BLASTX nr result
ID: Rehmannia30_contig00025431
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00025431
(693 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_001931961.1| replicase [Lamium leaf distortion virus] >gi... 91 3e-20
gb|AGQ49469.1| reverse transcriptase [Dahlia mosaic virus] 86 8e-20
gb|ABX80503.1| RdRp, partial [Carnation etched ring virus] 87 8e-20
gb|ADZ44590.1| polyprotein [Dahlia mosaic virus] 86 1e-19
gb|ABM97612.1| reverse transcriptase, partial [Dahlia mosaic virus] 87 1e-19
gb|AEA39176.1| polyprotein [Dahlia mosaic virus] 87 3e-19
gb|ABW80581.1| polyprotein [Dahlia mosaic virus] 84 4e-19
gb|ABX80504.1| RdRp, partial [Carnation etched ring virus] 84 7e-19
gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10] 84 8e-19
gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus] 82 1e-18
ref|NP_619548.1| unnamed protein product [Figwort mosaic virus] ... 87 1e-18
ref|XP_022023895.1| uncharacterized protein LOC110924145 [Helian... 82 2e-18
ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic prote... 84 4e-18
emb|CAH68829.1| polyprotein [Carnation etched ring virus] 80 7e-18
ref|YP_006607892.1| reverse transcriptase [Soybean Putnam virus]... 81 2e-17
dbj|BAO53393.1| reverse transcriptase [Cauliflower mosaic virus]... 81 3e-17
dbj|BAO53386.1| reverse transcriptase [Cauliflower mosaic virus] 81 3e-17
ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus] >... 84 3e-17
gb|AFI61742.1| reverse transcriptase [Cauliflower mosaic virus] 80 4e-17
gb|ATS17305.1| reverse transcriptase [Cauliflower mosaic virus] 80 6e-17
>ref|YP_001931961.1| replicase [Lamium leaf distortion virus]
gb|ACB69767.1| replicase [Lamium leaf distortion virus]
Length = 696
Score = 90.5 bits (223), Expect(2) = 3e-20
Identities = 42/76 (55%), Positives = 63/76 (82%)
Frame = +3
Query: 408 VQKVFDLNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVRVKPTIYSPK 587
++K+F+ +L+ SIIE+L+D+VCSENP+DP+K+K+ ++ASI+L+ PK +V+VKP Y+P+
Sbjct: 216 LKKLFEEDLKKKSIIEKLLDQVCSENPLDPLKTKKWMKASIKLIDPKTVVKVKPMRYNPQ 275
Query: 588 GREEITKQISELLELK 635
EE KQI ELLELK
Sbjct: 276 DVEEFAKQIKELLELK 291
Score = 36.6 bits (83), Expect(2) = 3e-20
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 634 KLISPSKFPHMSPAFLVENE 693
K+I PSK PH SPAFLVENE
Sbjct: 291 KIIIPSKSPHQSPAFLVENE 310
>gb|AGQ49469.1| reverse transcriptase [Dahlia mosaic virus]
Length = 814
Score = 86.3 bits (212), Expect(2) = 8e-20
Identities = 46/84 (54%), Positives = 58/84 (69%), Gaps = 5/84 (5%)
Frame = +3
Query: 399 TRVVQKV-----FDLNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVRV 563
T + Q+V F L +Q + IE L+++VCSENPIDP KSK + ASI L+ PK +VRV
Sbjct: 332 TNITQEVIKPERFFLEIQKYQKIEDLLEKVCSENPIDPEKSKYWMNASIELIDPKTVVRV 391
Query: 564 KPTIYSPKGREEITKQISELLELK 635
KP YSP+ REE KQI ELL+LK
Sbjct: 392 KPMKYSPQDREEFGKQIKELLDLK 415
Score = 39.3 bits (90), Expect(2) = 8e-20
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +1
Query: 634 KLISPSKFPHMSPAFLVENE 693
KLI PSK PHMSPAFLVENE
Sbjct: 415 KLIIPSKSPHMSPAFLVENE 434
>gb|ABX80503.1| RdRp, partial [Carnation etched ring virus]
Length = 393
Score = 86.7 bits (213), Expect(2) = 8e-20
Identities = 42/79 (53%), Positives = 57/79 (72%)
Frame = +3
