BLASTX nr result
ID: Rehmannia30_contig00022987
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00022987
(417 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012850387.1| PREDICTED: regulator of nonsense transcripts... 171 3e-48
ref|XP_012850385.1| PREDICTED: regulator of nonsense transcripts... 167 1e-46
ref|XP_011092289.1| regulator of nonsense transcripts UPF3-like ... 165 7e-46
ref|XP_012842321.1| PREDICTED: regulator of nonsense transcripts... 151 8e-41
gb|ABP01544.1| UPF3, partial [Nicotiana attenuata] 142 1e-40
ref|XP_022876560.1| regulator of nonsense transcripts UPF3-like ... 145 2e-40
ref|XP_022862650.1| regulator of nonsense transcripts UPF3-like,... 149 5e-40
gb|OIT38698.1| regulator of nonsense transcripts upf3 [Nicotiana... 142 2e-39
ref|XP_016506834.1| PREDICTED: regulator of nonsense transcripts... 144 2e-38
ref|XP_016465252.1| PREDICTED: regulator of nonsense transcripts... 144 2e-38
ref|XP_009786002.1| PREDICTED: regulator of nonsense transcripts... 144 2e-38
ref|XP_018622443.1| PREDICTED: regulator of nonsense transcripts... 144 3e-38
ref|XP_009587163.1| PREDICTED: regulator of nonsense transcripts... 144 4e-38
gb|KZV48638.1| hypothetical protein F511_10324 [Dorcoceras hygro... 145 4e-38
ref|XP_019261105.1| PREDICTED: regulator of nonsense transcripts... 142 1e-37
ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts... 143 1e-37
ref|XP_019261104.1| PREDICTED: regulator of nonsense transcripts... 142 1e-37
ref|XP_019079129.1| PREDICTED: regulator of nonsense transcripts... 143 1e-37
ref|XP_019079128.1| PREDICTED: regulator of nonsense transcripts... 143 1e-37
ref|XP_019079126.1| PREDICTED: regulator of nonsense transcripts... 143 1e-37
>ref|XP_012850387.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Erythranthe guttata]
gb|EYU26454.1| hypothetical protein MIMGU_mgv1a004529mg [Erythranthe guttata]
Length = 521
Score = 171 bits (434), Expect = 3e-48
Identities = 94/140 (67%), Positives = 101/140 (72%), Gaps = 2/140 (1%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLN 182
EFLEFIAKPV NLPSAEIQLERKEAERAGAPK+ P+VTPLMDY+RQ TVLN
Sbjct: 120 EFLEFIAKPVVNLPSAEIQLERKEAERAGAPKNVPVVTPLMDYIRQKRAAKGGARRTVLN 179
Query: 183 GKPTRRVSGTSSRNPV--XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQ 356
GKP RRV GT SRN V MYVLRD+SKIV SK+ S Y L+ KQDDQ
Sbjct: 180 GKPARRVGGTPSRNLVSGSSRRGSEKRRTNTTMYVLRDNSKIVTSKENSAYSLISKQDDQ 239
Query: 357 QLIDKSVNSAAVSGNEALEG 416
QL+DKS NS AVSGNEALEG
Sbjct: 240 QLVDKSFNSTAVSGNEALEG 259
>ref|XP_012850385.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Erythranthe guttata]
gb|EYU26453.1| hypothetical protein MIMGU_mgv1a004529mg [Erythranthe guttata]
Length = 522
Score = 167 bits (422), Expect = 1e-46
Identities = 94/141 (66%), Positives = 101/141 (71%), Gaps = 3/141 (2%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQ-XXXXXXXXXXTVL 179
EFLEFIAKPV NLPSAEIQLERKEAERAGAPK+ P+VTPLMDY+RQ TVL
Sbjct: 120 EFLEFIAKPVVNLPSAEIQLERKEAERAGAPKNVPVVTPLMDYIRQKRAAKGGARQRTVL 179
Query: 180 NGKPTRRVSGTSSRNPV--XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDD 353
NGKP RRV GT SRN V MYVLRD+SKIV SK+ S Y L+ KQDD
Sbjct: 180 NGKPARRVGGTPSRNLVSGSSRRGSEKRRTNTTMYVLRDNSKIVTSKENSAYSLISKQDD 239
Query: 354 QQLIDKSVNSAAVSGNEALEG 416
