BLASTX nr result

ID: Rehmannia30_contig00026081 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00026081
         (673 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011070115.1| vesicle-associated protein 1-4 [Sesamum indi...   102   6e-22
gb|PIN05391.1| VAMP-associated protein involved in inositol meta...   101   2e-21
gb|PIN05392.1| hypothetical protein CDL12_22066 [Handroanthus im...    57   3e-06

>ref|XP_011070115.1| vesicle-associated protein 1-4 [Sesamum indicum]
          Length = 354

 Score =  102 bits (253), Expect = 6e-22
 Identities = 65/124 (52%), Positives = 75/124 (60%), Gaps = 5/124 (4%)
 Frame = +1

Query: 1   IQSVVAPADATTEDVILD-MFDKARSPIEECALQVVYISNQEKNSNRXXXXXXXXXXXXX 177
           IQSV   A  TTED I D +FD AR PIEE  +QVVYI  QE  S               
Sbjct: 228 IQSVTLSAGTTTEDNIADAVFDGARFPIEEREMQVVYIPKQENKSADVAELILRGIVVSL 287

Query: 178 XXXVFGYLMKQTLSLIWSLAMLAVMLIIKMIKEVLSDSVEDLIVK----ICMHLVFRLKD 345
              V  YLMKQTLSLIWSLAM+  ML+ KMIK+++SDSVED IVK    I MHL+F  K+
Sbjct: 288 LGLVSCYLMKQTLSLIWSLAMVGTMLMFKMIKKLVSDSVEDWIVKTLLYIFMHLLFGRKE 347

Query: 346 GMRL 357
            + L
Sbjct: 348 NIHL 351


>gb|PIN05391.1| VAMP-associated protein involved in inositol metabolism
           [Handroanthus impetiginosus]
          Length = 406

 Score =  101 bits (251), Expect = 2e-21
 Identities = 64/126 (50%), Positives = 79/126 (62%), Gaps = 7/126 (5%)
 Frame = +1

Query: 1   IQSVVAPADATTEDVILDMFDKARSPIEECALQVVYISNQEKNSNRXXXXXXXXXXXXXX 180
           IQSVVA   ATTED+I DM D+A SPIEE  LQVV IS  E   +               
Sbjct: 278 IQSVVATTAATTEDLIHDMLDEASSPIEERELQVVCISKLENKGDCVDELILKGIIISLL 337

Query: 181 XXVFGYLMKQTLSLIWSLAMLAVMLIIKMIKEVLSDSVEDLIVK----ICMHLV---FRL 339
             V  YLMKQTLSLIWSL MLA+ML++KMIK+++S+S+ED +VK    I +H V   FR 
Sbjct: 338 GLVSCYLMKQTLSLIWSLTMLAIMLMMKMIKKLVSESLEDWVVKTLLSIILHFVQFLFRR 397

Query: 340 KDGMRL 357
           K+ + L
Sbjct: 398 KNNIGL 403


>gb|PIN05392.1| hypothetical protein CDL12_22066 [Handroanthus impetiginosus]
          Length = 221

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 18/136 (13%)
 Frame = +1

Query: 4   QSVVAPADATTEDVILDMFDKARSPIEECALQVVYISNQ-----------EKNSNRXXXX 150
           Q ++    ATT+++   MF+     ++   L V+Y++             ++N       
Sbjct: 85  QFLIQSTVATTKNITRQMFNSRTGTVDVFKLGVLYVTPTSLLYSKITDWLDENEGTFGGL 144

Query: 151 XXXXXXXXXXXXVFGYLMKQTLSLIWSLAMLAVMLIIKMIKEVLSDSVEDLIVK----IC 318
                       +F YLM + LSLIWSL  + +M +IKMIK  +SD VE  IVK    +C
Sbjct: 145 FMKGITIGLLFLMFWYLMMKLLSLIWSLTFVIMMFVIKMIKSEVSDKVEGWIVKCLATVC 204

Query: 319 MH---LVFRLKDGMRL 357
           +H   +VFR    M +
Sbjct: 205 IHFSYVVFRRVTNMSI 220


Top