BLASTX nr result

ID: Rehmannia30_contig00022408 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00022408
         (527 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN01405.1| WD40 repeat protein [Handroanthus impetiginosus]        58   1e-06
ref|XP_011089371.1| DDB1- and CUL4-associated factor 8 [Sesamum ...    56   5e-06
ref|XP_012827795.1| PREDICTED: DDB1- and CUL4-associated factor ...    56   5e-06
ref|XP_022893107.1| DDB1- and CUL4-associated factor 8 [Olea eur...    56   7e-06

>gb|PIN01405.1| WD40 repeat protein [Handroanthus impetiginosus]
          Length = 476

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/52 (57%), Positives = 33/52 (63%)
 Frame = +3

Query: 6   KKLSKHEGSVHSPTVEPRSPYVFHSCGEDDIVQHRVLHWYSLKKEVAVGLNS 161
           KKLSKH+G VH   VEP SPYVF+SCGED  VQH     Y L+   A  L S
Sbjct: 135 KKLSKHQGRVHRLAVEPGSPYVFYSCGEDGFVQH-----YDLRSNSATKLFS 181


>ref|XP_011089371.1| DDB1- and CUL4-associated factor 8 [Sesamum indicum]
 ref|XP_020552513.1| DDB1- and CUL4-associated factor 8 [Sesamum indicum]
          Length = 477

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/44 (61%), Positives = 30/44 (68%)
 Frame = +3

Query: 6   KKLSKHEGSVHSPTVEPRSPYVFHSCGEDDIVQHRVLHWYSLKK 137
           K+LSKH+G VH   VEP SPYVF+SCGED  VQH  L   S  K
Sbjct: 135 KRLSKHQGRVHRLAVEPGSPYVFYSCGEDGFVQHYDLRSNSATK 178


>ref|XP_012827795.1| PREDICTED: DDB1- and CUL4-associated factor 8 [Erythranthe guttata]
 gb|EYU18885.1| hypothetical protein MIMGU_mgv1a005546mg [Erythranthe guttata]
          Length = 479

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/44 (61%), Positives = 30/44 (68%)
 Frame = +3

Query: 6   KKLSKHEGSVHSPTVEPRSPYVFHSCGEDDIVQHRVLHWYSLKK 137
           K+LSKH+G VH   VEP SPYVF+SCGED  VQH  L   S  K
Sbjct: 135 KRLSKHQGRVHRLAVEPGSPYVFYSCGEDGFVQHYDLRSNSATK 178


>ref|XP_022893107.1| DDB1- and CUL4-associated factor 8 [Olea europaea var. sylvestris]
          Length = 477

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 26/50 (52%), Positives = 34/50 (68%)
 Frame = +3

Query: 6   KKLSKHEGSVHSPTVEPRSPYVFHSCGEDDIVQHRVLHWYSLKKEVAVGL 155
           K+L+KH+G VH+  VEP SPY+F+SCGED  VQH     Y L+ + A  L
Sbjct: 135 KRLAKHQGRVHNLAVEPGSPYIFYSCGEDGFVQH-----YDLRSKSATKL 179


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