QQL+DKS NS AVSGNEALEG
Sbjct: 240 QQLVDKSFNSTAVSGNEALEG 260
>ref|XP_011092289.1| regulator of nonsense transcripts UPF3-like [Sesamum indicum]
ref|XP_011092290.1| regulator of nonsense transcripts UPF3-like [Sesamum indicum]
ref|XP_011092291.1| regulator of nonsense transcripts UPF3-like [Sesamum indicum]
Length = 518
Score = 165 bits (417), Expect = 7e-46
Identities = 93/138 (67%), Positives = 99/138 (71%), Gaps = 1/138 (0%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLN 182
EFLEF+AKPVENLPSAEIQLERKEAERAGAPKD PIVTPLMDYVRQ T+LN
Sbjct: 120 EFLEFLAKPVENLPSAEIQLERKEAERAGAPKDVPIVTPLMDYVRQKRAAKGGARRTMLN 179
Query: 183 GKPTRRVSGTSSRNPV-XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 359
GK TRRV G SSR+PV MYVLRDSSK SK+K TYLLV KQDDQQ
Sbjct: 180 GKSTRRVGGISSRSPVSGSSKRGSEKRKTSTMYVLRDSSKGASSKEKPTYLLVPKQDDQQ 239
Query: 360 LIDKSVNSAAVSGNEALE 413
L +KS N AAVS +ALE
Sbjct: 240 LTEKSANLAAVSRTDALE 257
>ref|XP_012842321.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Erythranthe
guttata]
Length = 507
Score = 151 bits (382), Expect = 8e-41
Identities = 87/140 (62%), Positives = 96/140 (68%), Gaps = 2/140 (1%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLN 182
EFLE +AKPVENLPSAEIQLERKEA R GAPK P+VTPLM+YVRQ TVLN
Sbjct: 120 EFLELLAKPVENLPSAEIQLERKEAARVGAPKVPPVVTPLMEYVRQQRAAKGGARRTVLN 179
Query: 183 GKPTRRVSGTSSRNPV--XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQ 356
GK TR V+G SSR+P+ MYV+RD SK VGSKDK+ YLLV KQDDQ
Sbjct: 180 GKSTRGVTGISSRSPISGSSKRGSGKRRTSTTMYVVRDGSKGVGSKDKTPYLLVPKQDDQ 239
Query: 357 QLIDKSVNSAAVSGNEALEG 416
QL KS N AAVSG + LEG
Sbjct: 240 QL--KSANLAAVSGTDPLEG 257
>gb|ABP01544.1| UPF3, partial [Nicotiana attenuata]
Length = 168
Score = 142 bits (359), Expect = 1e-40
Identities = 82/139 (58%), Positives = 93/139 (66%), Gaps = 1/139 (0%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLN 182
EFLEF+AKPVENLPSAEIQLERKEAERAG+ KD PIVTPLMDY+RQ ++ N
Sbjct: 21 EFLEFLAKPVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKGGARRSISN 80
Query: 183 GKPTRRVSGTSSRNP-VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 359
G+ T+RV G SSR P MYVLRDSSK KDKS Y+LV K+DDQQ
Sbjct: 81 GRSTKRVGGASSRTPSSAASKRGSEKRTSTTMYVLRDSSKAGNGKDKS-YILVPKRDDQQ 139
Query: 360 LIDKSVNSAAVSGNEALEG 416
L DKS SA SG + +EG
Sbjct: 140 LSDKSGTSAPGSGIDLVEG 158
>ref|XP_022876560.1| regulator of nonsense transcripts UPF3-like isoform X1 [Olea
europaea var. sylvestris]
Length = 269
Score = 145 bits (366), Expect = 2e-40
Identities = 84/138 (60%), Positives = 92/138 (66%), Gaps = 1/138 (0%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLN 182
EFLEF+AKPVENLPSAEIQLERKE+ERAGAPKD PIVTPLMD+VRQ +VLN
Sbjct: 120 EFLEFLAKPVENLPSAEIQLERKESERAGAPKDPPIVTPLMDFVRQKRAAKSGTRRSVLN 179
Query: 183 GKPTRRVSGTSSRNP-VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 359
GKP +R SG SSR P MYV RDSSK V KDKS+Y+LV K+ DQQ
Sbjct: 180 GKPPKRSSGASSRTPSSGSSRRGSEKRTSTNMYVSRDSSKSVSGKDKSSYILV-KRGDQQ 238
Query: 360 LIDKSVNSAAVSGNEALE 413
D SV A SG ALE
Sbjct: 239 FSDTSVTLNAASGTAALE 256
>ref|XP_022862650.1| regulator of nonsense transcripts UPF3-like, partial [Olea europaea
var. sylvestris]
Length = 473
Score = 149 bits (375), Expect = 5e-40
Identities = 86/139 (61%), Positives = 94/139 (67%), Gaps = 2/139 (1%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLN 182
