3

Query: 3    KNFTWEVIELPPRENTIGCKWFFLKMYKLEKLLICTKLNL*PRETPEDMGV-ISSDLCPM 179
            KN TW++++LPP + T+GCKW F   +K +  +   K  L  +   +  GV       P+
Sbjct: 723  KNDTWDLVQLPPGKKTVGCKWVFTIKHKPDGTIERYKARLVAKGYTQSYGVDYQETFAPV 782

Query: 180  WQDEKC*VTFPLLLLSLTGH*DNLI*RNKNVILHDELIKEVFRDPPPGFTPKKGKDLL*Y 359
                K      LL L+   +   L    KN  LH ++I+E++ DPPPG     G ++   
Sbjct: 783  ---AKLNTVRILLSLAANQNWPLLQFDVKNAFLHGDIIEEIYMDPPPGTKHTTGMEVCKL 839

Query: 360  AS*RLGLKQSLRERFG 407
                 GLKQS R  FG
Sbjct: 840  KKALYGLKQSPRAWFG 855


>emb|CAN78557.1| hypothetical protein VITISV_010019 [Vitis vinifera]
          Length = 1348

 Score = 49.3 bits (116), Expect(2) = 1e-08
 Identities = 26/60 (43%), Positives = 34/60 (56%)
 Frame = +2

Query: 95  TVDMYKAKFVAKGNTRRYGSHIK*PLPYVARRKVLSDIPPLALILDWPLRQFDMKKQECH 274
           TV+ YKA+ VAKG T+ YG   +     VA+   +  +  LA  LDWPL QFD+K    H
Sbjct: 682 TVEHYKARLVAKGFTQTYGVDYQETFSPVAKLNTVRGLLSLAANLDWPLHQFDVKNAFLH 741



 Score = 37.7 bits (86), Expect(2) = 1e-08
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +3

Query: 3   KNFTWEVIELPPRENTIGCKWFFLKMYKLE 92
           KN TW ++ LP    T+GCKW F   YK++
Sbjct: 651 KNKTWILVNLPKGHKTVGCKWVFSIKYKVD 680