Query: 399 TRVVQKVFDLNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVRVKPTIY 578
+ + + +++L + FS IE++++ V SENPIDP KSKQ + A+I L+ PK IV+VKP Y
Sbjct: 140 SNIEEHLYELQISKFSAIEEMLERVSSENPIDPEKSKQWMTATIELIDPKTIVKVKPMSY 199
Query: 579 SPKGREEITKQISELLELK 635
SP REE KQI ELLELK
Sbjct: 200 SPSDREEFDKQIKELLELK 218
Score = 38.9 bits (89), Expect(2) = 8e-20
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1
Query: 634 KLISPSKFPHMSPAFLVENE 693
K+I PSK PHMSPAFLVENE
Sbjct: 218 KVIKPSKSPHMSPAFLVENE 237
>gb|ADZ44590.1| polyprotein [Dahlia mosaic virus]
Length = 806
Score = 85.5 bits (210), Expect(2) = 1e-19
Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 5/84 (5%)
Frame = +3
Query: 399 TRVVQKV-----FDLNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVRV 563
T + Q+V F L ++ + IE+L+++VCSENPIDP KSK + ASI L+ PK ++RV
Sbjct: 324 TNITQEVIKPERFFLEIKKYQKIEELLEKVCSENPIDPEKSKCWMNASIELIDPKAVIRV 383
Query: 564 KPTIYSPKGREEITKQISELLELK 635
KP YSP+ REE KQI ELLELK
Sbjct: 384 KPMKYSPQDREEFGKQIKELLELK 407
Score = 39.3 bits (90), Expect(2) = 1e-19
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +1
Query: 634 KLISPSKFPHMSPAFLVENE 693
KLI PSK PHMSPAFLVENE
Sbjct: 407 KLIIPSKSPHMSPAFLVENE 426
>gb|ABM97612.1| reverse transcriptase, partial [Dahlia mosaic virus]
Length = 322
Score = 87.0 bits (214), Expect(2) = 1e-19
Identities = 45/84 (53%), Positives = 60/84 (71%), Gaps = 5/84 (5%)
Frame = +3
Query: 399 TRVVQKV-----FDLNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVRV 563
T + Q+V F L +Q + IE+L+++VCSENPIDP KSK + ASI L+ PK ++RV
Sbjct: 133 TNITQEVIKPERFFLEIQKYQKIEKLLEKVCSENPIDPEKSKYWMTASIELIDPKTVIRV 192
Query: 564 KPTIYSPKGREEITKQISELLELK 635
KP YSP+ REE +KQI ELL+LK
Sbjct: 193 KPMKYSPQDREEFSKQIKELLDLK 216
Score = 37.7 bits (86), Expect(2) = 1e-19
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +1
Query: 634 KLISPSKFPHMSPAFLVENE 693
KLI PSK PHMSPAFL ENE
Sbjct: 216 KLIIPSKSPHMSPAFLAENE 235
>gb|AEA39176.1| polyprotein [Dahlia mosaic virus]
Length = 808
Score = 87.0 bits (214), Expect(2) = 3e-19
Identities = 46/84 (54%), Positives = 59/84 (70%), Gaps = 5/84 (5%)
Frame = +3
Query: 399 TRVVQKV-----FDLNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVRV 563
T + Q+V F L +Q + IE+L+++VCSENPIDP KSK + ASI L+ PK +VRV
Sbjct: 326 TNITQEVIKPERFFLEIQKYQKIEELLEKVCSENPIDPEKSKYWMNASIELIDPKTVVRV 385
Query: 564 KPTIYSPKGREEITKQISELLELK 635
KP YSP+ REE KQI ELL+LK
Sbjct: 386 KPMKYSPQDREEFGKQIKELLDLK 409
Score = 36.6 bits (83), Expect(2) = 3e-19
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +1
Query: 634 KLISPSKFPHMSPAFLVENE 693
KLI PSK PHMSPAFLV NE
Sbjct: 409 KLIIPSKSPHMSPAFLVGNE 428
>gb|ABW80581.1| polyprotein [Dahlia mosaic virus]
Length = 812
Score = 84.0 bits (206), Expect(2) = 4e-19
Identities = 45/84 (53%), Positives = 57/84 (67%), Gaps = 5/84 (5%)
Frame = +3
Query: 399 TRVVQKV-----FDLNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVRV 563
T + Q+V F L +Q + IE L+++VC ENPIDP KSK + ASI L+ PK +VRV
Sbjct: 330 TNITQEVIKPERFFLEIQRYQKIEDLLEKVCFENPIDPEKSKYWMNASIELIDPKTVVRV 389
Query: 564 KPTIYSPKGREEITKQISELLELK 635
KP YSP+ REE KQI ELL+LK
Sbjct: 390 KPMKYSPQDREEFGKQIKELLDLK 413
Score = 39.3 bits (90), Expect(2) = 4e-19
