BLASTX nr result
ID: Rehmannia30_contig00022559
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00022559
(474 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PHT78807.1| Replication factor C subunit 5 [Capsicum annuum] 122 8e-33
ref|XP_011069427.1| replication factor C subunit 3 [Sesamum indi... 128 9e-33
gb|PIN17049.1| Replication factor C, subunit RFC5 [Handroanthus ... 128 1e-32
ref|XP_012844118.1| PREDICTED: replication factor C subunit 5 [E... 126 5e-32
ref|XP_022865767.1| replication factor C subunit 3 [Olea europae... 123 1e-30
ref|XP_016575185.1| PREDICTED: replication factor C subunit 3 is... 122 1e-30
gb|PHT45442.1| Replication factor C subunit 5 [Capsicum baccatum... 122 2e-30
ref|XP_016575184.1| PREDICTED: replication factor C subunit 3 is... 122 3e-30
gb|POE95849.1| replication factor c subunit 3 [Quercus suber] 121 3e-30
ref|XP_006365532.1| PREDICTED: replication factor C subunit 3 [S... 120 7e-30
ref|XP_019247689.1| PREDICTED: replication factor C subunit 5 [N... 120 7e-30
ref|XP_009801157.1| PREDICTED: replication factor C subunit 3 [N... 120 7e-30
ref|XP_009629771.1| PREDICTED: replication factor C subunit 3 [N... 120 7e-30
ref|XP_023924304.1| replication factor C subunit 3 [Quercus suber] 121 7e-30
ref|XP_021896370.1| replication factor C subunit 3 [Carica papaya] 120 2e-29
ref|XP_004242038.1| PREDICTED: replication factor C subunit 3 [S... 119 2e-29
ref|XP_002520343.1| PREDICTED: replication factor C subunit 3 [R... 119 4e-29
ref|XP_018844703.1| PREDICTED: replication factor C subunit 3 is... 119 4e-29
ref|XP_018844702.1| PREDICTED: replication factor C subunit 3 is... 119 4e-29
ref|XP_015077024.1| PREDICTED: replication factor C subunit 3 [S... 118 5e-29
>gb|PHT78807.1| Replication factor C subunit 5 [Capsicum annuum]
Length = 122
Score = 122 bits (305), Expect = 8e-33
Identities = 61/70 (87%), Positives = 64/70 (91%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
E F SCKRISEIKTRKGLALVDIVREVTMFVFKIKMP DVR+QLINEMADVEYRL+ C
Sbjct: 38 EPFAISCKRISEIKTRKGLALVDIVREVTMFVFKIKMPADVRVQLINEMADVEYRLTFGC 97
Query: 182 SDKLQLGSLI 211
+DKLQLGSLI
Sbjct: 98 NDKLQLGSLI 107
>ref|XP_011069427.1| replication factor C subunit 3 [Sesamum indicum]
Length = 366
Score = 128 bits (322), Expect = 9e-33
Identities = 64/70 (91%), Positives = 68/70 (97%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
E FTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMP DVRIQLINEMA++EYRLSLAC
Sbjct: 282 EPFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPSDVRIQLINEMAEIEYRLSLAC 341
Query: 182 SDKLQLGSLI 211
+DKLQLGSL+
Sbjct: 342 NDKLQLGSLV 351
>gb|PIN17049.1| Replication factor C, subunit RFC5 [Handroanthus impetiginosus]
Length = 368
Score = 128 bits (322), Expect = 1e-32
Identities = 64/70 (91%), Positives = 69/70 (98%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
ESFTTSC+RISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLIN+MAD+EYRLSLA
Sbjct: 284 ESFTTSCQRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINDMADIEYRLSLAS 343
Query: 182 SDKLQLGSLI 211
+DKLQLGSL+
Sbjct: 344 NDKLQLGSLV 353
>ref|XP_012844118.1| PREDICTED: replication factor C subunit 5 [Erythranthe guttata]
gb|EYU31769.1| hypothetical protein MIMGU_mgv1a008738mg [Erythranthe guttata]
Length = 364
Score = 126 bits (317), Expect = 5e-32
Identities = 61/70 (87%), Positives = 68/70 (97%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
E FTT+CKRISEIKTRKGLALVDIVREVTMFVFKI MPP+VR+QLINEMAD+EYRLSLAC
Sbjct: 280 EPFTTACKRISEIKTRKGLALVDIVREVTMFVFKIMMPPEVRVQLINEMADIEYRLSLAC 339
Query: 182 SDKLQLGSLI 211
+D+LQLGSL+
Sbjct: 340 NDRLQLGSLV 349
>ref|XP_022865767.1| replication factor C subunit 3 [Olea europaea var. sylvestris]
Length = 364
Score = 123 bits (308), Expect = 1e-30
