BLASTX nr result

ID: Rehmannia30_contig00028515 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00028515
         (743 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygro...    51   3e-11
gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit ...    48   3e-10
gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit ...    47   2e-07

>gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygrometricum]
          Length = 250

 Score = 51.2 bits (121), Expect(2) = 3e-11
 Identities = 25/52 (48%), Positives = 36/52 (69%)
 Frame = +3

Query: 501 TRYKIIFHGKSHVVEIQDASFPRLMYNFKSFAKLSDVQKVDETVLFGMKNMF 656
           ++YKI F  K+HV EI D SFP +M++FKSF  + + + +DET+LFG    F
Sbjct: 79  SKYKINFITKTHVCEIFDDSFPSMMFDFKSFTNVKNAE-IDETMLFGEPTEF 129



 Score = 45.4 bits (106), Expect(2) = 3e-11
 Identities = 29/100 (29%), Positives = 44/100 (44%)
 Frame = +2

Query: 203 KWILKLRLIRMFEKPGFNDHANITSLECIFHDSEVFLIFFF*LMKRSITEFKLSHTSXXX 382
           +W LKLRL+R +E   +  + + T LEC+ HD E                          
Sbjct: 2   QWTLKLRLVRCYELAAYGKNGDFT-LECVLHDKE-------------------------- 34

Query: 383 XXWQGDRIQGSIKKANVAQFKKIFVEE*IYGIKDFVVSYN 502
               GDRI  S+KK  + + K I  E  ++ IK+ +V+ N
Sbjct: 35  ----GDRIHASVKKPVLDRVKPILKEGHLFAIKNIIVAEN 70


>gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit B-like [Dorcoceras
           hygrometricum]
          Length = 161

 Score = 47.8 bits (112), Expect(2) = 3e-10
 Identities = 29/100 (29%), Positives = 45/100 (45%)
 Frame = +2

Query: 203 KWILKLRLIRMFEKPGFNDHANITSLECIFHDSEVFLIFFF*LMKRSITEFKLSHTSXXX 382
           +W LKLRL+R +E P +    + T LEC+FHD E                          
Sbjct: 2   QWALKLRLVRCYELPAYEKSGDFT-LECVFHDKE-------------------------- 34

Query: 383 XXWQGDRIQGSIKKANVAQFKKIFVEE*IYGIKDFVVSYN 502
               GDRI  S+KK  + + + I  +  ++ IK+ +V+ N
Sbjct: 35  ----GDRIHASVKKPVLDKVRHILKDGHLFAIKNIIVAEN 70



 Score = 45.8 bits (107), Expect(2) = 3e-10
 Identities = 22/46 (47%), Positives = 34/46 (73%)
 Frame = +3

Query: 501 TRYKIIFHGKSHVVEIQDASFPRLMYNFKSFAKLSDVQKVDETVLF 638
           ++YKI F  K+HV EI D SFP +M++FKSF  + + + ++ET+LF
Sbjct: 79  SKYKINFITKTHVCEIFDDSFPSIMFDFKSFNDVKNAE-IEETMLF 123


>gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit [Dorcoceras
           hygrometricum]
          Length = 388

 Score = 47.0 bits (110), Expect(2) = 2e-07
 Identities = 22/46 (47%), Positives = 34/46 (73%)
 Frame = +3

Query: 501 TRYKIIFHGKSHVVEIQDASFPRLMYNFKSFAKLSDVQKVDETVLF 638
           ++YKI F  K+HV EI D SFP +M++FKSF  + + + ++ET+LF
Sbjct: 159 SKYKINFITKTHVCEIFDDSFPSMMFDFKSFTNVKNAE-IEETMLF 203



 Score = 36.6 bits (83), Expect(2) = 2e-07
 Identities = 26/94 (27%), Positives = 43/94 (45%)
 Frame = +2

Query: 221 RLIRMFEKPGFNDHANITSLECIFHDSEVFLIFFF*LMKRSITEFKLSHTSXXXXXWQGD 400
           +L+R +E P +    + T LEC+ HD E   I     +K+ + +              GD
Sbjct: 73  KLVRCYELPAYRKSGDFT-LECVLHDKEGDRIHAS--IKKPVLD-------------SGD 116

Query: 401 RIQGSIKKANVAQFKKIFVEE*IYGIKDFVVSYN 502
            I  SIKK  +   + I  E  ++ IK+ +V+ N
Sbjct: 117 HIHASIKKPVLDSVRPILKEGHLFAIKNIIVAEN 150


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