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +1
Query: 634 KLISPSKFPHMSPAFLVENE 693
KLI PSK PHMSPAFLVENE
Sbjct: 413 KLIIPSKSPHMSPAFLVENE 432
>gb|ABX80504.1| RdRp, partial [Carnation etched ring virus]
Length = 394
Score = 83.6 bits (205), Expect(2) = 7e-19
Identities = 40/79 (50%), Positives = 56/79 (70%)
Frame = +3
Query: 399 TRVVQKVFDLNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVRVKPTIY 578
+ + + +++ + FS IE++++ V SENPIDP KSKQ + A+I L+ PK IV+VKP Y
Sbjct: 141 SNIEELCYEIQISKFSAIEEMLERVSSENPIDPEKSKQWMTATIELIDPKTIVKVKPMSY 200
Query: 579 SPKGREEITKQISELLELK 635
SP REE KQI ELL+LK
Sbjct: 201 SPSDREEFDKQIKELLDLK 219
Score = 38.9 bits (89), Expect(2) = 7e-19
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1
Query: 634 KLISPSKFPHMSPAFLVENE 693
K+I PSK PHMSPAFLVENE
Sbjct: 219 KVIKPSKSPHMSPAFLVENE 238
>gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10]
Length = 810
Score = 83.6 bits (205), Expect(2) = 8e-19
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 5/84 (5%)
Frame = +3
Query: 399 TRVVQKV-----FDLNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVRV 563
T + Q+V F L +Q + IE+L+++VCSENPIDP KS + ASI L+ PK ++R
Sbjct: 328 TNITQEVIKPERFFLEIQKYQKIEELLEKVCSENPIDPEKSNYWMNASIELIDPKTVIRE 387
Query: 564 KPTIYSPKGREEITKQISELLELK 635
KP YSP+ REE +KQI ELL+LK
Sbjct: 388 KPMKYSPQDREEFSKQIKELLDLK 411
Score = 38.5 bits (88), Expect(2) = 8e-19
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1
Query: 634 KLISPSKFPHMSPAFLVENE 693
K+I PSK PHMSPAFLVENE
Sbjct: 411 KIIIPSKSPHMSPAFLVENE 430
>gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus]
Length = 825
Score = 82.4 bits (202), Expect(2) = 1e-18
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +3
Query: 411 QKVFDLNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVRVKPTIYSPKG 590
++++ LQ + IE+L++ VCSENPIDP KSK + SI+L+ PK I+RVKP YSP+
Sbjct: 348 EEIYFRELQRYQKIEELLENVCSENPIDPNKSKNWMDGSIQLIDPKTIIRVKPMKYSPQD 407
Query: 591 REEITKQISELLELK 635
REE KQI +LL+LK
Sbjct: 408 REEFGKQIKKLLDLK 422
Score = 39.3 bits (90), Expect(2) = 1e-18
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +1
Query: 634 KLISPSKFPHMSPAFLVENE 693
KLI PSK PHMSPAFLVENE
Sbjct: 422 KLIIPSKSPHMSPAFLVENE 441
>ref|NP_619548.1| unnamed protein product [Figwort mosaic virus]
sp|P09523.1|POL_FMVD RecName: Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase
emb|CAA29527.1| unnamed protein product [Figwort mosaic virus]
Length = 666
Score = 87.4 bits (215), Expect(2) = 1e-18
Identities = 44/80 (55%), Positives = 59/80 (73%)
Frame = +3
Query: 393 KNTRVVQKVFDLNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVRVKPT 572
KN ++ + L + + IEQL+D+VCSENPIDPIKSKQ ++ASI+L+ P K++RVKP
Sbjct: 186 KNIINPEERYFLITEKYQKIEQLLDKVCSENPIDPIKSKQWMKASIKLIDPLKVIRVKPM 245
Query: 573 IYSPKGREEITKQISELLEL 632
YSP+ RE KQI ELL+L
Sbjct: 246 SYSPQDREGFAKQIKELLDL 265
Score = 34.3 bits (77), Expect(2) = 1e-18
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +1
Query: 637 LISPSKFPHMSPAFLVENE 693
LI PSK HMSPAFLVENE
Sbjct: 267 LIIPSKSQHMSPAFLVENE 285
>ref|XP_022023895.1| uncharacterized protein LOC110924145 [Helianthus annuus]
ref|XP_022025011.1| uncharacterized protein LOC110925365 [Helianthus annuus]
Length = 243
