BLASTX nr result
ID: Rehmannia30_contig00021541
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00021541
(612 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PIN14775.1| Spliceosomal protein snRNP-U1A/U2B [Handroanthus ... 170 2e-47
ref|XP_011088707.1| U11/U12 small nuclear ribonucleoprotein 65 k... 150 6e-40
ref|XP_022870119.1| U11/U12 small nuclear ribonucleoprotein 65 k... 149 3e-39
ref|XP_021904889.1| U11/U12 small nuclear ribonucleoprotein 65 k... 127 1e-31
gb|EOY10725.1| RNA-binding family protein isoform 6 [Theobroma c... 128 1e-31
gb|OMP06725.1| hypothetical protein CCACVL1_01454, partial [Corc... 125 2e-31
ref|XP_017977954.1| PREDICTED: U11/U12 small nuclear ribonucleop... 128 2e-31
ref|XP_007030220.2| PREDICTED: U11/U12 small nuclear ribonucleop... 128 2e-31
gb|EOY10720.1| RNA-binding family protein isoform 1 [Theobroma c... 128 2e-31
gb|EOY10723.1| RNA-binding family protein isoform 4 [Theobroma c... 128 2e-31
gb|KDO45535.1| hypothetical protein CISIN_1g043634mg, partial [C... 119 4e-31
emb|CDP20308.1| unnamed protein product [Coffea canephora] 127 5e-31
ref|XP_021282273.1| LOW QUALITY PROTEIN: U11/U12 small nuclear r... 127 6e-31
ref|XP_015943084.1| U11/U12 small nuclear ribonucleoprotein 65 k... 124 6e-30
ref|XP_016672939.1| PREDICTED: U11/U12 small nuclear ribonucleop... 125 6e-30
ref|XP_004493139.1| PREDICTED: U11/U12 small nuclear ribonucleop... 124 7e-30
gb|OMP05704.1| hypothetical protein COLO4_08630 [Corchorus olito... 124 1e-29
ref|XP_020979542.1| U11/U12 small nuclear ribonucleoprotein 65 k... 123 1e-29
ref|XP_016193087.1| U11/U12 small nuclear ribonucleoprotein 65 k... 123 2e-29
emb|CBI36673.3| unnamed protein product, partial [Vitis vinifera] 117 2e-29
>gb|PIN14775.1| Spliceosomal protein snRNP-U1A/U2B [Handroanthus impetiginosus]
Length = 456
Score = 170 bits (431), Expect = 2e-47
Identities = 80/101 (79%), Positives = 91/101 (90%)
Frame = +3
Query: 306 MAEAPPVPVPLQHFGHHRAVAEQSSVTLLVRHLPEAIPLDTITRLFYHYGASSVRPCSHG 485
MAEAPPV P+ + GHH+ VAE+S VTLLVRHLPEAIP DT+ RLF HYGA+ VRPCSHG
Sbjct: 1 MAEAPPVSQPISYLGHHQPVAEESPVTLLVRHLPEAIPHDTVARLFSHYGAAHVRPCSHG 60
Query: 486 RVRNCAYVDFKNEISASQAQKQLHGLQFLGKVLSIERASKV 608
RV+NCA++DFKNEISASQAQKQLHGL+FLGKVLS+ERASKV
Sbjct: 61 RVKNCAFIDFKNEISASQAQKQLHGLRFLGKVLSVERASKV 101
>ref|XP_011088707.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Sesamum
indicum]
Length = 441
Score = 150 bits (380), Expect = 6e-40
Identities = 73/86 (84%), Positives = 80/86 (93%)
Frame = +3
Query: 354 HRAVAEQSSVTLLVRHLPEAIPLDTITRLFYHYGASSVRPCSHGRVRNCAYVDFKNEISA 533
H VA +S+VTLLVRHLPEAIP DT+TRLF HYGASSVRPCSHGRV+NCA+VDFKNE SA
