BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00024412
         (1321 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN17604.1| 23S rRNA pseudouridine(955/2504/2580) synthase [H...   365   e-119
ref|XP_020552922.1| RNA pseudouridine synthase 4, mitochondrial ...   347   e-114
ref|XP_012831077.1| PREDICTED: RNA pseudouridine synthase 4, mit...   347   e-113
ref|XP_012831076.1| PREDICTED: RNA pseudouridine synthase 4, mit...   347   e-113
ref|XP_020552921.1| RNA pseudouridine synthase 4, mitochondrial ...   347   e-113
ref|XP_011092538.1| RNA pseudouridine synthase 4, mitochondrial ...   347   e-112
gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Erythra...   347   e-112
ref|XP_012831075.1| PREDICTED: RNA pseudouridine synthase 4, mit...   347   e-112
ref|XP_010647894.1| PREDICTED: RNA pseudouridine synthase 4, mit...   327   e-105
ref|XP_002282614.1| PREDICTED: RNA pseudouridine synthase 4, mit...   327   e-104
ref|XP_022896844.1| RNA pseudouridine synthase 4, mitochondrial ...   320   e-101
ref|XP_017230138.1| PREDICTED: RNA pseudouridine synthase 4, mit...   318   e-101
ref|XP_016460522.1| PREDICTED: RNA pseudouridine synthase 4, mit...   308   1e-98
ref|XP_018827854.1| PREDICTED: RNA pseudouridine synthase 4, mit...   308   3e-98
ref|XP_019225818.1| PREDICTED: RNA pseudouridine synthase 4, mit...   310   7e-98
gb|KZV33213.1| RNA pseudouridine synthase 4, mitochondrial-like ...   310   8e-98
gb|PHT62613.1| RNA pseudouridine synthase 4, mitochondrial [Caps...   307   1e-97
ref|XP_009629273.1| PREDICTED: RNA pseudouridine synthase 4, mit...   305   3e-97
ref|XP_018827853.1| PREDICTED: RNA pseudouridine synthase 4, mit...   308   4e-97
ref|XP_019166408.1| PREDICTED: RNA pseudouridine synthase 4, mit...   308   5e-97

>gb|PIN17604.1| 23S rRNA pseudouridine(955/2504/2580) synthase [Handroanthus
           impetiginosus]
          Length = 462

 Score =  365 bits (938), Expect = e-119
 Identities = 189/242 (78%), Positives = 206/242 (85%), Gaps = 4/242 (1%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQVSGSDRIVQKKYYALVIGSPRR 182
           LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDV    GS RI+QK+Y+ALVIGSPRR
Sbjct: 224 LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDV---PGSKRILQKRYWALVIGSPRR 280

Query: 183 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 362
            +GLI+ PL+KVVVDNGKSERITVVDNNHT+S QH+ TEYRVI+SS  GYT LELSPLTG
Sbjct: 281 HQGLITAPLVKVVVDNGKSERITVVDNNHTVSAQHAVTEYRVIASSSCGYTLLELSPLTG 340

Query: 363 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELE 542
           RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLG   +S SDL+ D+KM K KH  IGL+LE
Sbjct: 341 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGHQMDSTSDLRPDNKMFKVKHETIGLDLE 400

Query: 543 NGSISDKQPFLHLHCKEMILPNISLALQRGRIISN----QMESIRLDAPLPAHMQRSWDL 710
           NGSISDK   LHLHCK MILPNIS+ALQ    IS+    +MESI+LDAPL  HMQRS DL
Sbjct: 401 NGSISDKHFSLHLHCKRMILPNISMALQHSNRISDLDAVRMESIKLDAPLAPHMQRSLDL 460

Query: 711 LN 716
           LN
Sbjct: 461 LN 462


>ref|XP_020552922.1| RNA pseudouridine synthase 4, mitochondrial isoform X3 [Sesamum
           indicum]
          Length = 328

 Score =  347 bits (891), Expect = e-114
 Identities = 180/242 (74%), Positives = 202/242 (83%), Gaps = 4/242 (1%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQVSGSDRIVQKKYYALVIGSPRR 182
           LDRDSSGILVMGRTQL+ TILHSIFREKTFGAS+DV     S +I+QK+Y+ALVIGSPRR
Sbjct: 90  LDRDSSGILVMGRTQLTATILHSIFREKTFGASDDV---PDSKKILQKRYWALVIGSPRR 146

Query: 183 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 362
           REGLISVPL KVV+DNGKSERITVVD   T+S QH+ TEYRVI+SSP GYTWLEL PLTG
Sbjct: 147 REGLISVPLGKVVIDNGKSERITVVDTTKTVSAQHAVTEYRVIASSPCGYTWLELLPLTG 206

