BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00026981
         (466 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ALT31538.1| mediator of RNA polymerase II transcription subun...   173   2e-51
ref|XP_011101344.1| probable mediator of RNA polymerase II trans...    88   5e-18
gb|PIN23159.1| hypothetical protein CDL12_04123 [Handroanthus im...    83   5e-16

>gb|ALT31538.1| mediator of RNA polymerase II transcription subunit 26-like
           protein, partial [Rehmannia glutinosa]
          Length = 250

 Score =  173 bits (438), Expect = 2e-51
 Identities = 83/87 (95%), Positives = 84/87 (96%)
 Frame = -1

Query: 466 NGDKKSPNEAHHDQSTHNGVKALTPPKEKLKHNQNESDKLGPSTKRPHDQSFQETQHAKK 287
           NGDKKSP EAHHDQSTHNGVKALTPPKEKLKHNQ ESDKLG STKRPHDQSFQETQHAKK
Sbjct: 164 NGDKKSPIEAHHDQSTHNGVKALTPPKEKLKHNQIESDKLGTSTKRPHDQSFQETQHAKK 223

Query: 286 QRTSEIMEFPNIPKIMKNSVVTNNGGS 206
           QRTSEIM+FPNIPKIMKNSVVTNNGGS
Sbjct: 224 QRTSEIMDFPNIPKIMKNSVVTNNGGS 250


>ref|XP_011101344.1| probable mediator of RNA polymerase II transcription subunit 26c
           [Sesamum indicum]
          Length = 289

 Score = 88.2 bits (217), Expect = 5e-18
 Identities = 51/99 (51%), Positives = 65/99 (65%), Gaps = 8/99 (8%)
 Frame = -1

Query: 466 NGDKKSPNEAHHDQSTHNGVKA--------LTPPKEKLKHNQNESDKLGPSTKRPHDQSF 311
           NGD+KS NEAH D+S  NGV+A        LTP K KL+H+Q ESDK G + KR   Q++
Sbjct: 200 NGDEKSINEAH-DRSIRNGVEAQNTSVSCCLTPSKAKLEHSQMESDKSGSAKKRLPHQNY 258

Query: 310 QETQHAKKQRTSEIMEFPNIPKIMKNSVVTNNGGSVPLK 194
           +ETQH KKQRTS+++ F NI         TNNG SVP++
Sbjct: 259 EETQHGKKQRTSKMINFHNI---------TNNGSSVPVR 288


>gb|PIN23159.1| hypothetical protein CDL12_04123 [Handroanthus impetiginosus]
          Length = 290

 Score = 82.8 bits (203), Expect = 5e-16
 Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 11/100 (11%)
 Frame = -1

Query: 460 DKKSPNEAHH----DQSTHNGVKA-------LTPPKEKLKHNQNESDKLGPSTKRPHDQS 314
           DKKSP+EAHH    D+  H+           LTP K K+KHNQ ES+K   +TK  HDQ+
Sbjct: 190 DKKSPHEAHHENIQDEVIHHADAQNTSVSCYLTPVKGKMKHNQIESEKPVLATKCLHDQN 249

Query: 313 FQETQHAKKQRTSEIMEFPNIPKIMKNSVVTNNGGSVPLK 194
           + E Q AKK +T+++  F NIPK  KN++V NNGG   +K
Sbjct: 250 YHEGQRAKKHKTAQVTNFHNIPK-TKNAIVMNNGGGFTMK 288