Sbjct: 3 HPGVAHESTVTLLVRHLPEAIPHDTLTRLFSHYGASSVRPCSHGRVKNCAFVDFKNETSA 62
Query: 534 SQAQKQLHGLQFLGKVLSIERASKVI 611
SQAQKQLHGL+FLGKVLS+ERASKVI
Sbjct: 63 SQAQKQLHGLRFLGKVLSVERASKVI 88
>ref|XP_022870119.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Olea
europaea var. sylvestris]
Length = 465
Score = 149 bits (376), Expect = 3e-39
Identities = 70/102 (68%), Positives = 84/102 (82%)
Frame = +3
Query: 306 MAEAPPVPVPLQHFGHHRAVAEQSSVTLLVRHLPEAIPLDTITRLFYHYGASSVRPCSHG 485
M EAPP P+ H G H V ++SS+TLLVRHLPEAIP DT++RLF HYGASSVR C++G
Sbjct: 1 MTEAPPSRKPVHHLGIHETVPQESSITLLVRHLPEAIPHDTLSRLFSHYGASSVRHCTYG 60
Query: 486 RVRNCAYVDFKNEISASQAQKQLHGLQFLGKVLSIERASKVI 611
R RNCA+VDFKNE ASQ QKQLHGL+FLGKVLS+ERA +++
Sbjct: 61 RARNCAFVDFKNEALASQVQKQLHGLKFLGKVLSVERARELV 102
>ref|XP_021904889.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Carica
papaya]
Length = 378
Score = 127 bits (320), Expect = 1e-31
Identities = 61/83 (73%), Positives = 73/83 (87%)
Frame = +3
Query: 357 RAVAEQSSVTLLVRHLPEAIPLDTITRLFYHYGASSVRPCSHGRVRNCAYVDFKNEISAS 536
R+ +SS +LLVRHLPEAIP DT++RLF HYGAS+VRPCS GR+RNCA+VDFKNE AS
Sbjct: 29 RSTESESSTSLLVRHLPEAIPHDTLSRLFSHYGASAVRPCSGGRLRNCAFVDFKNEALAS 88
Query: 537 QAQKQLHGLQFLGKVLSIERASK 605
QAQ+QL+GL+FLGKVLS+ RASK
Sbjct: 89 QAQRQLNGLRFLGKVLSVRRASK 111
>gb|EOY10725.1| RNA-binding family protein isoform 6 [Theobroma cacao]
Length = 436
Score = 128 bits (322), Expect = 1e-31
Identities = 64/97 (65%), Positives = 76/97 (78%), Gaps = 7/97 (7%)
Frame = +3
Query: 336 LQHFGHHRAVAEQSS-------VTLLVRHLPEAIPLDTITRLFYHYGASSVRPCSHGRVR 494
+QHFG+ S+ TLL+RHLPEAIP DT+ RLF HYGASSVRPCS G++R
Sbjct: 15 MQHFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLR 74
Query: 495 NCAYVDFKNEISASQAQKQLHGLQFLGKVLSIERASK 605
NCA+VDFKNE ASQAQ+QL+GL+FLGKVLS+ERASK
Sbjct: 75 NCAFVDFKNEALASQAQRQLNGLRFLGKVLSVERASK 111
>gb|OMP06725.1| hypothetical protein CCACVL1_01454, partial [Corchorus capsularis]
Length = 298
Score = 125 bits (314), Expect = 2e-31
Identities = 64/97 (65%), Positives = 76/97 (78%), Gaps = 7/97 (7%)
Frame = +3
Query: 336 LQHFGHHRAVAEQSS-------VTLLVRHLPEAIPLDTITRLFYHYGASSVRPCSHGRVR 494
+QHF + A S+ VTLLVRHLPEAIP DT++RLF HYGASSVRPCS G++R
Sbjct: 15 MQHFVYQGAEGATSNPQELDYAVTLLVRHLPEAIPHDTLSRLFSHYGASSVRPCSTGKLR 74
Query: 495 NCAYVDFKNEISASQAQKQLHGLQFLGKVLSIERASK 605
NCA+VDFKNE ASQA +QL+GL+FLGKVLS+ERA K
Sbjct: 75 NCAFVDFKNEALASQAHRQLNGLRFLGKVLSVERAGK 111
>ref|XP_017977954.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
isoform X2 [Theobroma cacao]
Length = 465
Score = 128 bits (322), Expect = 2e-31
Identities = 64/97 (65%), Positives = 76/97 (78%), Gaps = 7/97 (7%)
Frame = +3
