BLASTX nr result

ID: Rehmannia30_contig00024531 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00024531
         (678 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011001849.1| PREDICTED: polypyrimidine tract-binding prot...    69   7e-10
gb|PNY06318.1| polypyrimidine tract-binding protein 2-like [Trif...    65   1e-09
ref|XP_021643317.1| polypyrimidine tract-binding protein homolog...    65   1e-09
gb|KHG23587.1| hypothetical protein F383_28973 [Gossypium arboreum]    57   9e-09
ref|XP_012858600.1| PREDICTED: polypyrimidine tract-binding prot...    64   2e-08
ref|XP_009376254.1| PREDICTED: polypyrimidine tract-binding prot...    60   5e-08
gb|ESQ43185.1| hypothetical protein EUTSA_v10016110mg [Eutrema s...    60   7e-08
ref|XP_021643315.1| polypyrimidine tract-binding protein homolog...    60   7e-08
ref|XP_006360176.1| PREDICTED: polypyrimidine tract-binding prot...    62   9e-08
ref|XP_009614816.1| PREDICTED: polypyrimidine tract-binding prot...    62   2e-07
ref|XP_009589653.2| PREDICTED: polypyrimidine tract-binding prot...    62   2e-07
ref|XP_019225105.1| PREDICTED: polypyrimidine tract-binding prot...    62   2e-07
ref|XP_011076027.1| polypyrimidine tract-binding protein homolog...    61   2e-07
ref|XP_016513298.1| PREDICTED: polypyrimidine tract-binding prot...    61   2e-07
ref|XP_016735633.1| PREDICTED: polypyrimidine tract-binding prot...    57   2e-07
ref|XP_012474519.1| PREDICTED: polypyrimidine tract-binding prot...    57   2e-07
ref|XP_020551120.1| polypyrimidine tract-binding protein homolog...    61   3e-07
ref|XP_019267071.1| PREDICTED: polypyrimidine tract-binding prot...    60   6e-07
ref|XP_009788551.1| PREDICTED: polypyrimidine tract-binding prot...    60   6e-07
ref|XP_011001848.1| PREDICTED: polypyrimidine tract-binding prot...    60   8e-07

>ref|XP_011001849.1| PREDICTED: polypyrimidine tract-binding protein homolog 2 isoform
           X3 [Populus euphratica]
          Length = 361

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 34/55 (61%), Positives = 40/55 (72%)
 Frame = +1

Query: 4   MLLEMYFW*QLKGMMHVLSVLMSYTWHMSRKYLQWQLIASGERAHVCLSSFSLLN 168
           ML+EMY W  LKG MH LS LM  TW MSR+YL+WQL A GERAHV  S+F  ++
Sbjct: 1   MLVEMYCWLPLKGQMHALSALMFCTWPMSREYLRWQLSALGERAHV-FSAFGFVH 54


>gb|PNY06318.1| polypyrimidine tract-binding protein 2-like [Trifolium pratense]
          Length = 143

 Score = 64.7 bits (156), Expect = 1e-09
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = +3

Query: 3   DVAGNVLLVTIEGNDARLVSIDVLHLAHVKEIPSMAA 113
           DVAGNVLLVTIEG DARLVSIDVLHLAH+K I SMAA
Sbjct: 107 DVAGNVLLVTIEGADARLVSIDVLHLAHIKAISSMAA 143


>ref|XP_021643317.1| polypyrimidine tract-binding protein homolog 2-like isoform X3
           [Hevea brasiliensis]
          Length = 143

 Score = 64.7 bits (156), Expect = 1e-09
 Identities = 34/37 (91%), Positives = 34/37 (91%)
 Frame = +3

Query: 3   DVAGNVLLVTIEGNDARLVSIDVLHLAHVKEIPSMAA 113
           DVAGNVLLVTIEG DARLVSIDVLHLAHVK I SMAA
Sbjct: 107 DVAGNVLLVTIEGADARLVSIDVLHLAHVKGISSMAA 143


>gb|KHG23587.1| hypothetical protein F383_28973 [Gossypium arboreum]
          Length = 179

 Score = 57.4 bits (137), Expect(2) = 9e-09
 Identities = 30/34 (88%), Positives = 30/34 (88%)
 Frame = +3

Query: 3   DVAGNVLLVTIEGNDARLVSIDVLHLAHVKEIPS 104
           DVAGNVLLVTIEG DARLVSIDVLHL HVK I S
Sbjct: 107 DVAGNVLLVTIEGQDARLVSIDVLHLDHVKGIIS 140



 Score = 30.8 bits (68), Expect(2) = 9e-09
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 89  QGNTFNGSLLHREKERMCV 145
           +G   NGSL+HREKE MCV
Sbjct: 136 KGIISNGSLVHREKENMCV 154


>ref|XP_012858600.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
           isoform X3 [Erythranthe guttata]
          Length = 348

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/42 (73%), Positives = 35/42 (83%)
 Frame = +1