Identities = 59/69 (85%), Positives = 66/69 (95%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
E F T+CKRISEIKTRKGLALVDIVREVTMFVFKIKMPP+VR+QLINE+AD+EYRL+ AC
Sbjct: 280 EPFATTCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPEVRVQLINELADIEYRLTFAC 339
Query: 182 SDKLQLGSL 208
+DKLQLGSL
Sbjct: 340 NDKLQLGSL 348
>ref|XP_016575185.1| PREDICTED: replication factor C subunit 3 isoform X2 [Capsicum
annuum]
Length = 315
Score = 122 bits (305), Expect = 1e-30
Identities = 61/70 (87%), Positives = 64/70 (91%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
E F SCKRISEIKTRKGLALVDIVREVTMFVFKIKMP DVR+QLINEMADVEYRL+ C
Sbjct: 231 EPFAISCKRISEIKTRKGLALVDIVREVTMFVFKIKMPADVRVQLINEMADVEYRLTFGC 290
Query: 182 SDKLQLGSLI 211
+DKLQLGSLI
Sbjct: 291 NDKLQLGSLI 300
>gb|PHT45442.1| Replication factor C subunit 5 [Capsicum baccatum]
gb|PHU14600.1| Replication factor C subunit 5 [Capsicum chinense]
Length = 358
Score = 122 bits (305), Expect = 2e-30
Identities = 61/70 (87%), Positives = 64/70 (91%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
E F SCKRISEIKTRKGLALVDIVREVTMFVFKIKMP DVR+QLINEMADVEYRL+ C
Sbjct: 274 EPFAISCKRISEIKTRKGLALVDIVREVTMFVFKIKMPADVRVQLINEMADVEYRLTFGC 333
Query: 182 SDKLQLGSLI 211
+DKLQLGSLI
Sbjct: 334 NDKLQLGSLI 343
>ref|XP_016575184.1| PREDICTED: replication factor C subunit 3 isoform X1 [Capsicum
annuum]
Length = 360
Score = 122 bits (305), Expect = 3e-30
Identities = 61/70 (87%), Positives = 64/70 (91%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
E F SCKRISEIKTRKGLALVDIVREVTMFVFKIKMP DVR+QLINEMADVEYRL+ C
Sbjct: 276 EPFAISCKRISEIKTRKGLALVDIVREVTMFVFKIKMPADVRVQLINEMADVEYRLTFGC 335
Query: 182 SDKLQLGSLI 211
+DKLQLGSLI
Sbjct: 336 NDKLQLGSLI 345
>gb|POE95849.1| replication factor c subunit 3 [Quercus suber]
Length = 353
Score = 121 bits (304), Expect = 3e-30
Identities = 60/70 (85%), Positives = 67/70 (95%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
ESFT S KRISE+KTRKGLALVDIVREVTMFVFKIKMP D+R+QLIN+MAD+EYRLSLAC
Sbjct: 269 ESFTESFKRISEMKTRKGLALVDIVREVTMFVFKIKMPSDIRVQLINDMADIEYRLSLAC 328
Query: 182 SDKLQLGSLI 211
+D+LQLGSLI
Sbjct: 329 NDRLQLGSLI 338
>ref|XP_006365532.1| PREDICTED: replication factor C subunit 3 [Solanum tuberosum]
Length = 357
Score = 120 bits (302), Expect = 7e-30
Identities = 60/70 (85%), Positives = 64/70 (91%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
E FT SCKRISEIKTRKGLALVDIVREVTMFVFKIKMP VR+QLINEMAD+EYRL+ C
Sbjct: 273 EPFTISCKRISEIKTRKGLALVDIVREVTMFVFKIKMPATVRVQLINEMADIEYRLTFGC 332
Query: 182 SDKLQLGSLI 211
+DKLQLGSLI
Sbjct: 333 NDKLQLGSLI 342
>ref|XP_019247689.1| PREDICTED: replication factor C subunit 5 [Nicotiana attenuata]
gb|OIT02377.1| replication factor c subunit 3 [Nicotiana attenuata]
Length = 360
Score = 120 bits (302), Expect = 7e-30
Identities = 59/70 (84%), Positives = 65/70 (92%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
E F SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPP+VR+QLINEMA++EYRL+ C
Sbjct: 276 EPFAISCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPNVRVQLINEMANIEYRLTFGC 335
Query: 182 SDKLQLGSLI 211
+DKLQLGSLI
Sbjct: 336 NDKLQLGSLI 345
>ref|XP_009801157.1| PREDICTED: replication factor C subunit 3 [Nicotiana sylvestris]
ref|XP_016504541.1| PREDICTED: replication factor C subunit 3-like [Nicotiana tabacum]
Length = 360
Score = 120 bits (302), Expect = 7e-30
Identities = 59/70 (84%), Positives = 65/70 (92%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
E F SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPP+VR+QLINEMA++EYRL+ C
Sbjct: 276 EPFALSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPNVRVQLINEMANIEYRLTFGC 335
Query: 182 SDKLQLGSLI 211
+DKLQLGSLI
Sbjct: 336 NDKLQLGSLI 345
>ref|XP_009629771.1| PREDICTED: replication factor C subunit 3 [Nicotiana
