BLASTX nr result

ID: Rehmannia30_contig00024418 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00024418
         (588 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN26761.1| putative cytochrome C oxidase assembly protein [H...    63   3e-08
ref|XP_011090559.1| protein SCO1 homolog 2, mitochondrial [Sesam...    57   3e-06

>gb|PIN26761.1| putative cytochrome C oxidase assembly protein [Handroanthus
           impetiginosus]
          Length = 313

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 38/98 (38%), Positives = 48/98 (48%)
 Frame = -2

Query: 299 MPLLTRIVFTSPKNHSEAFFQIYXXXXXXXXXXXSIYTRSGPSNASLHPLTEQTIMGNPE 120
           MPL +RIVF+S KNH++A  QI+            I+TRS P+N  L P+T QT MG+PE
Sbjct: 1   MPLYSRIVFSSLKNHTDAS-QIHRWFGASRRFSSLIFTRSAPTNILLPPVTGQTTMGDPE 59

Query: 119 GLNYFXXXXXXXXXXXXXXXXXXXXXXSLPLHEQTVTP 6
           GLN F                        PL E+  TP
Sbjct: 60  GLNCFKKFGFSKRYYSSSTRSTNNTKPPFPLPEEAATP 97


>ref|XP_011090559.1| protein SCO1 homolog 2, mitochondrial [Sesamum indicum]
 ref|XP_011090560.1| protein SCO1 homolog 2, mitochondrial [Sesamum indicum]
          Length = 313

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 41/98 (41%), Positives = 49/98 (50%)
 Frame = -2

Query: 299 MPLLTRIVFTSPKNHSEAFFQIYXXXXXXXXXXXSIYTRSGPSNASLHPLTEQTIMGNPE 120
           MPLL+ IV +S K+ SEA  +I            SI+TR G SN S +PLTE TI+G+PE
Sbjct: 1   MPLLSTIVCSSLKS-SEASPRILRRFVASKRFSSSIFTRCGQSNVSRYPLTEPTIVGDPE 59

Query: 119 GLNYFXXXXXXXXXXXXXXXXXXXXXXSLPLHEQTVTP 6
           GLN F                      SLPL EQ V P
Sbjct: 60  GLNCFKRFGSSKRYYSSSTRSTSSNKPSLPLPEQAVAP 97


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