BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00026383
         (431 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN14066.1| RNA polymerase III, second largest subunit [Handr...   115   4e-27
ref|XP_022895778.1| DNA-directed RNA polymerase III subunit 2 [O...   107   3e-24
ref|XP_011085923.1| DNA-directed RNA polymerase III subunit 2 [S...   101   5e-22
ref|XP_012849950.1| PREDICTED: DNA-directed RNA polymerase III s...    95   9e-20
ref|XP_022035620.1| DNA-directed RNA polymerase III subunit 2 [H...    85   2e-16
gb|KVH97879.1| DNA-directed RNA polymerase, subunit 2 [Cynara ca...    81   3e-16
gb|PPR83368.1| hypothetical protein GOBAR_AA37342 [Gossypium bar...    82   1e-15
ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s...    83   1e-15
gb|PHT63381.1| hypothetical protein T459_32745 [Capsicum annuum]       77   2e-15
gb|KHG28178.1| rpc2 [Gossypium arboreum]                               82   2e-15
gb|KHG28177.1| DNA-directed RNA polymerase III subunit RPC2 [Gos...    82   2e-15
ref|XP_022747869.1| DNA-directed RNA polymerase III subunit 2 is...    82   2e-15
ref|XP_017985036.1| PREDICTED: DNA-directed RNA polymerase III s...    82   2e-15
ref|XP_022747866.1| DNA-directed RNA polymerase III subunit 2 is...    82   2e-15
gb|EOY19613.1| DNA-directed RNA polymerase isoform 5 [Theobroma ...    82   2e-15
gb|EOY19610.1| DNA-directed RNA polymerase isoform 2 [Theobroma ...    82   2e-15
gb|EOY19614.1| DNA-directed RNA polymerase isoform 6 [Theobroma ...    82   2e-15
gb|EOY19612.1| DNA-directed RNA polymerase isoform 4 [Theobroma ...    82   2e-15
ref|XP_022747864.1| DNA-directed RNA polymerase III subunit 2 is...    82   3e-15
ref|XP_017611167.1| PREDICTED: DNA-directed RNA polymerase III s...    82   3e-15

>gb|PIN14066.1| RNA polymerase III, second largest subunit [Handroanthus
           impetiginosus]
          Length = 1153

 Score =  115 bits (289), Expect = 4e-27
 Identities = 56/63 (88%), Positives = 59/63 (93%)
 Frame = -1

Query: 191 MVVKEDDSALFNDLQENGLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYF 12
           MVV+EDD  LFNDLQE GLDIDKQALAAPVKNAV+KF L+PEFLKVRGLVKQHLDSFNYF
Sbjct: 1   MVVREDDPVLFNDLQEKGLDIDKQALAAPVKNAVDKFQLIPEFLKVRGLVKQHLDSFNYF 60

Query: 11  VRT 3
           VRT
Sbjct: 61  VRT 63


>ref|XP_022895778.1| DNA-directed RNA polymerase III subunit 2 [Olea europaea var.
           sylvestris]
 ref|XP_022895779.1| DNA-directed RNA polymerase III subunit 2 [Olea europaea var.
           sylvestris]
          Length = 1154

 Score =  107 bits (267), Expect = 3e-24
 Identities = 53/63 (84%), Positives = 58/63 (92%)
 Frame = -1

Query: 191 MVVKEDDSALFNDLQENGLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYF 12
           M VKE+DSAL NDLQE  L++DKQALAAPVK+AV+KF LLPEFLKVRGLVKQHLDSFNYF
Sbjct: 1   MGVKEEDSALLNDLQEQRLNVDKQALAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYF 60

Query: 11  VRT 3
           VRT
Sbjct: 61  VRT 63


>ref|XP_011085923.1| DNA-directed RNA polymerase III subunit 2 [Sesamum indicum]
          Length = 1152

 Score =  101 bits (251), Expect = 5e-22
 Identities = 52/63 (82%), Positives = 57/63 (90%)
 Frame = -1

Query: 191 MVVKEDDSALFNDLQENGLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYF 12
           MVV+E+D AL +DL+E  L IDKQALAAPVKNAV+KF LLPEFLKVRGLVKQHLDSFNYF
Sbjct: 1   MVVRENDPAL-SDLEEKSLGIDKQALAAPVKNAVDKFQLLPEFLKVRGLVKQHLDSFNYF 59

Query: 11  VRT 3
           VRT
Sbjct: 60  VRT 62


>ref|XP_012849950.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2
           [Erythranthe guttata]
          Length = 1153

 Score = 94.7 bits (234), Expect = 9e-20
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = -1

Query: 179 EDDSALFNDLQENGLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYFVRT 3
           +DD  L  DLQE G++IDKQ LAAPVK +V+KF LLPEFLKVRGLVKQHLDS+NYFVRT
Sbjct: 4   DDDLGLCTDLQEKGMEIDKQFLAAPVKTSVDKFQLLPEFLKVRGLVKQHLDSYNYFVRT 62


