BLASTX nr result

ID: Rehmannia30_contig00023875 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00023875
         (387 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012850857.1| PREDICTED: clathrin light chain 1-like [Eryt...    75   2e-13
ref|XP_011085970.1| clathrin light chain 1 [Sesamum indicum]           74   7e-13
gb|PIN06267.1| Vesicle coat protein clathrin, light chain [Handr...    69   3e-11

>ref|XP_012850857.1| PREDICTED: clathrin light chain 1-like [Erythranthe guttata]
          Length = 368

 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 44/75 (58%), Positives = 52/75 (69%), Gaps = 11/75 (14%)
 Frame = +1

Query: 55  ATPKASEDGKEGKNGKD---ANTVASP-------KPTSPAKDAAKSATPKTPKPDEPS-A 201
           ATPKASE+GK+GK+GKD   A   A+P       K  SP+KDAAKS TPKTPK DE S  
Sbjct: 294 ATPKASEEGKDGKDGKDVKEATPKAAPAAGEKGEKAVSPSKDAAKSVTPKTPKTDESSVT 353

Query: 202 TEAEENVEKESSTIA 246
           TE ++N E ESST+A
Sbjct: 354 TEGKQNPETESSTVA 368


>ref|XP_011085970.1| clathrin light chain 1 [Sesamum indicum]
          Length = 367

 Score = 73.9 bits (180), Expect = 7e-13
 Identities = 39/68 (57%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
 Frame = +1

Query: 55  ATPKASEDGKEGKNGKDA----NTVASPKPTSPAKDAAKSATPKTPKPDEPSATEAEENV 222
           ATPKA +DGK+ K GK+A    +T A   P SPAKDAAK ATPKT K DE SA E ++ +
Sbjct: 300 ATPKALQDGKDNKGGKEATSSASTAAGETPISPAKDAAKGATPKTTKSDESSAVEGKQYI 359

Query: 223 EKESSTIA 246
           E E S IA
Sbjct: 360 ENEPSLIA 367


>gb|PIN06267.1| Vesicle coat protein clathrin, light chain [Handroanthus
           impetiginosus]
          Length = 352

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 37/64 (57%), Positives = 42/64 (65%)
 Frame = +1

Query: 55  ATPKASEDGKEGKNGKDANTVASPKPTSPAKDAAKSATPKTPKPDEPSATEAEENVEKES 234
           ATPKASE  K+    K A+  +  KP SP KDAAK ATPKTPKPDE S TE  +N E + 
Sbjct: 291 ATPKASEGVKDA--AKPASPASGAKPVSPTKDAAKVATPKTPKPDESSTTEGTQNEENDP 348

Query: 235 STIA 246
           S IA
Sbjct: 349 SIIA 352


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