Query: 336 LQHFGHHRAVAEQSS-------VTLLVRHLPEAIPLDTITRLFYHYGASSVRPCSHGRVR 494
+QHFG+ S+ TLL+RHLPEAIP DT+ RLF HYGASSVRPCS G++R
Sbjct: 1 MQHFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLR 60
Query: 495 NCAYVDFKNEISASQAQKQLHGLQFLGKVLSIERASK 605
NCA+VDFKNE ASQAQ+QL+GL+FLGKVLS+ERASK
Sbjct: 61 NCAFVDFKNEALASQAQRQLNGLRFLGKVLSVERASK 97
>ref|XP_007030220.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
isoform X1 [Theobroma cacao]
Length = 479
Score = 128 bits (322), Expect = 2e-31
Identities = 64/97 (65%), Positives = 76/97 (78%), Gaps = 7/97 (7%)
Frame = +3
Query: 336 LQHFGHHRAVAEQSS-------VTLLVRHLPEAIPLDTITRLFYHYGASSVRPCSHGRVR 494
+QHFG+ S+ TLL+RHLPEAIP DT+ RLF HYGASSVRPCS G++R
Sbjct: 15 MQHFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLR 74
Query: 495 NCAYVDFKNEISASQAQKQLHGLQFLGKVLSIERASK 605
NCA+VDFKNE ASQAQ+QL+GL+FLGKVLS+ERASK
Sbjct: 75 NCAFVDFKNEALASQAQRQLNGLRFLGKVLSVERASK 111
>gb|EOY10720.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gb|EOY10721.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gb|EOY10722.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 479
Score = 128 bits (322), Expect = 2e-31
Identities = 64/97 (65%), Positives = 76/97 (78%), Gaps = 7/97 (7%)
Frame = +3
Query: 336 LQHFGHHRAVAEQSS-------VTLLVRHLPEAIPLDTITRLFYHYGASSVRPCSHGRVR 494
+QHFG+ S+ TLL+RHLPEAIP DT+ RLF HYGASSVRPCS G++R
Sbjct: 15 MQHFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLR 74
Query: 495 NCAYVDFKNEISASQAQKQLHGLQFLGKVLSIERASK 605
NCA+VDFKNE ASQAQ+QL+GL+FLGKVLS+ERASK
Sbjct: 75 NCAFVDFKNEALASQAQRQLNGLRFLGKVLSVERASK 111
>gb|EOY10723.1| RNA-binding family protein isoform 4 [Theobroma cacao]
Length = 487
Score = 128 bits (322), Expect = 2e-31
Identities = 64/97 (65%), Positives = 76/97 (78%), Gaps = 7/97 (7%)
Frame = +3
Query: 336 LQHFGHHRAVAEQSS-------VTLLVRHLPEAIPLDTITRLFYHYGASSVRPCSHGRVR 494
+QHFG+ S+ TLL+RHLPEAIP DT+ RLF HYGASSVRPCS G++R
Sbjct: 15 MQHFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLR 74
Query: 495 NCAYVDFKNEISASQAQKQLHGLQFLGKVLSIERASK 605
NCA+VDFKNE ASQAQ+QL+GL+FLGKVLS+ERASK
Sbjct: 75 NCAFVDFKNEALASQAQRQLNGLRFLGKVLSVERASK 111
>gb|KDO45535.1| hypothetical protein CISIN_1g043634mg, partial [Citrus sinensis]
Length = 121
Score = 119 bits (298), Expect = 4e-31
Identities = 56/78 (71%), Positives = 69/78 (88%)
Frame = +3
Query: 372 QSSVTLLVRHLPEAIPLDTITRLFYHYGASSVRPCSHGRVRNCAYVDFKNEISASQAQKQ 551
++ VTLL++HLP+AIP DT++R+F HYGASSVRPCS GR+RNC +VDF NE ASQAQ Q
Sbjct: 17 ENLVTLLIKHLPDAIPQDTLSRIFSHYGASSVRPCSAGRLRNCVFVDFGNEPLASQAQMQ 76
Query: 552 LHGLQFLGKVLSIERASK 605
L+GL+FLGKVLS+ERASK
Sbjct: 77 LNGLRFLGKVLSVERASK 94