Query: 363 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELE 542
           RKHQLRVHCAEVLGTPIVGDYKYGWQAHK+LG     ASDL+  +K+++ +H+ +G + E
Sbjct: 207 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKRLGSRLVYASDLRWHNKISEVQHDTVGFDSE 266

Query: 543 NGSISDKQPFLHLHCKEMILPNISLALQRGRIISN----QMESIRLDAPLPAHMQRSWDL 710
            GSISDKQ  LHLHCKEMILPNISLALQ    IS+      ESI+L APLPAHMQRSWDL
Sbjct: 267 IGSISDKQLRLHLHCKEMILPNISLALQHRNGISDLDTAATESIKLVAPLPAHMQRSWDL 326

Query: 711 LN 716
           LN
Sbjct: 327 LN 328


>ref|XP_012831077.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X3
           [Erythranthe guttata]
          Length = 364

 Score =  347 bits (890), Expect = e-113
 Identities = 178/242 (73%), Positives = 207/242 (85%), Gaps = 4/242 (1%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQVSGSDRIVQKKYYALVIGSPRR 182
           LDRDSSGILVMGRTQLSTTILHS+FREKTFGASN+V    G+ +I+QKKY+ALVIGSPRR
Sbjct: 126 LDRDSSGILVMGRTQLSTTILHSVFREKTFGASNNVC---GNKKILQKKYWALVIGSPRR 182

Query: 183 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 362
           REGLISVPL+KVV+DNGKSERITV +NN+TLS QH+ TEYRVI+SS  GY+WLELSPLTG
Sbjct: 183 REGLISVPLVKVVLDNGKSERITVAENNNTLSAQHAVTEYRVIASSSRGYSWLELSPLTG 242

Query: 363 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELE 542
           RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLG + +S SD K  D+++K K++   LELE
Sbjct: 243 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGHHLDSVSDPKWGDEISKVKNDTFALELE 302

Query: 543 NGSISDKQPFLHLHCKEMILPNISLALQRGRIISN----QMESIRLDAPLPAHMQRSWDL 710
           +GSISDKQ  LHLHCKEM LP+I+ AL+   I S+    +M+SI L+A LPAHMQRSW L
Sbjct: 303 SGSISDKQFRLHLHCKEMSLPDITQALKYASINSDLDTAEMKSITLEACLPAHMQRSWSL 362

Query: 711 LN 716
           L+
Sbjct: 363 LS 364


>ref|XP_012831076.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
           [Erythranthe guttata]
          Length = 372

 Score =  347 bits (890), Expect = e-113
 Identities = 178/242 (73%), Positives = 207/242 (85%), Gaps = 4/242 (1%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQVSGSDRIVQKKYYALVIGSPRR 182
           LDRDSSGILVMGRTQLSTTILHS+FREKTFGASN+V    G+ +I+QKKY+ALVIGSPRR
Sbjct: 134 LDRDSSGILVMGRTQLSTTILHSVFREKTFGASNNVC---GNKKILQKKYWALVIGSPRR 190

Query: 183 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 362
           REGLISVPL+KVV+DNGKSERITV +NN+TLS QH+ TEYRVI+SS  GY+WLELSPLTG
Sbjct: 191 REGLISVPLVKVVLDNGKSERITVAENNNTLSAQHAVTEYRVIASSSRGYSWLELSPLTG 250

Query: 363 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELE 542
           RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLG + +S SD K  D+++K K++   LELE
Sbjct: 251 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGHHLDSVSDPKWGDEISKVKNDTFALELE 310

Query: 543 NGSISDKQPFLHLHCKEMILPNISLALQRGRIISN----QMESIRLDAPLPAHMQRSWDL 710
           +GSISDKQ  LHLHCKEM LP+I+ AL+   I S+    +M+SI L+A LPAHMQRSW L
Sbjct: 311 SGSISDKQFRLHLHCKEMSLPDITQALKYASINSDLDTAEMKSITLEACLPAHMQRSWSL 370

Query: 711 LN 716
           L+
Sbjct: 371 LS 372


>ref|XP_020552921.1| RNA pseudouridine synthase 4, mitochondrial isoform X2 [Sesamum
           indicum]
          Length = 431

 Score =  347 bits (891), Expect = e-113
 Identities = 180/242 (74%), Positives = 202/242 (83%), Gaps = 4/242 (1%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQVSGSDRIVQKKYYALVIGSPRR 182
           LDRDSSGILVMGRTQL+ TILHSIFREKTFGAS+DV     S +I+QK+Y+ALVIGSPRR
Sbjct: 193 LDRDSSGILVMGRTQLTATILHSIFREKTFGASDDV---PDSKKILQKRYWALVIGSPRR 249

