BLASTX nr result

ID: Rehmannia30_contig00026571 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00026571
         (690 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022150918.1| uncharacterized protein LOC111018954 [Momord...    50   6e-06

>ref|XP_022150918.1| uncharacterized protein LOC111018954 [Momordica charantia]
          Length = 1138

 Score = 50.4 bits (119), Expect(2) = 6e-06
 Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 11/109 (10%)
 Frame = +3

Query: 93  IRQNLQWHSGAIKSQTFGIGRAKKEVFQYVVDTAKRRICDDQSCFKL-----------VA 239
           I+  +  H    K++ F IG   KEV    V  A+   C   SCF+L            A
Sbjct: 561 IKDRVWKHLQGWKAKLFSIGG--KEVLIKAV--AQAIPCYTMSCFRLPKRLIREFHHITA 616

Query: 240 HFWWGSSSEGHGKILTVNWKAKAWPRQEGGLGFWDIDALMILFWKKQIW 386
            FWWGSS E   KI  V W +   P+ EGG+GF D++        KQ W
Sbjct: 617 RFWWGSSKEDK-KIHWVAWNSLYLPKCEGGMGFRDLELFNKALLAKQCW 664



 Score = 28.1 bits (61), Expect(2) = 6e-06
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +1

Query: 388 RLIEQPNLLVSNILKEYFFR*VLFQRIQFAGYDSFLSLSLM 510
           R++  PN ++S +LK  +F+   F   + +G  S++  S++
Sbjct: 665 RILNHPNSMLSRVLKGRYFKDCSFMEAKISGNPSYIWRSIL 705


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