>ref|XP_022035620.1| DNA-directed RNA polymerase III subunit 2 [Helianthus annuus]
 gb|OTG29218.1| putative nuclear RNA polymerase C2 [Helianthus annuus]
          Length = 1143

 Score = 85.1 bits (209), Expect = 2e-16
 Identities = 42/58 (72%), Positives = 49/58 (84%)
 Frame = -1

Query: 176 DDSALFNDLQENGLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYFVRT 3
           +DSA+ +D   +   +DKQ LAAPVK+AV+KF LLPEFLKVRGLVKQHLDSFNYFVRT
Sbjct: 5   EDSAMPHDSLPSTAGVDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRT 62


>gb|KVH97879.1| DNA-directed RNA polymerase, subunit 2 [Cynara cardunculus var.
           scolymus]
          Length = 198

 Score = 81.3 bits (199), Expect = 3e-16
 Identities = 39/58 (67%), Positives = 48/58 (82%)
 Frame = -1

Query: 176 DDSALFNDLQENGLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYFVRT 3
           +DSA+ +   +    +DKQ LAAPVK+AV+KF LLPEFLKVRGLVKQHL+SFNYFV+T
Sbjct: 5   EDSAMLDASLQGSEGLDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLESFNYFVKT 62


>gb|PPR83368.1| hypothetical protein GOBAR_AA37342 [Gossypium barbadense]
          Length = 324

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
 Frame = -1

Query: 191 MVVKEDDSAL---FNDLQENGLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSF 21
           M +K++D+ L    N+L  + + +DKQ LAAP+K+ V+KF LLPEFLKVRGLVKQHLDSF
Sbjct: 1   MRLKQEDTLLNNNTNNLYMSEIPVDKQKLAAPIKSVVDKFQLLPEFLKVRGLVKQHLDSF 60

Query: 20  NYFVRT 3
           NYFV T
Sbjct: 61  NYFVNT 66


>ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit 2-like [Solanum
           tuberosum]
 ref|XP_006362215.1| PREDICTED: DNA-directed RNA polymerase III subunit 2-like [Solanum
           tuberosum]
          Length = 1153

 Score = 82.8 bits (203), Expect = 1e-15
 Identities = 38/57 (66%), Positives = 47/57 (82%)
 Frame = -1

Query: 173 DSALFNDLQENGLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYFVRT 3
           DS + N  +++   IDKQ LA+P+KN V+K+ L+PEFLKVRGLVKQHLDSFNYFVRT
Sbjct: 4   DSTMSNTTEDSNQGIDKQHLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRT 60


>gb|PHT63381.1| hypothetical protein T459_32745 [Capsicum annuum]
          Length = 116

 Score = 77.0 bits (188), Expect = 2e-15
 Identities = 35/57 (61%), Positives = 46/57 (80%)
 Frame = -1

Query: 173 DSALFNDLQENGLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFNYFVRT 3
           DS + ++       I+KQ LA+P+KN+V+K+ L+PEFLKVRGLVKQHLDSFNYFV+T
Sbjct: 6   DSTMSDETDNLSHGIEKQYLASPIKNSVDKYQLIPEFLKVRGLVKQHLDSFNYFVKT 62


>gb|KHG28178.1| rpc2 [Gossypium arboreum]
          Length = 533

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
 Frame = -1

Query: 191 MVVKEDDSAL---FNDLQENGLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSF 21
           M +K++D+ L    N+L  + + +DKQ LAAP+K+ V+KF LLPEFLKVRGLVKQHLDSF
Sbjct: 1   MRLKQEDTLLNNNTNNLYMSEIPVDKQKLAAPIKSVVDKFQLLPEFLKVRGLVKQHLDSF 60

Query: 20  NYFVRT 3
           NYFV T
Sbjct: 61  NYFVNT 66


>gb|KHG28177.1| DNA-directed RNA polymerase III subunit RPC2 [Gossypium arboreum]
          Length = 617

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
 Frame = -1

Query: 191 MVVKEDDSAL---FNDLQENGLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSF 21
           M +K++D+ L    N+L  + + +DKQ LAAP+K+ V+KF LLPEFLKVRGLVKQHLDSF
Sbjct: 1   MRLKQEDTLLNNNTNNLYMSEIPVDKQKLAAPIKSVVDKFQLLPEFLKVRGLVKQHLDSF 60

Query: 20  NYFVRT 3
           NYFV T
Sbjct: 61  NYFVNT 66


>ref|XP_022747869.1| DNA-directed RNA polymerase III subunit 2 isoform X6 [Durio
           zibethinus]
          Length = 823

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 43/65 (66%), Positives = 50/65 (76%), Gaps = 2/65 (3%)
 Frame = -1

Query: 191 MVVKEDDSALFNDLQEN--GLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFN 18
           M +K++D  L N    N   + IDKQ LAAP+K+AV+KF LLPEFLKVRGLVKQHLDSFN
Sbjct: 1   MGLKQEDLLLNNSSNWNVDEMPIDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFN 60