Query: 183 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 362
           REGLISVPL KVV+DNGKSERITVVD   T+S QH+ TEYRVI+SSP GYTWLEL PLTG
Sbjct: 250 REGLISVPLGKVVIDNGKSERITVVDTTKTVSAQHAVTEYRVIASSPCGYTWLELLPLTG 309

Query: 363 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELE 542
           RKHQLRVHCAEVLGTPIVGDYKYGWQAHK+LG     ASDL+  +K+++ +H+ +G + E
Sbjct: 310 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKRLGSRLVYASDLRWHNKISEVQHDTVGFDSE 369

Query: 543 NGSISDKQPFLHLHCKEMILPNISLALQRGRIISN----QMESIRLDAPLPAHMQRSWDL 710
            GSISDKQ  LHLHCKEMILPNISLALQ    IS+      ESI+L APLPAHMQRSWDL
Sbjct: 370 IGSISDKQLRLHLHCKEMILPNISLALQHRNGISDLDTAATESIKLVAPLPAHMQRSWDL 429

Query: 711 LN 716
           LN
Sbjct: 430 LN 431


>ref|XP_011092538.1| RNA pseudouridine synthase 4, mitochondrial isoform X1 [Sesamum
           indicum]
          Length = 454

 Score =  347 bits (891), Expect = e-112
 Identities = 180/242 (74%), Positives = 202/242 (83%), Gaps = 4/242 (1%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQVSGSDRIVQKKYYALVIGSPRR 182
           LDRDSSGILVMGRTQL+ TILHSIFREKTFGAS+DV     S +I+QK+Y+ALVIGSPRR
Sbjct: 216 LDRDSSGILVMGRTQLTATILHSIFREKTFGASDDV---PDSKKILQKRYWALVIGSPRR 272

Query: 183 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 362
           REGLISVPL KVV+DNGKSERITVVD   T+S QH+ TEYRVI+SSP GYTWLEL PLTG
Sbjct: 273 REGLISVPLGKVVIDNGKSERITVVDTTKTVSAQHAVTEYRVIASSPCGYTWLELLPLTG 332

Query: 363 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELE 542
           RKHQLRVHCAEVLGTPIVGDYKYGWQAHK+LG     ASDL+  +K+++ +H+ +G + E
Sbjct: 333 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKRLGSRLVYASDLRWHNKISEVQHDTVGFDSE 392

Query: 543 NGSISDKQPFLHLHCKEMILPNISLALQRGRIISN----QMESIRLDAPLPAHMQRSWDL 710
            GSISDKQ  LHLHCKEMILPNISLALQ    IS+      ESI+L APLPAHMQRSWDL
Sbjct: 393 IGSISDKQLRLHLHCKEMILPNISLALQHRNGISDLDTAATESIKLVAPLPAHMQRSWDL 452

Query: 711 LN 716
           LN
Sbjct: 453 LN 454


>gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Erythranthe guttata]
          Length = 457

 Score =  347 bits (890), Expect = e-112
 Identities = 178/242 (73%), Positives = 207/242 (85%), Gaps = 4/242 (1%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQVSGSDRIVQKKYYALVIGSPRR 182
           LDRDSSGILVMGRTQLSTTILHS+FREKTFGASN+V    G+ +I+QKKY+ALVIGSPRR
Sbjct: 219 LDRDSSGILVMGRTQLSTTILHSVFREKTFGASNNVC---GNKKILQKKYWALVIGSPRR 275

Query: 183 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 362
           REGLISVPL+KVV+DNGKSERITV +NN+TLS QH+ TEYRVI+SS  GY+WLELSPLTG
Sbjct: 276 REGLISVPLVKVVLDNGKSERITVAENNNTLSAQHAVTEYRVIASSSRGYSWLELSPLTG 335

Query: 363 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELE 542
           RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLG + +S SD K  D+++K K++   LELE
Sbjct: 336 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGHHLDSVSDPKWGDEISKVKNDTFALELE 395

Query: 543 NGSISDKQPFLHLHCKEMILPNISLALQRGRIISN----QMESIRLDAPLPAHMQRSWDL 710
           +GSISDKQ  LHLHCKEM LP+I+ AL+   I S+    +M+SI L+A LPAHMQRSW L
Sbjct: 396 SGSISDKQFRLHLHCKEMSLPDITQALKYASINSDLDTAEMKSITLEACLPAHMQRSWSL 455

Query: 711 LN 716
           L+
Sbjct: 456 LS 457


>ref|XP_012831075.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
           [Erythranthe guttata]
          Length = 461

