BLASTX nr result

ID: Rehmannia30_contig00026825 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00026825
         (969 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTG22967.1| hypothetical protein HannXRQ_Chr06g0177191 [Helia...    85   1e-14
gb|KZV45057.1| hypothetical protein F511_10374 [Dorcoceras hygro...    77   8e-13
gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus]             59   1e-05

>gb|OTG22967.1| hypothetical protein HannXRQ_Chr06g0177191 [Helianthus annuus]
          Length = 576

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
 Frame = -3

Query: 367 KEGELNLRPQTGKSKVQTDEIKISPMQ--VYQRQWEKLVTRQGI-NPEKTMVDISGKYPR 197
           KE   +  P TGKS    +  +  P Q    ++QW K+    G+ N +   +D +G +PR
Sbjct: 49  KEKSFSFFPNTGKSSTFKNIFQELPTQPNYVEQQWFKMKELYGLQNTDIRYIDFTGIFPR 108

Query: 196 VWMKPGSHPNEVQEWYTFGALASIYTVSPGFPEISKLPKWIGEAVYETWANNPHLARGDI 17
           +    G+ P E++ WY FGA+  IY   P FPEIS LPKW+ + V + + NNP +   D+
Sbjct: 109 INYLQGNSPEEIRYWYDFGAVNKIYLTLPDFPEISFLPKWVKDGVRDCYLNNPTITPKDV 168

Query: 16  LEL 8
           + L
Sbjct: 169 MAL 171


>gb|KZV45057.1| hypothetical protein F511_10374 [Dorcoceras hygrometricum]
          Length = 245

 Score = 77.4 bits (189), Expect = 8e-13
 Identities = 50/124 (40%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
 Frame = -3

Query: 523 RVRGSNPEVMDSSTIITSVAGDASPEGVQTVTNVEAPVXXXXXXXXXXXSGVKEGELNLR 344
           RV+GS P   DSST   S    +S + +    N E P            S ++E E+NLR
Sbjct: 15  RVQGSTPGAGDSSTPSKSAKSGSSCDELAQAKN-ETPDPCLDSSSQPFASWIEEEEINLR 73

Query: 343 PQT--GKSKVQTDEIKISPMQVYQRQWEKLVTRQGINPEKTMVDISGKYPRVWMKPGSHP 170
           PQT  GK+KV T+EI ISP +   R  +  +  Q  N     VDISGKY R+WM+P +HP
Sbjct: 74  PQTDKGKTKVDTNEIVISPFRFINRSGK--IEIQDRNSVTCRVDISGKYTRIWMRPNAHP 131

Query: 169 NEVQ 158
            +V+
Sbjct: 132 KDVK 135


>gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus]
          Length = 825

 Score = 58.5 bits (140), Expect = 1e-05
 Identities = 27/65 (41%), Positives = 41/65 (63%)
 Frame = -2

Query: 965 LFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQAECQYYDYDIVIIKSHENILAD 786
           ++L+  KF ++ DN +   FLK KI    ++ RL+RWQ     Y +DI  ++  +N+LAD
Sbjct: 754 IYLIPVKFLVRTDNRNFTYFLKTKISGDNKQGRLVRWQMWFSRYSFDIEHLEGPKNVLAD 813

Query: 785 FLTRD 771
           FLTRD
Sbjct: 814 FLTRD 818


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