EFLEFIAKPVENLPSAEIQLERKE+ERAGAPKD PIVTPLMD+VRQ + LN
Sbjct: 96 EFLEFIAKPVENLPSAEIQLERKESERAGAPKDAPIVTPLMDFVRQRRAAKSGTRRSALN 155
Query: 183 GKPTRRVSGTSSRNP--VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQ 356
GKP +R SG SSR P MYV RD+SK V KDKSTY+LV K+DDQ
Sbjct: 156 GKPPKRGSGASSRTPNSGSSKRGSEKRRTSTTMYVSRDNSKAVSGKDKSTYILV-KRDDQ 214
Query: 357 QLIDKSVNSAAVSGNEALE 413
QL DKSV + SG ALE
Sbjct: 215 QLSDKSVILTSASGTAALE 233
>gb|OIT38698.1| regulator of nonsense transcripts upf3 [Nicotiana attenuata]
Length = 276
Score = 142 bits (359), Expect = 2e-39
Identities = 82/139 (58%), Positives = 93/139 (66%), Gaps = 1/139 (0%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLN 182
EFLEF+AKPVENLPSAEIQLERKEAERAG+ KD PIVTPLMDY+RQ ++ N
Sbjct: 118 EFLEFLAKPVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKGGARRSISN 177
Query: 183 GKPTRRVSGTSSRNP-VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 359
G+ T+RV G SSR P MYVLRDSSK KDKS Y+LV K+DDQQ
Sbjct: 178 GRSTKRVGGASSRTPSSAASKRGSEKRTSTTMYVLRDSSKAGNGKDKS-YILVPKRDDQQ 236
Query: 360 LIDKSVNSAAVSGNEALEG 416
L DKS SA SG + +EG
Sbjct: 237 LSDKSGTSAPGSGIDLVEG 255
>ref|XP_016506834.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Nicotiana
tabacum]
Length = 469
Score = 144 bits (364), Expect = 2e-38
Identities = 83/139 (59%), Positives = 94/139 (67%), Gaps = 1/139 (0%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLN 182
EFLEF+AKPVENLPSAEIQLERKEAERAG+ KD PIVTPLMDY+RQ ++ N
Sbjct: 118 EFLEFLAKPVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARRSISN 177
Query: 183 GKPTRRVSGTSSRNP-VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 359
G+ T+RV GTSSR P MYVLRDSSK KDKS Y+LV K+DDQQ
Sbjct: 178 GRSTKRVGGTSSRTPSSAASKRGSEKRTSTTMYVLRDSSKAGNGKDKS-YILVPKRDDQQ 236
Query: 360 LIDKSVNSAAVSGNEALEG 416
L DKS SA SG + +EG
Sbjct: 237 LSDKSGTSAPGSGIDLVEG 255
>ref|XP_016465252.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Nicotiana
tabacum]
Length = 469
Score = 144 bits (364), Expect = 2e-38
Identities = 83/139 (59%), Positives = 94/139 (67%), Gaps = 1/139 (0%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLN 182
EFLEF+AKPVENLPSAEIQLERKEAERAG+ KD PIVTPLMDY+RQ ++ N
Sbjct: 118 EFLEFLAKPVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARRSISN 177
Query: 183 GKPTRRVSGTSSRNP-VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 359
G+ T+RV GTSSR P MYVLRDSSK KDKS Y+LV K+DDQQ
Sbjct: 178 GRSTKRVGGTSSRTPSSAASKRGSEKRTSTTMYVLRDSSKAGNGKDKS-YILVPKRDDQQ 236
Query: 360 LIDKSVNSAAVSGNEALEG 416
L DKS SA SG + +EG
Sbjct: 237 LSDKSRTSAPGSGIDLVEG 255
>ref|XP_009786002.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Nicotiana
sylvestris]
Length = 469
Score = 144 bits (364), Expect = 2e-38
Identities = 83/139 (59%), Positives = 94/139 (67%), Gaps = 1/139 (0%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLN 182
EFLEF+AKPVENLPSAEIQLERKEAERAG+ KD PIVTPLMDY+RQ ++ N
Sbjct: 118 EFLEFLAKPVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARRSISN 177
Query: 183 GKPTRRVSGTSSRNP-VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 359
G+ T+RV GTSSR P MYVLRDSSK KDKS Y+LV K+DDQQ
Sbjct: 178 GRSTKRVGGTSSRTPSSAASKRGSEKRTSTTMYVLRDSSKAGNGKDKS-YILVPKRDDQQ 236
Query: 360 LIDKSVNSAAVSGNEALEG 416
L DKS SA SG + +EG