>emb|CDP20308.1| unnamed protein product [Coffea canephora]
Length = 468
Score = 127 bits (319), Expect = 5e-31
Identities = 66/103 (64%), Positives = 78/103 (75%)
Frame = +3
Query: 297 PSIMAEAPPVPVPLQHFGHHRAVAEQSSVTLLVRHLPEAIPLDTITRLFYHYGASSVRPC 476
PS+ P Q+ G+H E + TLLVRHLPEAIP +T++RLF HYGASSVRPC
Sbjct: 11 PSVPPAIQPQLQTAQNLGYHLQSNEHEA-TLLVRHLPEAIPQETLSRLFSHYGASSVRPC 69
Query: 477 SHGRVRNCAYVDFKNEISASQAQKQLHGLQFLGKVLSIERASK 605
SHGRVRN A+VDFK+E ASQAQKQL+GL+FLGKVL +ERA K
Sbjct: 70 SHGRVRNSAFVDFKSEALASQAQKQLNGLRFLGKVLLVERACK 112
>ref|XP_021282273.1| LOW QUALITY PROTEIN: U11/U12 small nuclear ribonucleoprotein 65 kDa
protein [Herrania umbratica]
Length = 481
Score = 127 bits (319), Expect = 6e-31
Identities = 63/97 (64%), Positives = 76/97 (78%), Gaps = 7/97 (7%)
Frame = +3
Query: 336 LQHFGHHRAVAEQSS-------VTLLVRHLPEAIPLDTITRLFYHYGASSVRPCSHGRVR 494
+QHFG+ SS TLL+RHLPEAIP DT+ +LF HYGASSVRPCS G++R
Sbjct: 15 MQHFGYQGVEGTTSSPQELESVTTLLIRHLPEAIPRDTLLQLFSHYGASSVRPCSSGKLR 74
Query: 495 NCAYVDFKNEISASQAQKQLHGLQFLGKVLSIERASK 605
NCA+VDFKNE ASQAQ+QL+GL+FLGKVLS+ERA+K
Sbjct: 75 NCAFVDFKNEALASQAQRQLNGLRFLGKVLSVERANK 111
>ref|XP_015943084.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Arachis
duranensis]
Length = 446
Score = 124 bits (311), Expect = 6e-30
Identities = 60/89 (67%), Positives = 72/89 (80%)
Frame = +3
Query: 336 LQHFGHHRAVAEQSSVTLLVRHLPEAIPLDTITRLFYHYGASSVRPCSHGRVRNCAYVDF 515
+ H + A S VTLL++HLPEAIP DT++RL HYGASS+RPCS GR+RNCA+VDF
Sbjct: 1 MYHSADSKPPAMDSPVTLLIKHLPEAIPHDTLSRLLSHYGASSLRPCSTGRLRNCAFVDF 60
Query: 516 KNEISASQAQKQLHGLQFLGKVLSIERAS 602
KNEI ASQAQ+QLHGL+ LGKVLS ERA+
Sbjct: 61 KNEILASQAQRQLHGLRLLGKVLSAERAN 89
>ref|XP_016672939.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa
protein-like isoform X1 [Gossypium hirsutum]
Length = 521
Score = 125 bits (313), Expect = 6e-30
Identities = 67/129 (51%), Positives = 85/129 (65%), Gaps = 7/129 (5%)
Frame = +3
Query: 240 NTCQEKGFLFPFRICPVQQPSIMAEAPPVPVPLQHFGHH-------RAVAEQSSVTLLVR 398
N+ QE+ + R C +I + P +Q FG+ + S TLL+R
Sbjct: 28 NSIQERNEI---RYCDALMAAIPSSQPFSSPQIQQFGYQGVEGATSNPLGADSVATLLIR 84
Query: 399 HLPEAIPLDTITRLFYHYGASSVRPCSHGRVRNCAYVDFKNEISASQAQKQLHGLQFLGK 578
HLPEAIP +T+ RLF HYGASSVRPCS G++RNCA+VDFKNE ASQA +QL+GL+FLGK
Sbjct: 85 HLPEAIPPETLLRLFSHYGASSVRPCSSGKLRNCAFVDFKNEALASQAHRQLNGLRFLGK 144
Query: 579 VLSIERASK 605
VL +ERASK
Sbjct: 145 VLLVERASK 153
>ref|XP_004493139.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
[Cicer arietinum]
Length = 459
Score = 124 bits (311), Expect = 7e-30
Identities = 63/102 (61%), Positives = 77/102 (75%)
Frame = +3
Query: 306 MAEAPPVPVPLQHFGHHRAVAEQSSVTLLVRHLPEAIPLDTITRLFYHYGASSVRPCSHG 485