 Score =  347 bits (890), Expect = e-112
 Identities = 178/242 (73%), Positives = 207/242 (85%), Gaps = 4/242 (1%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQVSGSDRIVQKKYYALVIGSPRR 182
           LDRDSSGILVMGRTQLSTTILHS+FREKTFGASN+V    G+ +I+QKKY+ALVIGSPRR
Sbjct: 223 LDRDSSGILVMGRTQLSTTILHSVFREKTFGASNNVC---GNKKILQKKYWALVIGSPRR 279

Query: 183 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 362
           REGLISVPL+KVV+DNGKSERITV +NN+TLS QH+ TEYRVI+SS  GY+WLELSPLTG
Sbjct: 280 REGLISVPLVKVVLDNGKSERITVAENNNTLSAQHAVTEYRVIASSSRGYSWLELSPLTG 339

Query: 363 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELE 542
           RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLG + +S SD K  D+++K K++   LELE
Sbjct: 340 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGHHLDSVSDPKWGDEISKVKNDTFALELE 399

Query: 543 NGSISDKQPFLHLHCKEMILPNISLALQRGRIISN----QMESIRLDAPLPAHMQRSWDL 710
           +GSISDKQ  LHLHCKEM LP+I+ AL+   I S+    +M+SI L+A LPAHMQRSW L
Sbjct: 400 SGSISDKQFRLHLHCKEMSLPDITQALKYASINSDLDTAEMKSITLEACLPAHMQRSWSL 459

Query: 711 LN 716
           L+
Sbjct: 460 LS 461


>ref|XP_010647894.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
           [Vitis vinifera]
          Length = 430

 Score =  327 bits (838), Expect = e-105
 Identities = 164/242 (67%), Positives = 195/242 (80%), Gaps = 4/242 (1%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQVSGSDRIVQKKYYALVIGSPRR 182
           LDRDSSGIL+MGRTQ S TILHSIFREKTFGASN+   +    RI+Q++Y+ALVIGSPRR
Sbjct: 190 LDRDSSGILIMGRTQTSATILHSIFREKTFGASNN--DIDTKKRILQRRYWALVIGSPRR 247

Query: 183 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 362
             GLIS PL KVVVD+GKSERIT+VDN  T+S QH+ TEYRVI SS  GYTWLELSPLTG
Sbjct: 248 PRGLISAPLGKVVVDDGKSERITIVDNVQTMSSQHAITEYRVIKSSCHGYTWLELSPLTG 307

Query: 363 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELE 542
           RKHQLRVHCAEVLGTPIVGDYKYGWQAH+K  Q F S  +   D+ ++  K +  GL+LE
Sbjct: 308 RKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWKQLFQSNIEKNLDENLSNRKTHPFGLDLE 367

Query: 543 NGSISDKQPFLHLHCKEMILPNISLALQRGRIIS----NQMESIRLDAPLPAHMQRSWDL 710
           +GSI DKQP LHLHCK+M+LPN+SLALQ  ++ +    +++ES+   APLP+HMQRSWD+
Sbjct: 368 SGSILDKQPHLHLHCKQMVLPNVSLALQNLQLSAECDLSELESLEFVAPLPSHMQRSWDI 427

Query: 711 LN 716
           LN
Sbjct: 428 LN 429


>ref|XP_002282614.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
           [Vitis vinifera]
 emb|CBI40257.3| unnamed protein product, partial [Vitis vinifera]
          Length = 476

 Score =  327 bits (838), Expect = e-104
 Identities = 164/242 (67%), Positives = 195/242 (80%), Gaps = 4/242 (1%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQVSGSDRIVQKKYYALVIGSPRR 182
           LDRDSSGIL+MGRTQ S TILHSIFREKTFGASN+   +    RI+Q++Y+ALVIGSPRR
Sbjct: 236 LDRDSSGILIMGRTQTSATILHSIFREKTFGASNN--DIDTKKRILQRRYWALVIGSPRR 293

Query: 183 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 362
             GLIS PL KVVVD+GKSERIT+VDN  T+S QH+ TEYRVI SS  GYTWLELSPLTG
Sbjct: 294 PRGLISAPLGKVVVDDGKSERITIVDNVQTMSSQHAITEYRVIKSSCHGYTWLELSPLTG 353

Query: 363 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELE 542
           RKHQLRVHCAEVLGTPIVGDYKYGWQAH+K  Q F S  +   D+ ++  K +  GL+LE
Sbjct: 354 RKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWKQLFQSNIEKNLDENLSNRKTHPFGLDLE 413

