BLASTX nr result
ID: Rehmannia30_contig00024410
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00024410
(721 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_019184983.1| PREDICTED: uncharacterized protein LOC109179... 72 6e-12
ref|XP_019231290.1| PREDICTED: replication protein A 70 kDa DNA-... 58 4e-06
ref|XP_019225412.1| PREDICTED: replication protein A 70 kDa DNA-... 58 4e-06
ref|XP_016509099.1| PREDICTED: replication protein A 70 kDa DNA-... 58 5e-06
ref|XP_016509098.1| PREDICTED: replication protein A 70 kDa DNA-... 58 5e-06
ref|XP_016509097.1| PREDICTED: replication protein A 70 kDa DNA-... 58 5e-06
ref|XP_016509096.1| PREDICTED: replication protein A 70 kDa DNA-... 58 5e-06
ref|XP_016509095.1| PREDICTED: replication protein A 70 kDa DNA-... 58 5e-06
ref|XP_019158770.1| PREDICTED: uncharacterized protein LOC109155... 57 6e-06
ref|XP_019181932.1| PREDICTED: replication protein A 70 kDa DNA-... 57 7e-06
>ref|XP_019184983.1| PREDICTED: uncharacterized protein LOC109179963 [Ipomoea nil]
Length = 156
Score = 71.6 bits (174), Expect = 6e-12
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = -3
Query: 185 VGSFWVCAKI--VSFIGEWWYLSCNKCLKKLEEAGEQLYCAKCDSQHDSGMFWYKIQFQT 12
VGS+WV A I + IG+WWYLSC +C KLE+A YC K D+ + G FWYK+ +
Sbjct: 77 VGSYWVLATILPIQTIGDWWYLSCKRCPIKLEQASNCFYCDKFDNSYPDGNFWYKLIIRV 136
Query: 11 VD 6
VD
Sbjct: 137 VD 138
>ref|XP_019231290.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
[Nicotiana attenuata]
Length = 316
Score = 57.8 bits (138), Expect = 4e-06
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = -3
Query: 179 SFWVCAKIVSFIGE--WWYLSCNKCLKKLEEAGEQLYCAKCDSQHDSGMFWYKIQFQTVD 6
S+W+ AK+V+ + W YL+CNKC +K+E+ G + +CAKC+ + S Y++Q + +D
Sbjct: 208 SYWIAAKLVNLELDRGWSYLACNKCSRKVEKVGNKYFCAKCNEEESSVTHRYRLQVRVMD 267
>ref|XP_019225412.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
[Nicotiana attenuata]
Length = 331
Score = 57.8 bits (138), Expect = 4e-06
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = -3
Query: 179 SFWVCAKIVSFIGE--WWYLSCNKCLKKLEEAGEQLYCAKCDSQHDSGMFWYKIQFQTVD 6
S+W+ AK+V+ + W YL+CNKC +K+E+ G + +CAKC+ + S Y++Q + +D
Sbjct: 94 SYWIAAKLVNLELDRGWSYLACNKCSRKVEKVGNRYFCAKCNEEESSVTHRYRLQVRVMD 153
>ref|XP_016509099.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
isoform X5 [Nicotiana tabacum]
Length = 435
Score = 57.8 bits (138), Expect = 5e-06
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = -3
Query: 179 SFWVCAKIVSFIGE--WWYLSCNKCLKKLEEAGEQLYCAKCDSQHDSGMFWYKIQFQTVD 6
S+W+ AK+V+ + W YL+CNKC +K+E+ G + +CAKC+ + S Y++Q + +D
Sbjct: 246 SYWIAAKLVNLELDRGWSYLACNKCSRKVEKVGNKYFCAKCNEEESSVTHRYRLQVRVMD 305
>ref|XP_016509098.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
isoform X4 [Nicotiana tabacum]
Length = 464
Score = 57.8 bits (138), Expect = 5e-06
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = -3
Query: 179 SFWVCAKIVSFIGE--WWYLSCNKCLKKLEEAGEQLYCAKCDSQHDSGMFWYKIQFQTVD 6
S+W+ AK+V+ + W YL+CNKC +K+E+ G + +CAKC+ + S Y++Q + +D
Sbjct: 246 SYWIAAKLVNLELDRGWSYLACNKCSRKVEKVGNKYFCAKCNEEESSVTHRYRLQVRVMD 305
>ref|XP_016509097.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
isoform X3 [Nicotiana tabacum]
Length = 496
Score = 57.8 bits (138), Expect = 5e-06
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = -3
Query: 179 SFWVCAKIVSFIGE--WWYLSCNKCLKKLEEAGEQLYCAKCDSQHDSGMFWYKIQFQTVD 6
S+W+ AK+V+ + W YL+CNKC +K+E+ G + +CAKC+ + S Y++Q + +D
Sbjct: 242 SYWIAAKLVNLELDRGWSYLACNKCSRKVEKVGNKYFCAKCNEEESSVTHRYRLQVRVMD 301
>ref|XP_016509096.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
isoform X2 [Nicotiana tabacum]
Length = 498
Score = 57.8 bits (138), Expect = 5e-06
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = -3
Query: 179 SFWVCAKIVSFIGE--WWYLSCNKCLKKLEEAGEQLYCAKCDSQHDSGMFWYKIQFQTVD 6
S+W+ AK+V+ + W YL+CNKC +K+E+ G + +CAKC+ + S Y++Q + +D
Sbjct: 244 SYWIAAKLVNLELDRGWSYLACNKCSRKVEKVGNKYFCAKCNEEESSVTHRYRLQVRVMD 303
>ref|XP_016509095.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
isoform X1 [Nicotiana tabacum]
Length = 500
Score = 57.8 bits (138), Expect = 5e-06
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = -3
Query: 179 SFWVCAKIVSFIGE--WWYLSCNKCLKKLEEAGEQLYCAKCDSQHDSGMFWYKIQFQTVD 6
S+W+ AK+V+ + W YL+CNKC +K+E+ G + +CAKC+ + S Y++Q + +D
Sbjct: 246 SYWIAAKLVNLELDRGWSYLACNKCSRKVEKVGNKYFCAKCNEEESSVTHRYRLQVRVMD 305
>ref|XP_019158770.1| PREDICTED: uncharacterized protein LOC109155606 [Ipomoea nil]
Length = 370
Score = 57.4 bits (137), Expect = 6e-06
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Frame = -3
Query: 182 GSFWVCAKIVSFI---GEWWYLSCN--KCLKKLEEAGEQLYCAKCDSQHDSGMFWYKIQF 18
G FWV A+IV FI GEW+Y SC C KKLE E LYC +CD G+ Y+I+
Sbjct: 259 GEFWVAARIV-FIDCDGEWYYPSCRTKSCYKKLEPKKEFLYCKECDRTWGDGILRYRIKI 317
Query: 17 QTVD 6
+ VD
Sbjct: 318 RVVD 321
>ref|XP_019181932.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit D-like
[Ipomoea nil]
Length = 519
Score = 57.4 bits (137), Expect = 7e-06
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Frame = -3
Query: 182 GSFWVCAKIVSFI---GEWWYLSCN--KCLKKLEEAGEQLYCAKCDSQHDSGMFWYKIQF 18
G FWV A+IV FI GEW+Y SC C KKLE E LYC +CD G+ Y+I+
Sbjct: 288 GEFWVAARIV-FIDCDGEWYYPSCRTKSCYKKLEPKKEFLYCKECDRTWGDGILRYRIKI 346
Query: 17 QTVD 6
+ VD
Sbjct: 347 RVVD 350