Query: 17  YFVRT 3
           YFV T
Sbjct: 61  YFVNT 65


>ref|XP_017985036.1| PREDICTED: DNA-directed RNA polymerase III subunit 2 isoform X2
           [Theobroma cacao]
          Length = 956

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
 Frame = -1

Query: 191 MVVKEDDSALFNDLQENGLD---IDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSF 21
           M +K++D  L N+   + +    +DKQ LAAP+K+AV+KF LLPEFLKVRGLVKQHLDSF
Sbjct: 1   MGLKQEDLLLNNNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSF 60

Query: 20  NYFVRT 3
           NYFV T
Sbjct: 61  NYFVNT 66


>ref|XP_022747866.1| DNA-directed RNA polymerase III subunit 2 isoform X4 [Durio
           zibethinus]
          Length = 959

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 43/65 (66%), Positives = 50/65 (76%), Gaps = 2/65 (3%)
 Frame = -1

Query: 191 MVVKEDDSALFNDLQEN--GLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFN 18
           M +K++D  L N    N   + IDKQ LAAP+K+AV+KF LLPEFLKVRGLVKQHLDSFN
Sbjct: 1   MGLKQEDLLLNNSSNWNVDEMPIDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFN 60

Query: 17  YFVRT 3
           YFV T
Sbjct: 61  YFVNT 65


>gb|EOY19613.1| DNA-directed RNA polymerase isoform 5 [Theobroma cacao]
          Length = 1006

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
 Frame = -1

Query: 191 MVVKEDDSALFNDLQENGLD---IDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSF 21
           M +K++D  L N+   + +    +DKQ LAAP+K+AV+KF LLPEFLKVRGLVKQHLDSF
Sbjct: 1   MGLKQEDLLLNNNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSF 60

Query: 20  NYFVRT 3
           NYFV T
Sbjct: 61  NYFVNT 66


>gb|EOY19610.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
          Length = 1011

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
 Frame = -1

Query: 191 MVVKEDDSALFNDLQENGLD---IDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSF 21
           M +K++D  L N+   + +    +DKQ LAAP+K+AV+KF LLPEFLKVRGLVKQHLDSF
Sbjct: 1   MGLKQEDLLLNNNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSF 60

Query: 20  NYFVRT 3
           NYFV T
Sbjct: 61  NYFVNT 66


>gb|EOY19614.1| DNA-directed RNA polymerase isoform 6 [Theobroma cacao]
          Length = 1034

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
 Frame = -1

Query: 191 MVVKEDDSALFNDLQENGLD---IDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSF 21
           M +K++D  L N+   + +    +DKQ LAAP+K+AV+KF LLPEFLKVRGLVKQHLDSF
Sbjct: 1   MGLKQEDLLLNNNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSF 60

Query: 20  NYFVRT 3
           NYFV T
Sbjct: 61  NYFVNT 66


>gb|EOY19612.1| DNA-directed RNA polymerase isoform 4 [Theobroma cacao]
          Length = 1034

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
 Frame = -1

Query: 191 MVVKEDDSALFNDLQENGLD---IDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSF 21
           M +K++D  L N+   + +    +DKQ LAAP+K+AV+KF LLPEFLKVRGLVKQHLDSF
Sbjct: 1   MGLKQEDLLLNNNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSF 60

Query: 20  NYFVRT 3
           NYFV T
Sbjct: 61  NYFVNT 66


>ref|XP_022747864.1| DNA-directed RNA polymerase III subunit 2 isoform X2 [Durio
           zibethinus]
          Length = 1130

 Score = 82.0 bits (201), Expect = 3e-15
 Identities = 43/65 (66%), Positives = 50/65 (76%), Gaps = 2/65 (3%)
 Frame = -1

Query: 191 MVVKEDDSALFNDLQEN--GLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSFN 18
           M +K++D  L N    N   + IDKQ LAAP+K+AV+KF LLPEFLKVRGLVKQHLDSFN
Sbjct: 1   MGLKQEDLLLNNSSNWNVDEMPIDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFN 60

Query: 17  YFVRT 3
           YFV T
Sbjct: 61  YFVNT 65


>ref|XP_017611167.1| PREDICTED: DNA-directed RNA polymerase III subunit 2-like isoform
           X3 [Gossypium arboreum]
          Length = 1131

 Score = 82.0 bits (201), Expect = 3e-15
 Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
 Frame = -1

Query: 191 MVVKEDDSAL---FNDLQENGLDIDKQALAAPVKNAVEKFHLLPEFLKVRGLVKQHLDSF 21
           M +K++D+ L    N+L  + + +DKQ LAAP+K+ V+KF LLPEFLKVRGLVKQHLDSF
Sbjct: 1   MRLKQEDTLLNNNTNNLYMSEIPVDKQKLAAPIKSVVDKFQLLPEFLKVRGLVKQHLDSF 60

Query: 20  NYFVRT 3
           NYFV T
Sbjct: 61  NYFVNT 66