Query: 543 NGSISDKQPFLHLHCKEMILPNISLALQRGRIIS----NQMESIRLDAPLPAHMQRSWDL 710
           +GSI DKQP LHLHCK+M+LPN+SLALQ  ++ +    +++ES+   APLP+HMQRSWD+
Sbjct: 414 SGSILDKQPHLHLHCKQMVLPNVSLALQNLQLSAECDLSELESLEFVAPLPSHMQRSWDI 473

Query: 711 LN 716
           LN
Sbjct: 474 LN 475


>ref|XP_022896844.1| RNA pseudouridine synthase 4, mitochondrial [Olea europaea var.
           sylvestris]
          Length = 464

 Score =  320 bits (819), Expect = e-101
 Identities = 171/242 (70%), Positives = 194/242 (80%), Gaps = 4/242 (1%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQVSGSDRIVQKKYYALVIGSPRR 182
           LDRDSSGILVMGRT LS TILHSIFREKTFGAS+DVL+   S R +QK+Y+ALVIGSPRR
Sbjct: 228 LDRDSSGILVMGRTLLSATILHSIFREKTFGASDDVLE---SKRSLQKRYWALVIGSPRR 284

Query: 183 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 362
             GLISVPL KVV+D+GKSE+ITVVD  H +S QH+ TEYRVISSS  GYTWLELSPLTG
Sbjct: 285 AGGLISVPLGKVVIDDGKSEKITVVDKFH-MSAQHAVTEYRVISSSSCGYTWLELSPLTG 343

Query: 363 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELE 542
           RKHQLRVHCAEVLGTPIVGDYKYGWQAHKK    F + SD + ++K +K K +  GL+LE
Sbjct: 344 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKSKHIFVN-SDCQLEEKNSKGKSDPFGLDLE 402

Query: 543 NGSISDKQPFLHLHCKEMILPNISLALQRGR----IISNQMESIRLDAPLPAHMQRSWDL 710
           NGSISDK   LHLHCK+M+LPNI+  L+R        S  +ESI +DA LP HMQRSWDL
Sbjct: 403 NGSISDKHFRLHLHCKQMLLPNIAQVLRRDNPDSDFDSKTVESITIDADLPPHMQRSWDL 462

Query: 711 LN 716
           LN
Sbjct: 463 LN 464


>ref|XP_017230138.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Daucus
           carota subsp. sativus]
 gb|KZN08989.1| hypothetical protein DCAR_001645 [Daucus carota subsp. sativus]
          Length = 453

 Score =  318 bits (815), Expect = e-101
 Identities = 167/243 (68%), Positives = 195/243 (80%), Gaps = 5/243 (2%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQVSGSDRIVQKKYYALVIGSPRR 182
           LDRDSSGILVMGRTQLSTTILHSIFREKTFGAS + L+      I+Q+KY+ALV G PRR
Sbjct: 215 LDRDSSGILVMGRTQLSTTILHSIFREKTFGASTEDLEEK--KEILQRKYWALVFGCPRR 272

Query: 183 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 362
           R+G IS+PL KVV+D+GKSERITVVDN +++  QH+ TEYRVI SS  GYTWLEL P TG
Sbjct: 273 RQGNISLPLGKVVMDDGKSERITVVDNANSMPSQHAITEYRVIGSSSHGYTWLELCPRTG 332

Query: 363 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSAS-DLKRDDKMTKFKHNIIGLEL 539
           RKHQLRVHCAEVLGTPIVGD+KYGWQAH+K   YF S++ +   D+K+ K K    GLEL
Sbjct: 333 RKHQLRVHCAEVLGTPIVGDFKYGWQAHRK---YFPSSNVEENLDEKLLKGKKIPFGLEL 389

Query: 540 ENGSISDKQPFLHLHCKEMILPNISLALQRGRIISNQ----MESIRLDAPLPAHMQRSWD 707
           E+GSISDK+P LHLHCKEM LPN+S AL R +  S Q    +ES++LDAPLP HMQRSWD
Sbjct: 390 EHGSISDKRPKLHLHCKEMTLPNVSTALDRAQRCSPQNFANLESLKLDAPLPYHMQRSWD 449

Query: 708 LLN 716
           +LN
Sbjct: 450 ILN 452


>ref|XP_016460522.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X3 [Nicotiana tabacum]
          Length = 365

 Score =  308 bits (790), Expect = 1e-98
 Identities = 155/242 (64%), Positives = 188/242 (77%), Gaps = 4/242 (1%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQVSGSDRIVQKKYYALVIGSPRR 182
           LDRD SGILVMGRTQLS ++LHS+FREKTFG   + L+     R++QK+Y+ALVIG PRR
Sbjct: 125 LDRDCSGILVMGRTQLSASVLHSVFREKTFGTQTEDLE--SKKRVLQKRYWALVIGCPRR 182