MA P + Q A +SS TLL++HLP+AIP DT++RL HYGASSVRPCS G
Sbjct: 1 MASNPSLQFGFQGNIDPNPCAGESSATLLIKHLPDAIPHDTLSRLLSHYGASSVRPCSRG 60
Query: 486 RVRNCAYVDFKNEISASQAQKQLHGLQFLGKVLSIERASKVI 611
R+RNCA+VDFKN++ ASQA +QL+GL+FLGKVLS ERASK I
Sbjct: 61 RLRNCAFVDFKNDMLASQAHRQLNGLKFLGKVLSAERASKPI 102
>gb|OMP05704.1| hypothetical protein COLO4_08630 [Corchorus olitorius]
Length = 483
Score = 124 bits (310), Expect = 1e-29
Identities = 59/76 (77%), Positives = 69/76 (90%)
Frame = +3
Query: 381 VTLLVRHLPEAIPLDTITRLFYHYGASSVRPCSHGRVRNCAYVDFKNEISASQAQKQLHG 560
VTLLVRHLPEAIP DT++RLF HYGASSVRPCS G++RNCA+VDFKNE ASQA +QL+G
Sbjct: 37 VTLLVRHLPEAIPHDTLSRLFSHYGASSVRPCSTGKLRNCAFVDFKNEALASQAHRQLNG 96
Query: 561 LQFLGKVLSIERASKV 608
L+FLGKVLS+ERA K+
Sbjct: 97 LRFLGKVLSVERAGKL 112
>ref|XP_020979542.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X2
[Arachis ipaensis]
Length = 433
Score = 123 bits (308), Expect = 1e-29
Identities = 59/89 (66%), Positives = 72/89 (80%)
Frame = +3
Query: 336 LQHFGHHRAVAEQSSVTLLVRHLPEAIPLDTITRLFYHYGASSVRPCSHGRVRNCAYVDF 515
+ H + A S VTLL++HLPEAIP DT++RL HYGASS+RPCS GR+RNCA+VDF
Sbjct: 1 MYHSADSKPPAMDSPVTLLIKHLPEAIPHDTLSRLLSHYGASSLRPCSTGRLRNCAFVDF 60
Query: 516 KNEISASQAQKQLHGLQFLGKVLSIERAS 602
KNE+ ASQAQ+QLHGL+ LGKVLS ERA+
Sbjct: 61 KNEMLASQAQRQLHGLRLLGKVLSAERAN 89
>ref|XP_016193087.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1
[Arachis ipaensis]
ref|XP_016193098.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1
[Arachis ipaensis]
ref|XP_020979536.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1
[Arachis ipaensis]
ref|XP_020979540.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1
[Arachis ipaensis]
Length = 446
Score = 123 bits (308), Expect = 2e-29
Identities = 59/89 (66%), Positives = 72/89 (80%)
Frame = +3
Query: 336 LQHFGHHRAVAEQSSVTLLVRHLPEAIPLDTITRLFYHYGASSVRPCSHGRVRNCAYVDF 515
+ H + A S VTLL++HLPEAIP DT++RL HYGASS+RPCS GR+RNCA+VDF
Sbjct: 1 MYHSADSKPPAMDSPVTLLIKHLPEAIPHDTLSRLLSHYGASSLRPCSTGRLRNCAFVDF 60
Query: 516 KNEISASQAQKQLHGLQFLGKVLSIERAS 602
KNE+ ASQAQ+QLHGL+ LGKVLS ERA+
Sbjct: 61 KNEMLASQAQRQLHGLRLLGKVLSAERAN 89
>emb|CBI36673.3| unnamed protein product, partial [Vitis vinifera]
Length = 190
Score = 117 bits (292), Expect = 2e-29
Identities = 56/80 (70%), Positives = 71/80 (88%)
Frame = +3
Query: 366 AEQSSVTLLVRHLPEAIPLDTITRLFYHYGASSVRPCSHGRVRNCAYVDFKNEISASQAQ 545
AE+S+ TLL+RHLPEAIP DT++RLF YGASSVRP + GR+RNCA+VDFK+E+ ASQA
Sbjct: 16 AEKSAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPSTSGRLRNCAFVDFKSEMLASQAL 75
Query: 546 KQLHGLQFLGKVLSIERASK 605
+QL+GL+FLGKVL +ERA+K
Sbjct: 76 RQLNGLRFLGKVLLVERANK 95