tomentosiformis]
ref|XP_016481805.1| PREDICTED: replication factor C subunit 3-like [Nicotiana tabacum]
Length = 360
Score = 120 bits (302), Expect = 7e-30
Identities = 59/70 (84%), Positives = 65/70 (92%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
E F SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPP+VR+QLINEMA++EYRL+ C
Sbjct: 276 EPFAISCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPNVRVQLINEMANIEYRLTFGC 335
Query: 182 SDKLQLGSLI 211
+DKLQLGSLI
Sbjct: 336 NDKLQLGSLI 345
>ref|XP_023924304.1| replication factor C subunit 3 [Quercus suber]
Length = 405
Score = 121 bits (304), Expect = 7e-30
Identities = 60/70 (85%), Positives = 67/70 (95%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
ESFT S KRISE+KTRKGLALVDIVREVTMFVFKIKMP D+R+QLIN+MAD+EYRLSLAC
Sbjct: 321 ESFTESFKRISEMKTRKGLALVDIVREVTMFVFKIKMPSDIRVQLINDMADIEYRLSLAC 380
Query: 182 SDKLQLGSLI 211
+D+LQLGSLI
Sbjct: 381 NDRLQLGSLI 390
>ref|XP_021896370.1| replication factor C subunit 3 [Carica papaya]
Length = 367
Score = 120 bits (300), Expect = 2e-29
Identities = 60/70 (85%), Positives = 66/70 (94%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
ESFT S KRISEIKTRKGLALVDIVREVTMFVFKIKMP DVRIQLIN++AD+EYRLS+ C
Sbjct: 282 ESFTESFKRISEIKTRKGLALVDIVREVTMFVFKIKMPSDVRIQLINDLADIEYRLSVGC 341
Query: 182 SDKLQLGSLI 211
+DKLQ+GSLI
Sbjct: 342 NDKLQMGSLI 351
>ref|XP_004242038.1| PREDICTED: replication factor C subunit 3 [Solanum lycopersicum]
Length = 357
Score = 119 bits (299), Expect = 2e-29
Identities = 59/70 (84%), Positives = 64/70 (91%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
E F SCKRISEIKTRKGLALVDIVREVTMFVFKIKMP +VR+QLINEMAD+EYRL+ C
Sbjct: 273 EPFAISCKRISEIKTRKGLALVDIVREVTMFVFKIKMPANVRVQLINEMADIEYRLTFGC 332
Query: 182 SDKLQLGSLI 211
+DKLQLGSLI
Sbjct: 333 NDKLQLGSLI 342
>ref|XP_002520343.1| PREDICTED: replication factor C subunit 3 [Ricinus communis]
gb|EEF42129.1| replication factor C / DNA polymerase III gamma-tau subunit,
putative [Ricinus communis]
Length = 360
Score = 119 bits (297), Expect = 4e-29
Identities = 59/70 (84%), Positives = 64/70 (91%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
ESF S KRISEIKT+KGLALVDIVREVTMFVFKIKMP DVR+QLIN+MAD+EYRLS C
Sbjct: 276 ESFAESFKRISEIKTKKGLALVDIVREVTMFVFKIKMPSDVRVQLINDMADIEYRLSFGC 335
Query: 182 SDKLQLGSLI 211
SDKLQLGSL+
Sbjct: 336 SDKLQLGSLV 345
>ref|XP_018844703.1| PREDICTED: replication factor C subunit 3 isoform X2 [Juglans
regia]
Length = 367
Score = 119 bits (297), Expect = 4e-29
Identities = 59/70 (84%), Positives = 66/70 (94%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
ESF+ S KRISE+KTRKGLALVDIVREVTMFVFKIKMP DVR+QLIN++AD+EYRLSL C
Sbjct: 283 ESFSESFKRISEMKTRKGLALVDIVREVTMFVFKIKMPSDVRVQLINDLADIEYRLSLGC 342
Query: 182 SDKLQLGSLI 211
+DKLQLGSLI
Sbjct: 343 NDKLQLGSLI 352
>ref|XP_018844702.1| PREDICTED: replication factor C subunit 3 isoform X1 [Juglans
regia]
Length = 368
Score = 119 bits (297), Expect = 4e-29
Identities = 59/70 (84%), Positives = 66/70 (94%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
ESF+ S KRISE+KTRKGLALVDIVREVTMFVFKIKMP DVR+QLIN++AD+EYRLSL C
Sbjct: 284 ESFSESFKRISEMKTRKGLALVDIVREVTMFVFKIKMPSDVRVQLINDLADIEYRLSLGC 343
Query: 182 SDKLQLGSLI 211
+DKLQLGSLI
Sbjct: 344 NDKLQLGSLI 353
>ref|XP_015077024.1| PREDICTED: replication factor C subunit 3 [Solanum pennellii]
Length = 357
Score = 118 bits (296), Expect = 5e-29
Identities = 58/70 (82%), Positives = 64/70 (91%)
Frame = +2
Query: 2 ESFTTSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLAC 181
E F SCKRI+EIKTRKGLALVDIVREVTMFVFKIKMP +VR+QLINEMAD+EYRL+ C
Sbjct: 273 EPFAISCKRIAEIKTRKGLALVDIVREVTMFVFKIKMPANVRVQLINEMADIEYRLTFGC 332
Query: 182 SDKLQLGSLI 211
+DKLQLGSLI
Sbjct: 333 NDKLQLGSLI 342