Query: 183 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 362
            +GLISVPL KVV+DNGKSERIT++ +    S Q + TEYR+I SS  GYTWLELSPLTG
Sbjct: 183 SKGLISVPLGKVVLDNGKSERITIMSDVREPSAQFAVTEYRIIGSSEKGYTWLELSPLTG 242

Query: 363 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELE 542
           RKHQLRVHCAEVLGTPIVGDYKYGWQAH+KL    +S S +    ++ + + +   L L 
Sbjct: 243 RKHQLRVHCAEVLGTPIVGDYKYGWQAHRKLKHLSSSTSIVNLGARILEQEADPFSLRLG 302

Query: 543 NGSISDKQPFLHLHCKEMILPNISLALQRGRIISN----QMESIRLDAPLPAHMQRSWDL 710
           NGSISDKQP LHLHCKEM+LPN SLALQ+ R++S      +ESI+L APLP+HMQ+SWD 
Sbjct: 303 NGSISDKQPHLHLHCKEMVLPNFSLALQQARVVSGADLVHVESIKLVAPLPSHMQKSWDC 362

Query: 711 LN 716
           L+
Sbjct: 363 LS 364


>ref|XP_018827854.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
           [Juglans regia]
          Length = 391

 Score =  308 bits (790), Expect = 3e-98
 Identities = 157/241 (65%), Positives = 192/241 (79%), Gaps = 4/241 (1%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQVSGSDRIVQKKYYALVIGSPRR 182
           LDRDSSGILVMGRTQ S  +LHSIFREKTFGA +DV       RI++++Y+ALVIGSPRR
Sbjct: 154 LDRDSSGILVMGRTQTSAAVLHSIFREKTFGAKDDV---DNEVRILERRYWALVIGSPRR 210

Query: 183 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 362
           ++GLISVPL KVVVDNGKS+RIT+VDN   +S QH+ T+Y+VI SS  GYTWLELSPLTG
Sbjct: 211 QKGLISVPLGKVVVDNGKSDRITIVDNAQNMSAQHALTKYQVIKSSCYGYTWLELSPLTG 270

Query: 363 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELE 542
           RKHQLRVHCAEVLGTPIVGD KYGWQAHKKL      + + +  + +TK K    GL+L+
Sbjct: 271 RKHQLRVHCAEVLGTPIVGDLKYGWQAHKKLKHLPWPSLERESHENVTKGKTIPFGLDLQ 330

Query: 543 NGSISDKQPFLHLHCKEMILPNISLALQRGRIIS----NQMESIRLDAPLPAHMQRSWDL 710
           +GSIS+K P LHLHCK+M+LPN+S+ALQ  +  S    +Q+ES+ L APLP++MQRSWD+
Sbjct: 331 SGSISEKHPRLHLHCKQMVLPNVSMALQNVQFSSDYHLSQVESLELVAPLPSYMQRSWDI 390

Query: 711 L 713
           L
Sbjct: 391 L 391


>ref|XP_019225818.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Nicotiana
           attenuata]
 gb|OIT32415.1| rna uridine synthase 4, mitochondrial [Nicotiana attenuata]
          Length = 464

 Score =  310 bits (794), Expect = 7e-98
 Identities = 156/242 (64%), Positives = 190/242 (78%), Gaps = 4/242 (1%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQVSGSDRIVQKKYYALVIGSPRR 182
           LDRD SGILVMGRTQLS ++LHS+FREKTFG   + L+     R++QK+Y+ALVIG PRR
Sbjct: 224 LDRDCSGILVMGRTQLSASVLHSVFREKTFGTQTEDLE--SKKRVLQKRYWALVIGCPRR 281

Query: 183 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 362
            +GLISVPL KVV+DNGKSERIT++ +    S Q + TEYR+I SS  GYTWLELSPLTG
Sbjct: 282 SKGLISVPLGKVVLDNGKSERITIMSDVREPSAQFAVTEYRIIGSSEKGYTWLELSPLTG 341

Query: 363 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELE 542
           RKHQLRVHCAEVLGTPIVGDYKYGWQAH+KL    +S S +    ++ + + +   L L 
Sbjct: 342 RKHQLRVHCAEVLGTPIVGDYKYGWQAHRKLKHLSSSTSIVNLGARIPEQEVDPFSLRLG 401

Query: 543 NGSISDKQPFLHLHCKEMILPNISLALQRGRIISN----QMESIRLDAPLPAHMQRSWDL 710
           NGSISDKQP LHLHCKEM+LPNISLALQ+ R++S+     +ESI+L APLP+HMQ+SWD 
Sbjct: 402 NGSISDKQPHLHLHCKEMVLPNISLALQQARVVSDADLVDVESIKLVAPLPSHMQKSWDC 461