Score = 82.0 bits (201), Expect(2) = 2e-18
Identities = 39/76 (51%), Positives = 57/76 (75%)
Frame = +3
Query: 408 VQKVFDLNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVRVKPTIYSPK 587
V+++F + +Q F IE+L+++VC NPI+ KSK+ ++ASI L+ PK ++RVKP YSP+
Sbjct: 73 VERIFLVEIQKFQKIEELLEKVCLGNPINSEKSKKWMKASIELIDPKTVIRVKPMKYSPQ 132
Query: 588 GREEITKQISELLELK 635
REE KQI ELL+LK
Sbjct: 133 DREEFNKQIKELLDLK 148
Score = 38.9 bits (89), Expect(2) = 2e-18
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1
Query: 634 KLISPSKFPHMSPAFLVENE 693
KL+ PSK PHMSPAFLVENE
Sbjct: 148 KLVIPSKSPHMSPAFLVENE 167
>ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease;
Reverse transcriptase] [Carnation etched ring virus]
sp|P05400.1|POL_CERV RecName: Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase
emb|CAA28360.1| unnamed protein product [Carnation etched ring virus]
prf||1301227E ORF 5
Length = 659
Score = 84.0 bits (206), Expect(2) = 4e-18
Identities = 40/77 (51%), Positives = 56/77 (72%)
Frame = +3
Query: 405 VVQKVFDLNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVRVKPTIYSP 584
V + ++++ + FS IE++++ V SENPIDP KSKQ + A+I L+ PK +V+VKP YSP
Sbjct: 179 VDEMLYEIQISKFSAIEEMLERVSSENPIDPEKSKQWMTATIELIDPKTVVKVKPMSYSP 238
Query: 585 KGREEITKQISELLELK 635
REE +QI ELLELK
Sbjct: 239 SDREEFDRQIKELLELK 255
Score = 35.8 bits (81), Expect(2) = 4e-18
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 634 KLISPSKFPHMSPAFLVENE 693
K+I PSK HMSPAFLVENE
Sbjct: 255 KVIKPSKSTHMSPAFLVENE 274
>emb|CAH68829.1| polyprotein [Carnation etched ring virus]
Length = 656
Score = 80.1 bits (196), Expect(2) = 7e-18
Identities = 39/79 (49%), Positives = 54/79 (68%)
Frame = +3
Query: 399 TRVVQKVFDLNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVRVKPTIY 578
+ + + +++ + FS IE++++ V SENPIDP KSKQ + A+I L+ PK IV VKP Y
Sbjct: 176 SNIEELCYEIQISKFSAIEEMLERVSSENPIDPEKSKQWMTATIELIDPKTIVEVKPMSY 235
Query: 579 SPKGREEITKQISELLELK 635
SP REE KQI E L+LK
Sbjct: 236 SPSDREEFDKQIKEPLDLK 254
Score = 38.9 bits (89), Expect(2) = 7e-18
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1
Query: 634 KLISPSKFPHMSPAFLVENE 693
K+I PSK PHMSPAFLVENE
Sbjct: 254 KVIKPSKSPHMSPAFLVENE 273
>ref|YP_006607892.1| reverse transcriptase [Soybean Putnam virus]
gb|AFP95350.1| reverse transcriptase [Soybean Putnam virus]
Length = 699
Score = 80.9 bits (198), Expect(2) = 2e-17
Identities = 42/77 (54%), Positives = 52/77 (67%)
Frame = +3
Query: 405 VVQKVFDLNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVRVKPTIYSP 584
V QK+F + S I L+D VCSENPIDP KSK+ + ASI+L P IV+VKP Y+P
Sbjct: 222 VTQKLFSIQQDHLSKIHNLLDRVCSENPIDPEKSKRWMTASIKLKDPNTIVKVKPMQYNP 281
Query: 585 KGREEITKQISELLELK 635
R E +KQI ELL+LK
Sbjct: 282 DDRMEFSKQIKELLDLK 298
Score = 36.6 bits (83), Expect(2) = 2e-17
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 634 KLISPSKFPHMSPAFLVENE 693
K+I PSK PH SPAFLVENE
Sbjct: 298 KIIIPSKSPHQSPAFLVENE 317
>dbj|BAO53393.1| reverse transcriptase [Cauliflower mosaic virus]
dbj|BAO53400.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 678
Score = 81.3 bits (199), Expect(2) = 3e-17
Identities = 41/78 (52%), Positives = 57/78 (73%)
Frame = +3
Query: 402 RVVQKVFDLNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVRVKPTIYS 581