Query: 43  MMHVLSVLMSYTWHMSRKYLQWQLIASGERAHVCLSSFSLLN 168
           MM VLSVLMS+TWHMSRKYLQWQLI SGER HV  S+F  ++
Sbjct: 1   MMLVLSVLMSFTWHMSRKYLQWQLITSGERTHV-FSAFGFVH 41


>ref|XP_009376254.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
           isoform X2 [Pyrus x bretschneideri]
          Length = 143

 Score = 60.5 bits (145), Expect = 5e-08
 Identities = 31/37 (83%), Positives = 32/37 (86%)
 Frame = +3

Query: 3   DVAGNVLLVTIEGNDARLVSIDVLHLAHVKEIPSMAA 113
           DVAGNVLLVTIEG DARLVSID+LHLAH K   SMAA
Sbjct: 107 DVAGNVLLVTIEGADARLVSIDILHLAHFKRKSSMAA 143


>gb|ESQ43185.1| hypothetical protein EUTSA_v10016110mg [Eutrema salsugineum]
          Length = 143

 Score = 60.1 bits (144), Expect = 7e-08
 Identities = 29/37 (78%), Positives = 32/37 (86%)
 Frame = +3

Query: 3   DVAGNVLLVTIEGNDARLVSIDVLHLAHVKEIPSMAA 113
           DV GNVLLVT+EG DAR+VSIDVLHL HVK I S+AA
Sbjct: 107 DVVGNVLLVTVEGEDARMVSIDVLHLGHVKAISSVAA 143


>ref|XP_021643315.1| polypyrimidine tract-binding protein homolog 2-like isoform X1
           [Hevea brasiliensis]
          Length = 144

 Score = 60.1 bits (144), Expect = 7e-08
 Identities = 34/38 (89%), Positives = 34/38 (89%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3   DVAGNVLLVTIEGNDARLVSIDVLHL-AHVKEIPSMAA 113
           DVAGNVLLVTIEG DARLVSIDVLHL AHVK I SMAA
Sbjct: 107 DVAGNVLLVTIEGADARLVSIDVLHLQAHVKGISSMAA 144


>ref|XP_006360176.1| PREDICTED: polypyrimidine tract-binding protein homolog 2 isoform
           X3 [Solanum tuberosum]
          Length = 354

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 31/42 (73%), Positives = 34/42 (80%)
 Frame = +1

Query: 43  MMHVLSVLMSYTWHMSRKYLQWQLIASGERAHVCLSSFSLLN 168
           M H LSVLMSYTW MSR YLQWQLIASGERAHV  S+F  ++
Sbjct: 1   MTHALSVLMSYTWPMSRIYLQWQLIASGERAHV-FSAFGFVH 41


>ref|XP_009614816.1| PREDICTED: polypyrimidine tract-binding protein homolog 2 isoform
           X3 [Nicotiana tomentosiformis]
 ref|XP_016482169.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
           isoform X3 [Nicotiana tabacum]
          Length = 344

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 31/42 (73%), Positives = 34/42 (80%)
 Frame = +1

Query: 43  MMHVLSVLMSYTWHMSRKYLQWQLIASGERAHVCLSSFSLLN 168
           M HVLSVLM YTW MSR YLQWQLIASGERAHV  S+F  ++
Sbjct: 1   MTHVLSVLMFYTWPMSRIYLQWQLIASGERAHV-FSAFGFVH 41


>ref|XP_009589653.2| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
           isoform X4 [Nicotiana tomentosiformis]
          Length = 351

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 32/51 (62%), Positives = 38/51 (74%)
 Frame = +1

Query: 16  MYFW*QLKGMMHVLSVLMSYTWHMSRKYLQWQLIASGERAHVCLSSFSLLN 168
           M  W QL+GMM  LSVLM Y W +SR YLQWQLIASGERA+V  S+F  ++
Sbjct: 1   MCCWLQLRGMMPALSVLMFYIWPVSRIYLQWQLIASGERANV-FSAFGFVH 50


>ref|XP_019225105.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
           isoform X3 [Nicotiana attenuata]
          Length = 352

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 32/51 (62%), Positives = 38/51 (74%)
 Frame = +1

Query: 16  MYFW*QLKGMMHVLSVLMSYTWHMSRKYLQWQLIASGERAHVCLSSFSLLN 168
           M  W QL+GMM  LSVLM Y W +SR YLQWQLIASGERA+V  S+F  ++
Sbjct: 1   MCCWLQLRGMMPALSVLMFYIWPVSRIYLQWQLIASGERANV-FSAFGFVH 50


>ref|XP_011076027.1| polypyrimidine tract-binding protein homolog 2 isoform X3 [Sesamum
           indicum]
          Length = 342

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 30/42 (71%), Positives = 33/42 (78%)
 Frame = +1

Query: 43  MMHVLSVLMSYTWHMSRKYLQWQLIASGERAHVCLSSFSLLN 168
           M   LS LMSYTWHMSR YLQWQLIASGERAHV  S+F  ++
Sbjct: 1   MTLALSALMSYTWHMSRMYLQWQLIASGERAHV-FSAFGFVH 41