Query: 711 LN 716
           L+
Sbjct: 462 LS 463


>gb|KZV33213.1| RNA pseudouridine synthase 4, mitochondrial-like [Dorcoceras
           hygrometricum]
          Length = 469

 Score =  310 bits (794), Expect = 8e-98
 Identities = 160/242 (66%), Positives = 189/242 (78%), Gaps = 5/242 (2%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQ-VSGSDRIVQKKYYALVIGSPR 179
           LDRD SGILVMGRT+L+ +ILHSIFREKTFGASND    V    + +QK+Y ALVIGSPR
Sbjct: 229 LDRDCSGILVMGRTKLTASILHSIFREKTFGASNDTRNLVVNRKKTLQKRYCALVIGSPR 288

Query: 180 RREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLT 359
           R+ GLIS PL KVVVDNG+SERITVVDN +TLS QH+ TEY+V++SS SGYTWLEL P T
Sbjct: 289 RQGGLISTPLGKVVVDNGRSERITVVDNTNTLSAQHAVTEYQVVASSSSGYTWLELYPHT 348

Query: 360 GRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLEL 539
           GRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKL     S SD + ++ ++K     + LEL
Sbjct: 349 GRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLKHIHASTSDCRWEENISK----NLNLEL 404

Query: 540 ENGSISDKQPFLHLHCKEMILPNISLALQRGRIIS----NQMESIRLDAPLPAHMQRSWD 707
           E   +S+K   LHLHCKEM+LPNISL L+ G +IS     +++ I++DAPLP HMQR WD
Sbjct: 405 EKAGVSNKTLPLHLHCKEMVLPNISLVLENGNMISGFDAERVDHIKIDAPLPPHMQRIWD 464

Query: 708 LL 713
           LL
Sbjct: 465 LL 466


>gb|PHT62613.1| RNA pseudouridine synthase 4, mitochondrial [Capsicum annuum]
          Length = 386

 Score =  307 bits (786), Expect = 1e-97
 Identities = 158/242 (65%), Positives = 186/242 (76%), Gaps = 4/242 (1%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQVSGSDRIVQKKYYALVIGSPRR 182
           LDRDSSG+LVMGRTQ+S + LHSIFREKTF   N+    S   RI+QKKY+ALVIG PRR
Sbjct: 146 LDRDSSGLLVMGRTQISASALHSIFREKTFDTQNEAYYYS--KRILQKKYWALVIGCPRR 203

Query: 183 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 362
             G+ISVPL KVV+DNGKSERIT++ +    S Q++ TEYR+I SS  GYTWLELSPLTG
Sbjct: 204 SGGIISVPLGKVVLDNGKSERITIMSDVRAPSAQYAVTEYRIIGSSGKGYTWLELSPLTG 263

Query: 363 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELE 542
           RKHQLRVHCAE LGTPIVGDYKYGWQAH+KL     S S L +  +  + K +   L L 
Sbjct: 264 RKHQLRVHCAEALGTPIVGDYKYGWQAHRKLKHLTCSTSALNQGMQNPRQKTDPFSLRLG 323

Query: 543 NGSISDKQPFLHLHCKEMILPNISLALQRGRIISN----QMESIRLDAPLPAHMQRSWDL 710
           NGSISDKQP LHLHCKEM+LPNISLALQ+G+ +S+     +ESI+L APLP HMQ+SWD 
Sbjct: 324 NGSISDKQPHLHLHCKEMVLPNISLALQQGQAVSDADLVDVESIKLVAPLPFHMQKSWDC 383

Query: 711 LN 716
           L+
Sbjct: 384 LS 385


>ref|XP_009629273.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X3
           [Nicotiana tomentosiformis]
          Length = 357

 Score =  305 bits (780), Expect = 3e-97
 Identities = 154/241 (63%), Positives = 187/241 (77%), Gaps = 4/241 (1%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQVSGSDRIVQKKYYALVIGSPRR 182
           LDRD SGILVMGRTQLS ++LHS+FREKTFG   + L+     R++QK+Y+ALVIG PRR
Sbjct: 117 LDRDCSGILVMGRTQLSASVLHSVFREKTFGTQTEDLE--SKKRVLQKRYWALVIGCPRR 174

Query: 183 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 362
            +G+ISVPL KVV+DNGKSERIT++ +    S Q + TEYR+I SS  GYTWLELSPLTG
Sbjct: 175 SKGVISVPLAKVVLDNGKSERITIMSDVREPSAQFAVTEYRIIGSSEKGYTWLELSPLTG 234