Sbjct: 237 LSDKSRTSAPGSGIDLVEG 255
>ref|XP_018622443.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Nicotiana tomentosiformis]
Length = 457
Score = 144 bits (362), Expect = 3e-38
Identities = 83/139 (59%), Positives = 94/139 (67%), Gaps = 1/139 (0%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLN 182
EFLEF+AKPVENLPSAEIQLERKEAERAG+ KD PIVTPLMDY+RQ ++ N
Sbjct: 118 EFLEFLAKPVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARRSLSN 177
Query: 183 GKPTRRVSGTSSRNP-VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 359
G+ T+RV GTSSR P MYVLRDSSK KDKS Y+LV K+DDQQ
Sbjct: 178 GRSTKRVGGTSSRTPSSAASKRGSEKRTSTTMYVLRDSSKAGNGKDKS-YILVPKRDDQQ 236
Query: 360 LIDKSVNSAAVSGNEALEG 416
L DKS SA SG + +EG
Sbjct: 237 LSDKSGTSAPGSGIDLVEG 255
>ref|XP_009587163.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Nicotiana tomentosiformis]
Length = 469
Score = 144 bits (362), Expect = 4e-38
Identities = 83/139 (59%), Positives = 94/139 (67%), Gaps = 1/139 (0%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLN 182
EFLEF+AKPVENLPSAEIQLERKEAERAG+ KD PIVTPLMDY+RQ ++ N
Sbjct: 118 EFLEFLAKPVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARRSLSN 177
Query: 183 GKPTRRVSGTSSRNP-VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 359
G+ T+RV GTSSR P MYVLRDSSK KDKS Y+LV K+DDQQ
Sbjct: 178 GRSTKRVGGTSSRTPSSAASKRGSEKRTSTTMYVLRDSSKAGNGKDKS-YILVPKRDDQQ 236
Query: 360 LIDKSVNSAAVSGNEALEG 416
L DKS SA SG + +EG
Sbjct: 237 LSDKSGTSAPGSGIDLVEG 255
>gb|KZV48638.1| hypothetical protein F511_10324 [Dorcoceras hygrometricum]
Length = 587
Score = 145 bits (366), Expect = 4e-38
Identities = 76/138 (55%), Positives = 94/138 (68%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLN 182
EFL+ +AKP ENLPSAE+QLERKEAER GAPKD PIVTPLM+YVRQ T+LN
Sbjct: 120 EFLDCLAKPAENLPSAEVQLERKEAERVGAPKDTPIVTPLMEYVRQKRAARGGARRTILN 179
Query: 183 GKPTRRVSGTSSRNPVXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQL 362
GKP R++SG +RN MYVLR+SSK SKDKS+ + V K D+Q+
Sbjct: 180 GKPARKISGMLTRNTGSGSSRGGSEKRTSTMYVLRESSKGASSKDKSSSIPVFKHDEQRN 239
Query: 363 IDKSVNSAAVSGNEALEG 416
++KSVNSAA+S ++ EG
Sbjct: 240 LEKSVNSAAISRTDSSEG 257
>ref|XP_019261105.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Nicotiana attenuata]
Length = 469
Score = 142 bits (359), Expect = 1e-37
Identities = 82/139 (58%), Positives = 93/139 (66%), Gaps = 1/139 (0%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLN 182
EFLEF+AKPVENLPSAEIQLERKEAERAG+ KD PIVTPLMDY+RQ ++ N
Sbjct: 118 EFLEFLAKPVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKGGARRSISN 177
Query: 183 GKPTRRVSGTSSRNP-VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 359
G+ T+RV G SSR P MYVLRDSSK KDKS Y+LV K+DDQQ
Sbjct: 178 GRSTKRVGGASSRTPSSAASKRGSEKRTSTTMYVLRDSSKAGNGKDKS-YILVPKRDDQQ 236
Query: 360 LIDKSVNSAAVSGNEALEG 416
L DKS SA SG + +EG
Sbjct: 237 LSDKSGTSAPGSGIDLVEG 255
>ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X4 [Vitis
vinifera]
emb|CBI29694.3| unnamed protein product, partial [Vitis vinifera]
Length = 519
Score = 143 bits (361), Expect = 1e-37
Identities = 81/139 (58%), Positives = 95/139 (68%), Gaps = 2/139 (1%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLN 182
EF+E +AKPVENLPSAEIQLER+EAERAGA KD PIVTPLMD+VRQ ++ N
