BLASTX nr result
ID: Rehmannia30_contig00023775
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00023775
(1020 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009241985.1| ribosomal protein S3 (mitochondrion) [Oryza ... 136 2e-50
ref|YP_009242005.1| ribosomal protein S3 (mitochondrion) [Oryza ... 136 2e-50
ref|XP_012575409.1| PREDICTED: uncharacterized protein LOC105852... 87 5e-31
ref|YP_009381295.1| hypothetical protein AEK19_MT0893 (mitochond... 104 2e-24
gb|PHU21730.1| hypothetical protein BC332_06837 [Capsicum chinense] 105 6e-24
gb|EEF49599.1| conserved hypothetical protein [Ricinus communis] 96 5e-20
gb|KVF63445.1| hypothetical protein Ccrd_026728 [Cynara carduncu... 72 3e-12
ref|YP_009381296.1| hypothetical protein AEK19_MT0894 (mitochond... 65 4e-10
gb|KVI11367.1| cytochrome c oxidase subunit I [Cynara cardunculu... 69 1e-09
gb|PHT42507.1| hypothetical protein CQW23_16532 [Capsicum baccatum] 52 5e-07
gb|EEF26991.1| conserved hypothetical protein [Ricinus communis]... 57 6e-07
gb|EEF32829.1| conserved hypothetical protein [Ricinus communis] 56 2e-06
ref|XP_009800571.1| PREDICTED: uncharacterized protein LOC104246... 59 6e-06
>ref|YP_009241985.1| ribosomal protein S3 (mitochondrion) [Oryza minuta]
gb|AMA06704.1| ribosomal protein S3 (mitochondrion) [Oryza minuta]
Length = 1154
Score = 136 bits (343), Expect(2) = 2e-50
Identities = 81/124 (65%), Positives = 89/124 (71%)
Frame = +1
Query: 280 PWNQ*EKKC*VSDQ*ITRNERRDISRSAPKAHYAPLQQMRVFGGTGEPRELVRCVGQRAR 459
P + KC VS Q E+RD+SRSAP HYAPLQQMRVFGGTGEPRELVRCVGQRAR
Sbjct: 158 PQESIKNKCLVSFQISELTEKRDLSRSAP--HYAPLQQMRVFGGTGEPRELVRCVGQRAR 215
Query: 460 STC*RSYAVEGKEPKSTPFFLFFQRKKKKAVQGNFYLSRMRLSSYRPFRRALDLS**KPK 639
ST RSYAVEGKEPKSTPFFLF+ + +K + + SRMRLSSYR L LS KPK
Sbjct: 216 STSLRSYAVEGKEPKSTPFFLFYSKTQKHSTKR--LDSRMRLSSYRS-DAPLTLSCLKPK 272
Query: 640 TYLK 651
T K
Sbjct: 273 TLSK 276
Score = 92.4 bits (228), Expect(2) = 2e-50
Identities = 47/64 (73%), Positives = 51/64 (79%)
Frame = +3
Query: 3 ARRPLKDTQD*SMS*KKHTGRACFDRVSGAQLNVDIMNARCRIPGRETRATTPLCANR*R 182
ARRP ++T+D SMS K HTGRACFDRVSGAQLNVDIMNAR RIPGRETRA+TPL
Sbjct: 66 ARRPQEETRDQSMSSKTHTGRACFDRVSGAQLNVDIMNARIRIPGRETRASTPLMCRSLA 125
Query: 183 IQGP 194
GP
Sbjct: 126 HPGP 129
Score = 64.3 bits (155), Expect = 2e-07
Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Frame = +2
Query: 119 EVQDTRPRNPGNHSP-----MCQSLAHPGPRRPAQLERPSLI*EVLIRFG*TSFKNAAAL 283
++ + R R PG + MC+SLAHPGPRRPA LERPSLI +V +RFG T NA
Sbjct: 100 DIMNARIRIPGRETRASTPLMCRSLAHPGPRRPAPLERPSLISKVRLRFGLTDSANALPQ 159
Query: 284 -GINKKRSAKFQISE*PETKE 343
I K FQISE E ++
Sbjct: 160 ESIKNKCLVSFQISELTEKRD 180
>ref|YP_009242005.1| ribosomal protein S3 (mitochondrion) [Oryza minuta]
gb|AMQ23369.1| ribosomal protein S3 (mitochondrion) [Oryza minuta]
Length = 1150
Score = 136 bits (343), Expect(2) = 2e-50
Identities = 81/124 (65%), Positives = 89/124 (71%)
Frame = +1
Query: 280 PWNQ*EKKC*VSDQ*ITRNERRDISRSAPKAHYAPLQQMRVFGGTGEPRELVRCVGQRAR 459
P + KC VS Q E+RD+SRSAP HYAPLQQMRVFGGTGEPRELVRCVGQRAR
Sbjct: 158 PQESIKNKCLVSFQISELTEKRDLSRSAP--HYAPLQQMRVFGGTGEPRELVRCVGQRAR 215