>ref|XP_016513298.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
           isoform X4 [Nicotiana tabacum]
          Length = 352

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 32/51 (62%), Positives = 38/51 (74%)
 Frame = +1

Query: 16  MYFW*QLKGMMHVLSVLMSYTWHMSRKYLQWQLIASGERAHVCLSSFSLLN 168
           M  W QL+GMM  LSVLM Y W +SR YLQWQLIASGERA+V  S+F  ++
Sbjct: 1   MCCWLQLRGMMLALSVLMFYIWPVSRIYLQWQLIASGERANV-FSAFGFVH 50


>ref|XP_016735633.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
           isoform X3 [Gossypium hirsutum]
          Length = 447

 Score = 57.4 bits (137), Expect(2) = 2e-07
 Identities = 30/34 (88%), Positives = 30/34 (88%)
 Frame = +3

Query: 3   DVAGNVLLVTIEGNDARLVSIDVLHLAHVKEIPS 104
           DVAGNVLLVTIEG DARLVSIDVLHL HVK I S
Sbjct: 107 DVAGNVLLVTIEGQDARLVSIDVLHLDHVKGIIS 140



 Score = 25.8 bits (55), Expect(2) = 2e-07
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +2

Query: 89  QGNTFNGSLLHREKERM 139
           +G   NGSL+HREKE M
Sbjct: 136 KGIISNGSLVHREKENM 152


>ref|XP_012474519.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
           isoform X3 [Gossypium raimondii]
          Length = 447

 Score = 57.4 bits (137), Expect(2) = 2e-07
 Identities = 30/34 (88%), Positives = 30/34 (88%)
 Frame = +3

Query: 3   DVAGNVLLVTIEGNDARLVSIDVLHLAHVKEIPS 104
           DVAGNVLLVTIEG DARLVSIDVLHL HVK I S
Sbjct: 107 DVAGNVLLVTIEGQDARLVSIDVLHLDHVKGIIS 140



 Score = 25.8 bits (55), Expect(2) = 2e-07
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +2

Query: 89  QGNTFNGSLLHREKERM 139
           +G   NGSL+HREKE M
Sbjct: 136 KGIISNGSLVHREKENM 152


>ref|XP_020551120.1| polypyrimidine tract-binding protein homolog 2 isoform X3 [Sesamum
           indicum]
 ref|XP_020551121.1| polypyrimidine tract-binding protein homolog 2 isoform X3 [Sesamum
           indicum]
          Length = 342

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 29/42 (69%), Positives = 33/42 (78%)
 Frame = +1

Query: 43  MMHVLSVLMSYTWHMSRKYLQWQLIASGERAHVCLSSFSLLN 168
           MM VLS LMSYTWHMSRKYL WQL A GER+HV  S+F  ++
Sbjct: 1   MMRVLSALMSYTWHMSRKYLHWQLSAFGERSHV-FSAFGFVH 41


>ref|XP_019267071.1| PREDICTED: polypyrimidine tract-binding protein homolog 2 isoform
           X3 [Nicotiana attenuata]
          Length = 344

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 30/42 (71%), Positives = 33/42 (78%)
 Frame = +1

Query: 43  MMHVLSVLMSYTWHMSRKYLQWQLIASGERAHVCLSSFSLLN 168
           M H LSVLM YTW MSR YLQWQLIASGERAHV  S+F  ++
Sbjct: 1   MTHALSVLMFYTWPMSRIYLQWQLIASGERAHV-FSAFGFVH 41


>ref|XP_009788551.1| PREDICTED: polypyrimidine tract-binding protein homolog 2 isoform
           X3 [Nicotiana sylvestris]
 ref|XP_016459866.1| PREDICTED: polypyrimidine tract-binding protein homolog 2 isoform
           X3 [Nicotiana tabacum]
          Length = 344

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 30/42 (71%), Positives = 33/42 (78%)
 Frame = +1

Query: 43  MMHVLSVLMSYTWHMSRKYLQWQLIASGERAHVCLSSFSLLN 168
           M H LSVLM YTW MSR YLQWQLIASGERAHV  S+F  ++
Sbjct: 1   MTHALSVLMFYTWPMSRIYLQWQLIASGERAHV-FSAFGFVH 41


>ref|XP_011001848.1| PREDICTED: polypyrimidine tract-binding protein homolog 2 isoform
           X2 [Populus euphratica]
          Length = 362

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 33/56 (58%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
 Frame = +1

Query: 4   MLLEMYFW*QLKGMMHVLSVLMSYTWH-MSRKYLQWQLIASGERAHVCLSSFSLLN 168
           ML+EMY W  LKG MH LS LM  T   MSR+YL+WQL A GERAHV  S+F  ++
Sbjct: 1   MLVEMYCWLPLKGQMHALSALMFCTCRPMSREYLRWQLSALGERAHV-FSAFGFVH 55


Top