BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00026676
         (484 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080439.1| protein PAF1 homolog [Sesamum indicum]             94   4e-19
gb|KZV50699.1| RNA polymerase II-associated factor 1 [Dorcoceras...    82   4e-15
gb|PIN12254.1| hypothetical protein CDL12_15135 [Handroanthus im...    78   3e-14
gb|PIN08057.1| putative RNA polymerase II regulator [Handroanthu...    78   9e-14
ref|XP_022885130.1| protein PAF1 homolog [Olea europaea var. syl...    67   5e-10
ref|XP_022843331.1| protein PAF1 homolog [Olea europaea var. syl...    65   2e-09
ref|XP_022885133.1| protein PAF1 homolog isoform X2 [Olea europa...    64   1e-08
ref|XP_022885132.1| protein PAF1 homolog isoform X1 [Olea europa...    64   1e-08

>ref|XP_011080439.1| protein PAF1 homolog [Sesamum indicum]
          Length = 698

 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 41/50 (82%), Positives = 44/50 (88%)
 Frame = +1

Query: 244 RGGSQYSQNWGPYSGNEGTTYNQNFSQTNPSSNYQLSGYGPSSSQPQHFN 393
           RG +QYSQNWGPYSGNEG+ YNQN+SQTNPSSNY  SGYG SSSQ QHFN
Sbjct: 38  RGSNQYSQNWGPYSGNEGSNYNQNYSQTNPSSNYPGSGYGSSSSQQQHFN 87


>gb|KZV50699.1| RNA polymerase II-associated factor 1 [Dorcoceras hygrometricum]
          Length = 697

 Score = 82.0 bits (201), Expect = 4e-15
 Identities = 35/49 (71%), Positives = 39/49 (79%)
 Frame = +1

Query: 247 GGSQYSQNWGPYSGNEGTTYNQNFSQTNPSSNYQLSGYGPSSSQPQHFN 393
           GG+QYSQNWGPY GN+G  YNQN+S +N SSNYQ SGYG SSS   HFN
Sbjct: 41  GGNQYSQNWGPYGGNDGPNYNQNYSLSNSSSNYQHSGYGSSSSSQHHFN 89


>gb|PIN12254.1| hypothetical protein CDL12_15135 [Handroanthus impetiginosus]
          Length = 294

 Score = 78.2 bits (191), Expect = 3e-14
 Identities = 32/42 (76%), Positives = 37/42 (88%)
 Frame = +1

Query: 268 NWGPYSGNEGTTYNQNFSQTNPSSNYQLSGYGPSSSQPQHFN 393
           NWGPYSGNEG+ YNQN+SQTNP+S YQLSGY  SS+Q QH+N
Sbjct: 39  NWGPYSGNEGSNYNQNYSQTNPASTYQLSGYASSSAQQQHYN 80


>gb|PIN08057.1| putative RNA polymerase II regulator [Handroanthus impetiginosus]
          Length = 683

 Score = 78.2 bits (191), Expect = 9e-14
 Identities = 32/42 (76%), Positives = 37/42 (88%)
 Frame = +1

Query: 268 NWGPYSGNEGTTYNQNFSQTNPSSNYQLSGYGPSSSQPQHFN 393
           NWGPYSGNEG+ YNQN+SQTNP+S YQLSGY  SS+Q QH+N
Sbjct: 39  NWGPYSGNEGSNYNQNYSQTNPASTYQLSGYASSSAQQQHYN 80


>ref|XP_022885130.1| protein PAF1 homolog [Olea europaea var. sylvestris]
 ref|XP_022885131.1| protein PAF1 homolog [Olea europaea var. sylvestris]
          Length = 684

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 31/48 (64%), Positives = 35/48 (72%)
 Frame = +1

Query: 250 GSQYSQNWGPYSGNEGTTYNQNFSQTNPSSNYQLSGYGPSSSQPQHFN 393
           G+   QNWG YSG EG+ YN N+SQ NPSSNYQ + YGPSS   QHFN
Sbjct: 38  GNPNPQNWGTYSGKEGSAYNHNYSQMNPSSNYQNACYGPSSQ--QHFN 83


>ref|XP_022843331.1| protein PAF1 homolog [Olea europaea var. sylvestris]
          Length = 371

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 29/47 (61%), Positives = 35/47 (74%)
 Frame = +1

Query: 250 GSQYSQNWGPYSGNEGTTYNQNFSQTNPSSNYQLSGYGPSSSQPQHF 390
           G+QY +NWGPY G EG+ YNQN++Q N SSNYQ +GY   SS  QHF
Sbjct: 38  GNQYPKNWGPYGGKEGSAYNQNYAQMNLSSNYQNAGY--RSSSQQHF 82


>ref|XP_022885133.1| protein PAF1 homolog isoform X2 [Olea europaea var. sylvestris]
          Length = 687

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 30/48 (62%), Positives = 35/48 (72%)
 Frame = +1

Query: 250 GSQYSQNWGPYSGNEGTTYNQNFSQTNPSSNYQLSGYGPSSSQPQHFN 393
           G+QY QNW   SG EG+ YNQNF+Q N SSNYQ +GYG  SS  QHF+
Sbjct: 37  GNQYPQNWDTSSGKEGSAYNQNFAQMNLSSNYQHAGYG--SSSQQHFS 82


>ref|XP_022885132.1| protein PAF1 homolog isoform X1 [Olea europaea var. sylvestris]
          Length = 688

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 30/48 (62%), Positives = 35/48 (72%)
 Frame = +1

Query: 250 GSQYSQNWGPYSGNEGTTYNQNFSQTNPSSNYQLSGYGPSSSQPQHFN 393
           G+QY QNW   SG EG+ YNQNF+Q N SSNYQ +GYG  SS  QHF+
Sbjct: 37  GNQYPQNWDTSSGKEGSAYNQNFAQMNLSSNYQHAGYG--SSSQQHFS 82