Query: 460 STC*RSYAVEGKEPKSTPFFLFFQRKKKKAVQGNFYLSRMRLSSYRPFRRALDLS**KPK 639
ST RSYAVEGKEPKSTPFFLF+ + +K + + SRMRLSSYR L LS KPK
Sbjct: 216 STSLRSYAVEGKEPKSTPFFLFYSKTQKHSTKR--LDSRMRLSSYRS-DAPLTLSSLKPK 272
Query: 640 TYLK 651
T K
Sbjct: 273 TLSK 276
Score = 92.4 bits (228), Expect(2) = 2e-50
Identities = 47/64 (73%), Positives = 51/64 (79%)
Frame = +3
Query: 3 ARRPLKDTQD*SMS*KKHTGRACFDRVSGAQLNVDIMNARCRIPGRETRATTPLCANR*R 182
ARRP ++T+D SMS K HTGRACFDRVSGAQLNVDIMNAR RIPGRETRA+TPL
Sbjct: 66 ARRPQEETRDQSMSSKTHTGRACFDRVSGAQLNVDIMNARIRIPGRETRASTPLMCRSLA 125
Query: 183 IQGP 194
GP
Sbjct: 126 HPGP 129
Score = 64.3 bits (155), Expect = 2e-07
Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Frame = +2
Query: 119 EVQDTRPRNPGNHSP-----MCQSLAHPGPRRPAQLERPSLI*EVLIRFG*TSFKNAAAL 283
++ + R R PG + MC+SLAHPGPRRPA LERPSLI +V +RFG T NA
Sbjct: 100 DIMNARIRIPGRETRASTPLMCRSLAHPGPRRPAPLERPSLISKVRLRFGLTDSANALPQ 159
Query: 284 -GINKKRSAKFQISE*PETKE 343
I K FQISE E ++
Sbjct: 160 ESIKNKCLVSFQISELTEKRD 180
>ref|XP_012575409.1| PREDICTED: uncharacterized protein LOC105852994 [Cicer arietinum]
Length = 385
Score = 87.4 bits (215), Expect(2) = 5e-31
Identities = 54/119 (45%), Positives = 58/119 (48%)
Frame = -1
Query: 498 LLPFYCIAALAGTTSPLSHASNQLAWFTGSTENSHLLKRSIVRFRRRARNVSSFVSGYSX 319
L+PF +AALAGT SPLSHASNQLAWF GST+NSHLLK SIVRFRRRAR
Sbjct: 45 LIPFNYVAALAGTMSPLSHASNQLAWFIGSTKNSHLLKWSIVRFRRRAR----------- 93
Query: 318 XXXXXXXXXXXXXXXXXLNEVYPNRISTSQIRLGLSS*AGRRGPGCASDWHIGEWLPGF 142
+GPGCASD HIG PGF
Sbjct: 94 -----------------------------------------KGPGCASDRHIGVGCPGF 111
Score = 77.0 bits (188), Expect(2) = 5e-31
Identities = 37/50 (74%), Positives = 40/50 (80%)
Frame = -2
Query: 155 GCPGFSAWYPAPRVHDIYIQLCPGDTVEARPPSVLLSRHALVLGVFQWSS 6
GCPGFSAWYP PR+HDIYIQ G+TVEARPPSVLLSRH L L + SS
Sbjct: 107 GCPGFSAWYPTPRIHDIYIQ---GNTVEARPPSVLLSRHVLELAYNRLSS 153
>ref|YP_009381295.1| hypothetical protein AEK19_MT0893 (mitochondrion) [Utricularia
reniformis]
gb|ART30326.1| hypothetical protein AEK19_MT0893 (mitochondrion) [Utricularia
reniformis]
Length = 80
Score = 104 bits (259), Expect = 2e-24
Identities = 54/67 (80%), Positives = 56/67 (83%)
Frame = +1
Query: 358 SAPKAHYAPLQQMRVFGGTGEPRELVRCVGQRARSTC*RSYAVEGKEPKSTPFFLFFQRK 537
SAPKAHYAPLQQM VFGGTGEPRELVRCVGQRARSTC YAVEGKEPKST FF+
Sbjct: 3 SAPKAHYAPLQQMIVFGGTGEPRELVRCVGQRARSTCASRYAVEGKEPKSTLFFIL--DS 60
Query: 538 KKKAVQG 558
K KAV+G
Sbjct: 61 KIKAVKG 67
>gb|PHU21730.1| hypothetical protein BC332_06837 [Capsicum chinense]
Length = 152
Score = 105 bits (262), Expect = 6e-24
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +2
Query: 83 LRGTVECRYHEREVQDTRPRNPGNHSPMCQSLAHPGPRRPAQLERPSLI 229
++GTVECRYHEREVQDTRPRNPGNHSPMCQSLAHPGPRRP QLERPSLI
Sbjct: 104 MQGTVECRYHEREVQDTRPRNPGNHSPMCQSLAHPGPRRPTQLERPSLI 152
>gb|EEF49599.1| conserved hypothetical protein [Ricinus communis]
Length = 813
Score = 95.9 bits (237), Expect(2) = 5e-20
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -3
Query: 166 HRGVVARVSRPGILHLAFMISTFNCAPETRSKHARPVCFFHDML*SW 26
H GVVARVSRPGILHLAFMISTF CAPETRSKHARPVCFFHDML SW
Sbjct: 753 HMGVVARVSRPGILHLAFMISTFRCAPETRSKHARPVCFFHDMLWSW 799