Sbjct: 120 EFVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSN 179
Query: 183 GKPTRRVSGTSSRNPV--XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQ 356
GK +RR SG+SS NP MYVLRD++K +KDKST++LV K+DDQ
Sbjct: 180 GKLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQ 239
Query: 357 QLIDKSVNSAAVSGNEALE 413
L DKSVN AA G EALE
Sbjct: 240 LLSDKSVNLAAGGGAEALE 258
>ref|XP_019261104.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Nicotiana attenuata]
Length = 475
Score = 142 bits (359), Expect = 1e-37
Identities = 82/139 (58%), Positives = 93/139 (66%), Gaps = 1/139 (0%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLN 182
EFLEF+AKPVENLPSAEIQLERKEAERAG+ KD PIVTPLMDY+RQ ++ N
Sbjct: 118 EFLEFLAKPVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKGGARRSISN 177
Query: 183 GKPTRRVSGTSSRNP-VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 359
G+ T+RV G SSR P MYVLRDSSK KDKS Y+LV K+DDQQ
Sbjct: 178 GRSTKRVGGASSRTPSSAASKRGSEKRTSTTMYVLRDSSKAGNGKDKS-YILVPKRDDQQ 236
Query: 360 LIDKSVNSAAVSGNEALEG 416
L DKS SA SG + +EG
Sbjct: 237 LSDKSGTSAPGSGIDLVEG 255
>ref|XP_019079129.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X3 [Vitis
vinifera]
Length = 528
Score = 143 bits (361), Expect = 1e-37
Identities = 81/139 (58%), Positives = 95/139 (68%), Gaps = 2/139 (1%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLN 182
EF+E +AKPVENLPSAEIQLER+EAERAGA KD PIVTPLMD+VRQ ++ N
Sbjct: 120 EFVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSN 179
Query: 183 GKPTRRVSGTSSRNPV--XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQ 356
GK +RR SG+SS NP MYVLRD++K +KDKST++LV K+DDQ
Sbjct: 180 GKLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQ 239
Query: 357 QLIDKSVNSAAVSGNEALE 413
L DKSVN AA G EALE
Sbjct: 240 LLSDKSVNLAAGGGAEALE 258
>ref|XP_019079128.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X2 [Vitis
vinifera]
Length = 529
Score = 143 bits (361), Expect = 1e-37
Identities = 81/139 (58%), Positives = 95/139 (68%), Gaps = 2/139 (1%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLN 182
EF+E +AKPVENLPSAEIQLER+EAERAGA KD PIVTPLMD+VRQ ++ N
Sbjct: 120 EFVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSN 179
Query: 183 GKPTRRVSGTSSRNPV--XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQ 356
GK +RR SG+SS NP MYVLRD++K +KDKST++LV K+DDQ
Sbjct: 180 GKLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQ 239
Query: 357 QLIDKSVNSAAVSGNEALE 413
L DKSVN AA G EALE
Sbjct: 240 LLSDKSVNLAAGGGAEALE 258
>ref|XP_019079126.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Vitis
vinifera]
ref|XP_019079127.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Vitis
vinifera]
Length = 533
Score = 143 bits (361), Expect = 1e-37
Identities = 81/139 (58%), Positives = 95/139 (68%), Gaps = 2/139 (1%)
Frame = +3
Query: 3 EFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLN 182
EF+E +AKPVENLPSAEIQLER+EAERAGA KD PIVTPLMD+VRQ ++ N
Sbjct: 120 EFVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSN 179
Query: 183 GKPTRRVSGTSSRNPV--XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQ 356
GK +RR SG+SS NP MYVLRD++K +KDKST++LV K+DDQ
Sbjct: 180 GKLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQ 239
Query: 357 QLIDKSVNSAAVSGNEALE 413
L DKSVN AA G EALE
Sbjct: 240 LLSDKSVNLAAGGGAEALE 258