Query: 363 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELE 542
           RKHQLRVHCAEVLGTPIVGDYKYGWQAH+KL    +S S +    ++ + + +   L L 
Sbjct: 235 RKHQLRVHCAEVLGTPIVGDYKYGWQAHRKLKHLSSSISTVNLGARIPEQEADPFSLCLG 294

Query: 543 NGSISDKQPFLHLHCKEMILPNISLALQRGRIISN----QMESIRLDAPLPAHMQRSWDL 710
           NGSISDKQP LHLHCKEM+LPNISLALQ+ R++S      +ESI+L A LP+HMQ+SWD 
Sbjct: 295 NGSISDKQPHLHLHCKEMVLPNISLALQQARVVSGADLIDVESIKLVAHLPSHMQKSWDC 354

Query: 711 L 713
           L
Sbjct: 355 L 355


>ref|XP_018827853.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
           [Juglans regia]
          Length = 476

 Score =  308 bits (790), Expect = 4e-97
 Identities = 157/241 (65%), Positives = 192/241 (79%), Gaps = 4/241 (1%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQVSGSDRIVQKKYYALVIGSPRR 182
           LDRDSSGILVMGRTQ S  +LHSIFREKTFGA +DV       RI++++Y+ALVIGSPRR
Sbjct: 239 LDRDSSGILVMGRTQTSAAVLHSIFREKTFGAKDDV---DNEVRILERRYWALVIGSPRR 295

Query: 183 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 362
           ++GLISVPL KVVVDNGKS+RIT+VDN   +S QH+ T+Y+VI SS  GYTWLELSPLTG
Sbjct: 296 QKGLISVPLGKVVVDNGKSDRITIVDNAQNMSAQHALTKYQVIKSSCYGYTWLELSPLTG 355

Query: 363 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELE 542
           RKHQLRVHCAEVLGTPIVGD KYGWQAHKKL      + + +  + +TK K    GL+L+
Sbjct: 356 RKHQLRVHCAEVLGTPIVGDLKYGWQAHKKLKHLPWPSLERESHENVTKGKTIPFGLDLQ 415

Query: 543 NGSISDKQPFLHLHCKEMILPNISLALQRGRIIS----NQMESIRLDAPLPAHMQRSWDL 710
           +GSIS+K P LHLHCK+M+LPN+S+ALQ  +  S    +Q+ES+ L APLP++MQRSWD+
Sbjct: 416 SGSISEKHPRLHLHCKQMVLPNVSMALQNVQFSSDYHLSQVESLELVAPLPSYMQRSWDI 475

Query: 711 L 713
           L
Sbjct: 476 L 476


>ref|XP_019166408.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
           [Ipomoea nil]
 ref|XP_019166409.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
           [Ipomoea nil]
          Length = 469

 Score =  308 bits (789), Expect = 5e-97
 Identities = 164/244 (67%), Positives = 192/244 (78%), Gaps = 6/244 (2%)
 Frame = +3

Query: 3   LDRDSSGILVMGRTQLSTTILHSIFREKTFGASNDVLQVSGSDRIVQKKYYALVIGSPRR 182
           LDRD SGILVMGRTQLS T+LHSIFREKTF ASND      + R +QKKY+ALVIG PRR
Sbjct: 229 LDRDCSGILVMGRTQLSATVLHSIFREKTFEASND--DPESTKRTLQKKYWALVIGCPRR 286

Query: 183 REGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTG 362
             G+ISVPL KV++DNGKS+RITV+D++   S Q + TEYRVI +S  GYTWLELSPLTG
Sbjct: 287 GGGIISVPLGKVMMDNGKSDRITVMDDDKAQSAQFAVTEYRVIEASDKGYTWLELSPLTG 346

Query: 363 RKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYF-NSASD-LKRDDKMTKFKHNIIGLE 536
           RKHQLRVHCAEVLGTPI+GDY+YGWQAH+KL  +   SASD L+R   +   K +  GL 
Sbjct: 347 RKHQLRVHCAEVLGTPILGDYRYGWQAHRKLKHHLPRSASDTLERLPGVQ--KEDPFGLG 404

Query: 537 LENGSISDKQPFLHLHCKEMILPNISLALQRGRIISN----QMESIRLDAPLPAHMQRSW 704
           L NGS+SDKQP LHLHCKEM+LPNISLALQR + +S+     +E+I+L APLP HMQRSW
Sbjct: 405 LANGSVSDKQPHLHLHCKEMVLPNISLALQRAQQVSDGDLADVETIKLVAPLPPHMQRSW 464

Query: 705 DLLN 716
           D LN
Sbjct: 465 DHLN 468