BLASTX nr result

ID: Rehmannia30_contig00022313 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00022313
         (548 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020554618.1| uncharacterized protein LOC110013155 [Sesamu...   101   2e-24
gb|PON84219.1| DEAD box RNA helicase family protein [Trema orien...    44   4e-07
gb|PON52487.1| ATP-dependent RNA helicase-like protein DB [Paras...    44   3e-06
gb|EXC20307.1| Shaggy-related protein kinase epsilon [Morus nota...    40   6e-06

>ref|XP_020554618.1| uncharacterized protein LOC110013155 [Sesamum indicum]
          Length = 119

 Score =  101 bits (251), Expect = 2e-24
 Identities = 49/64 (76%), Positives = 50/64 (78%)
 Frame = -2

Query: 373 CDICSRRSQMSYAVPPSCAGLHVFGAPLLVTNLCEGLSESSKLGRDFCW*RFSLPLCPDR 194
           CDICSRRSQMSYAVPPSC        P   TNLCEGLSESSKL RDFCW RFSLPL P+R
Sbjct: 21  CDICSRRSQMSYAVPPSCGACMYLERPNWWTNLCEGLSESSKLDRDFCWYRFSLPLGPNR 80

Query: 193 RRGV 182
           RRGV
Sbjct: 81  RRGV 84



 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 28/44 (63%), Positives = 33/44 (75%)
 Frame = -1

Query: 209 PLSG*KKRRPPTIACFSKQCLTSMEDDASSFLGHLLKSKRKQSE 78
           PL   ++R  PTIACF KQC+ S+ DDASSFLGHLLKSKR   +
Sbjct: 75  PLGPNRRRGVPTIACFGKQCMISLGDDASSFLGHLLKSKRNNQK 118


>gb|PON84219.1| DEAD box RNA helicase family protein [Trema orientalis]
          Length = 736

 Score = 43.5 bits (101), Expect(2) = 4e-07
 Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
 Frame = -2

Query: 442 TGGPTW*LRTHAQFFPSVLFCLR-CDICSRRSQMSYAVPPSC-AGLH-VFGAPLLVTNLC 272
           TG P+  LR  + F   +  C   CD+CS    MSYAV PS   GLH ++ A +  TN  
Sbjct: 171 TGFPSEMLREVSDFCFLLSVCYAMCDVCSWEELMSYAVLPSLWEGLHLIWSALIWWTNSF 230

Query: 271 EGLSESSKL 245
           EGLSES KL
Sbjct: 231 EGLSESPKL 239



 Score = 38.1 bits (87), Expect(2) = 4e-07
 Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = -3

Query: 267 GFPNHPSL-GGTSVGSDSVCPFVRIEEEASSYYCLLQQAV 151
           G    P L  GT+VG+DSVC  V+++EEASSY  L  QA+
Sbjct: 232 GLSESPKLVAGTAVGNDSVCHTVQMKEEASSYSSLHLQAL 271


>gb|PON52487.1| ATP-dependent RNA helicase-like protein DB [Parasponia andersonii]
          Length = 736

 Score = 43.9 bits (102), Expect(2) = 3e-06
 Identities = 33/69 (47%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
 Frame = -2

Query: 442 TGGPTW*LRTHAQFFPSVLFCLR-CDICSRRSQMSYAVPPSC-AGLH-VFGAPLLVTNLC 272
           TG P+  LR  + F   +  C   CD+CS    MSYAV PS   GLH V+ A +  TN  
Sbjct: 171 TGFPSEMLREVSDFCFLLSVCYAMCDVCSWEELMSYAVLPSLWEGLHLVWSALIWWTNSF 230

Query: 271 EGLSESSKL 245
           EGLSES KL
Sbjct: 231 EGLSESPKL 239



 Score = 34.7 bits (78), Expect(2) = 3e-06
 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = -3

Query: 267 GFPNHPSL-GGTSVGSDSVCPFVRIEEEASSYYCLLQQAV 151
           G    P L  GT+VG+ SVC  V+++EEASSY  L  QA+
Sbjct: 232 GLSESPKLVAGTAVGNYSVCHTVQMKEEASSYSSLHLQAL 271


>gb|EXC20307.1| Shaggy-related protein kinase epsilon [Morus notabilis]
          Length = 1931

 Score = 40.0 bits (92), Expect(2) = 6e-06
 Identities = 24/44 (54%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
 Frame = -2

Query: 373  CDICSRRSQMSYAVPPSCAG-LH-VFGAPLLVTNLCEGLSESSK 248
            CD+CS    MSYAV PS  G LH ++ A +  TN  EGLSES K
Sbjct: 1298 CDVCSLEELMSYAVLPSLPGALHFIWSALIRWTNSFEGLSESPK 1341



 Score = 37.4 bits (85), Expect(2) = 6e-06
 Identities = 22/48 (45%), Positives = 29/48 (60%)
 Frame = -3

Query: 249  SLGGTSVGSDSVCPFVRIEEEASSYYCLLQQAVPDFNGG*CFFFPWPL 106
            S+ GT+VG D VC  V+++EEASSY  L  QA+    G   F  P P+
Sbjct: 1342 SVAGTAVGDDLVCHSVQMKEEASSYSSLHSQALVQNAG---FSAPTPI 1386


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