Score = 31.6 bits (70), Expect(2) = 5e-20
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 201 GRRGPGCASDWHIG 160
GRRGPGCASD H+G
Sbjct: 742 GRRGPGCASDRHMG 755
>gb|KVF63445.1| hypothetical protein Ccrd_026728 [Cynara cardunculus var. scolymus]
Length = 83
Score = 72.0 bits (175), Expect = 3e-12
Identities = 44/88 (50%), Positives = 44/88 (50%)
Frame = +1
Query: 19 KTPRTRACRERSTLGGRASTVSPGHS*M*IS*TRGAGYQAEKPGQPLPYVXXXXXXXXXX 198
KTP RACRERSTL R YQAEK GQPLPYV
Sbjct: 16 KTPGPRACRERSTLDRR--------------------YQAEKAGQPLPYVPIASAARAPA 55
Query: 199 XXXXXXXXXDLRSANSVRIDFIQECRRP 282
DLRSANSVRIDFIQECRRP
Sbjct: 56 PSSAGEASPDLRSANSVRIDFIQECRRP 83
>ref|YP_009381296.1| hypothetical protein AEK19_MT0894 (mitochondrion) [Utricularia
reniformis]
gb|ART31124.1| hypothetical protein AEK19_MT0894 (mitochondrion) [Utricularia
reniformis]
Length = 41
Score = 64.7 bits (156), Expect = 4e-10
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 146 PGNHSPMCQSLAHPGPRRPAQLERPSLI 229
PGNHSPMCQSLAHPGPRRPAQLERPSLI
Sbjct: 14 PGNHSPMCQSLAHPGPRRPAQLERPSLI 41
>gb|KVI11367.1| cytochrome c oxidase subunit I [Cynara cardunculus var. scolymus]
Length = 276
Score = 69.3 bits (168), Expect = 1e-09
Identities = 33/45 (73%), Positives = 36/45 (80%)
Frame = -1
Query: 264 NEVYPNRISTSQIRLGLSS*AGRRGPGCASDWHIGEWLPGFLGLV 130
N+VYPNRI+TS IR GL S AG R PGC S+WHI E LPGFLGLV
Sbjct: 191 NKVYPNRINTSHIRQGLYSRAGHRVPGCTSNWHIEESLPGFLGLV 235
>gb|PHT42507.1| hypothetical protein CQW23_16532 [Capsicum baccatum]
Length = 201
Score = 52.4 bits (124), Expect(2) = 5e-07
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = +2
Query: 74 RPCLRGTVECRYHEREVQDTRPRNPGNHSPMCQSLAHPG 190
R + GT+EC YHE EVQD RP N NHSP+ Q L H G
Sbjct: 160 RASIVGTIECGYHELEVQDIRPINSSNHSPVYQPLVHSG 198
Score = 31.2 bits (69), Expect(2) = 5e-07
Identities = 17/26 (65%), Positives = 17/26 (65%)
Frame = +1
Query: 4 LEDH*KTPRTRACRERSTLGGRASTV 81
LEDH K R ACRERS L RAS V
Sbjct: 139 LEDHEKIFRIIACRERSVLDRRASIV 164
>gb|EEF26991.1| conserved hypothetical protein [Ricinus communis]
gb|EEF27071.1| conserved hypothetical protein [Ricinus communis]
Length = 94
Score = 57.4 bits (137), Expect = 6e-07
Identities = 27/31 (87%), Positives = 27/31 (87%)
Frame = +1
Query: 4 LEDH*KTPRTRACRERSTLGGRASTVSPGHS 96
LEDH P TRACRERSTLGGRASTVSPGHS
Sbjct: 64 LEDHRNIPGTRACRERSTLGGRASTVSPGHS 94
>gb|EEF32829.1| conserved hypothetical protein [Ricinus communis]
Length = 93
Score = 56.2 bits (134), Expect = 2e-06
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1
Query: 4 LEDH*KTPRTRACRERSTLGGRASTVSPGHS 96
+EDH P TRACRERSTLGGRASTVSPGHS
Sbjct: 63 VEDHRNIPGTRACRERSTLGGRASTVSPGHS 93
>ref|XP_009800571.1| PREDICTED: uncharacterized protein LOC104246460 isoform X1
[Nicotiana sylvestris]
ref|XP_016432628.1| PREDICTED: uncharacterized protein LOC107759258 isoform X1
[Nicotiana tabacum]
Length = 388
Score = 58.9 bits (141), Expect = 6e-06
Identities = 27/37 (72%), Positives = 29/37 (78%)
Frame = -1
Query: 492 PFYCIAALAGTTSPLSHASNQLAWFTGSTENSHLLKR 382
PF C+AALA TTSPLSHASNQL W T ENSH +KR
Sbjct: 347 PFDCVAALADTTSPLSHASNQLGWVTVFAENSHFVKR 383