R+ +K+F + Q IE+L+++VCSENP+DP K+KQ ++ASI+L P K ++VKP YS
Sbjct: 196 RLEEKLF-ITQQRMQKIEELLEKVCSENPLDPNKTKQWMKASIKLSDPSKAIKVKPMKYS 254
Query: 582 PKGREEITKQISELLELK 635
P REE KQI ELL+LK
Sbjct: 255 PMDREEFDKQIKELLDLK 272
Score = 35.8 bits (81), Expect(2) = 3e-17
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +1
Query: 634 KLISPSKFPHMSPAFLVENE 693
K+I PSK PHM+PAFLV NE
Sbjct: 272 KVIKPSKSPHMAPAFLVNNE 291
>dbj|BAO53386.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 678
Score = 81.3 bits (199), Expect(2) = 3e-17
Identities = 41/78 (52%), Positives = 57/78 (73%)
Frame = +3
Query: 402 RVVQKVFDLNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVRVKPTIYS 581
R+ +K+F + Q IE+L+++VCSENP+DP K+KQ ++ASI+L P K ++VKP YS
Sbjct: 196 RLEEKLF-ITQQRMQKIEELLEKVCSENPLDPNKTKQWMKASIKLSDPSKAIKVKPMKYS 254
Query: 582 PKGREEITKQISELLELK 635
P REE KQI ELL+LK
Sbjct: 255 PMDREEFDKQIKELLDLK 272
Score = 35.8 bits (81), Expect(2) = 3e-17
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +1
Query: 634 KLISPSKFPHMSPAFLVENE 693
K+I PSK PHM+PAFLV NE
Sbjct: 272 KVIKPSKSPHMAPAFLVNNE 291
>ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus]
gb|AAM53128.1| ORFV [Mirabilis mosaic virus]
Length = 674
Score = 84.0 bits (206), Expect(2) = 3e-17
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 6/88 (6%)
Frame = +3
Query: 399 TRVVQKVFD------LNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVR 560
T + Q+V D + + F IEQL+++VCSENPIDP KSK ++A I+L+ P+ +VR
Sbjct: 182 TNITQEVIDDEEKGFIEISKFREIEQLLEKVCSENPIDPEKSKGWMKAEIKLIKPETVVR 241
Query: 561 VKPTIYSPKGREEITKQISELLELKAYL 644
VKP +YSP+ R+E QI ELL+LK +
Sbjct: 242 VKPMVYSPEDRKEFEIQIKELLDLKVII 269
Score = 32.7 bits (73), Expect(2) = 3e-17
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +1
Query: 634 KLISPSKFPHMSPAFLVENE 693
K+I PSK HMSPAFLVE E
Sbjct: 266 KVIIPSKSQHMSPAFLVEKE 285
>gb|AFI61742.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 80.5 bits (197), Expect(2) = 4e-17
Identities = 39/78 (50%), Positives = 55/78 (70%)
Frame = +3
Query: 402 RVVQKVFDLNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVRVKPTIYS 581
R+ ++ + Q IE+L+++VCSENP+DP K+KQ ++ASI+L P K ++VKP YS
Sbjct: 196 RLAEEKLFITQQRMQKIEELLEKVCSENPLDPNKTKQWMKASIKLSDPSKAIKVKPMKYS 255
Query: 582 PKGREEITKQISELLELK 635
P REE KQI ELL+LK
Sbjct: 256 PMDREEFDKQIKELLDLK 273
Score = 35.8 bits (81), Expect(2) = 4e-17
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +1
Query: 634 KLISPSKFPHMSPAFLVENE 693
K+I PSK PHM+PAFLV NE
Sbjct: 273 KVIKPSKSPHMAPAFLVNNE 292
>gb|ATS17305.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 675
Score = 80.1 bits (196), Expect(2) = 6e-17
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +3
Query: 411 QKVFDLNLQTFSIIEQLIDEVCSENPIDPIKSKQ*IRASIRLLAPKKIVRVKPTIYSPKG 590
+K+F + Q IE+L+++VCSENP+DP K+KQ ++ASI+L P K ++VKP YSP
Sbjct: 196 EKLF-ITQQRMQKIEELLEKVCSENPLDPSKTKQWMKASIKLSDPSKAIKVKPMKYSPMD 254
Query: 591 REEITKQISELLELK 635
REE KQI ELL+LK
Sbjct: 255 REEFDKQIKELLDLK 269
Score = 35.8 bits (81), Expect(2) = 6e-17
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +1
Query: 634 KLISPSKFPHMSPAFLVENE 693
K+I PSK PHM+PAFLV NE
Sbjct: 269 KVIKPSKSPHMAPAFLVNNE 288