BLASTX nr result

ID: Rehmannia30_contig00022155 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00022155
         (663 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020551664.1| pentatricopeptide repeat-containing protein ...    59   3e-06
gb|EYU37881.1| hypothetical protein MIMGU_mgv1a002592mg [Erythra...    57   6e-06
ref|XP_012837131.1| PREDICTED: pentatricopeptide repeat-containi...    57   6e-06

>ref|XP_020551664.1| pentatricopeptide repeat-containing protein MRL1, chloroplastic
            [Sesamum indicum]
 ref|XP_020551665.1| pentatricopeptide repeat-containing protein MRL1, chloroplastic
            [Sesamum indicum]
          Length = 1190

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 28/34 (82%), Positives = 29/34 (85%)
 Frame = +2

Query: 560  AMCLRRFQIARAFGEPVLSFTSGQVQLSSKWTSL 661
            AMCLRRFQ A   GEPVLSFT GQVQL+SKWTSL
Sbjct: 927  AMCLRRFQAACTLGEPVLSFTFGQVQLNSKWTSL 960


>gb|EYU37881.1| hypothetical protein MIMGU_mgv1a002592mg [Erythranthe guttata]
          Length = 656

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +2

Query: 563 MCLRRFQIARAFGEPVLSFTSGQVQLSSKWTSL 661
           MCLRRFQ A   GEPVLSF+SGQVQL+SKWTSL
Sbjct: 395 MCLRRFQAACTVGEPVLSFSSGQVQLNSKWTSL 427


>ref|XP_012837131.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
           chloroplastic [Erythranthe guttata]
          Length = 1102

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +2

Query: 563 MCLRRFQIARAFGEPVLSFTSGQVQLSSKWTSL 661
           MCLRRFQ A   GEPVLSF+SGQVQL+SKWTSL
Sbjct: 841 MCLRRFQAACTVGEPVLSFSSGQVQLNSKWTSL 873