BLASTX nr result
ID: Rehmannia30_contig00021540
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00021540
(573 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PIN14775.1| Spliceosomal protein snRNP-U1A/U2B [Handroanthus ... 174 5e-49
ref|XP_011088707.1| U11/U12 small nuclear ribonucleoprotein 65 k... 154 1e-41
ref|XP_022870119.1| U11/U12 small nuclear ribonucleoprotein 65 k... 153 7e-41
ref|XP_021904889.1| U11/U12 small nuclear ribonucleoprotein 65 k... 131 2e-33
gb|EOY10725.1| RNA-binding family protein isoform 6 [Theobroma c... 132 3e-33
ref|XP_017977954.1| PREDICTED: U11/U12 small nuclear ribonucleop... 132 5e-33
ref|XP_007030220.2| PREDICTED: U11/U12 small nuclear ribonucleop... 132 6e-33
gb|EOY10720.1| RNA-binding family protein isoform 1 [Theobroma c... 132 6e-33
gb|EOY10723.1| RNA-binding family protein isoform 4 [Theobroma c... 132 6e-33
gb|KDO45535.1| hypothetical protein CISIN_1g043634mg, partial [C... 123 8e-33
gb|OMP06725.1| hypothetical protein CCACVL1_01454, partial [Corc... 128 1e-32
emb|CDP20308.1| unnamed protein product [Coffea canephora] 131 1e-32
ref|XP_021282273.1| LOW QUALITY PROTEIN: U11/U12 small nuclear r... 130 4e-32
ref|XP_004493139.1| PREDICTED: U11/U12 small nuclear ribonucleop... 128 2e-31
ref|XP_015943084.1| U11/U12 small nuclear ribonucleoprotein 65 k... 127 2e-31
ref|XP_020979542.1| U11/U12 small nuclear ribonucleoprotein 65 k... 126 4e-31
ref|XP_016193087.1| U11/U12 small nuclear ribonucleoprotein 65 k... 126 5e-31
ref|XP_016672939.1| PREDICTED: U11/U12 small nuclear ribonucleop... 127 6e-31
gb|OMP05704.1| hypothetical protein COLO4_08630 [Corchorus olito... 126 8e-31
ref|XP_023756819.1| U11/U12 small nuclear ribonucleoprotein 65 k... 126 8e-31
>gb|PIN14775.1| Spliceosomal protein snRNP-U1A/U2B [Handroanthus impetiginosus]
Length = 456
Score = 174 bits (441), Expect = 5e-49
Identities = 83/101 (82%), Positives = 92/101 (91%)
Frame = +3
Query: 267 MAEAPPVPVPLQHFGHHRAVAEESSVTLLVRHLPEAIPLDTITRLFSHYGASSVRPCSHG 446
MAEAPPV P+ + GHH+ VAEES VTLLVRHLPEAIP DT+ RLFSHYGA+ VRPCSHG
Sbjct: 1 MAEAPPVSQPISYLGHHQPVAEESPVTLLVRHLPEAIPHDTVARLFSHYGAAHVRPCSHG 60
Query: 447 RVRNCAYVDFKNEISASQAQKQLHGLQFLGKVLSVERASKV 569
RV+NCA++DFKNEISASQAQKQLHGL+FLGKVLSVERASKV
Sbjct: 61 RVKNCAFIDFKNEISASQAQKQLHGLRFLGKVLSVERASKV 101
>ref|XP_011088707.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Sesamum
indicum]
Length = 441
Score = 154 bits (390), Expect = 1e-41
Identities = 76/86 (88%), Positives = 81/86 (94%)
Frame = +3
Query: 315 HRAVAEESSVTLLVRHLPEAIPLDTITRLFSHYGASSVRPCSHGRVRNCAYVDFKNEISA 494
H VA ES+VTLLVRHLPEAIP DT+TRLFSHYGASSVRPCSHGRV+NCA+VDFKNE SA
Sbjct: 3 HPGVAHESTVTLLVRHLPEAIPHDTLTRLFSHYGASSVRPCSHGRVKNCAFVDFKNETSA 62
Query: 495 SQAQKQLHGLQFLGKVLSVERASKVI 572
SQAQKQLHGL+FLGKVLSVERASKVI
Sbjct: 63 SQAQKQLHGLRFLGKVLSVERASKVI 88
>ref|XP_022870119.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Olea
europaea var. sylvestris]
Length = 465
Score = 153 bits (386), Expect = 7e-41
Identities = 73/102 (71%), Positives = 85/102 (83%)
Frame = +3
Query: 267 MAEAPPVPVPLQHFGHHRAVAEESSVTLLVRHLPEAIPLDTITRLFSHYGASSVRPCSHG 446
M EAPP P+ H G H V +ESS+TLLVRHLPEAIP DT++RLFSHYGASSVR C++G
Sbjct: 1 MTEAPPSRKPVHHLGIHETVPQESSITLLVRHLPEAIPHDTLSRLFSHYGASSVRHCTYG 60
Query: 447 RVRNCAYVDFKNEISASQAQKQLHGLQFLGKVLSVERASKVI 572
R RNCA+VDFKNE ASQ QKQLHGL+FLGKVLSVERA +++
Sbjct: 61 RARNCAFVDFKNEALASQVQKQLHGLKFLGKVLSVERARELV 102
>ref|XP_021904889.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Carica
papaya]
Length = 378
Score = 131 bits (330), Expect = 2e-33
Identities = 64/83 (77%), Positives = 74/83 (89%)
Frame = +3
Query: 318 RAVAEESSVTLLVRHLPEAIPLDTITRLFSHYGASSVRPCSHGRVRNCAYVDFKNEISAS 497
R+ ESS +LLVRHLPEAIP DT++RLFSHYGAS+VRPCS GR+RNCA+VDFKNE AS
Sbjct: 29 RSTESESSTSLLVRHLPEAIPHDTLSRLFSHYGASAVRPCSGGRLRNCAFVDFKNEALAS 88
Query: 498 QAQKQLHGLQFLGKVLSVERASK 566
QAQ+QL+GL+FLGKVLSV RASK
Sbjct: 89 QAQRQLNGLRFLGKVLSVRRASK 111
>gb|EOY10725.1| RNA-binding family protein isoform 6 [Theobroma cacao]
Length = 436
Score = 132 bits (332), Expect = 3e-33
Identities = 67/97 (69%), Positives = 77/97 (79%), Gaps = 7/97 (7%)
Frame = +3
Query: 297 LQHFGHHRAVAE-------ESSVTLLVRHLPEAIPLDTITRLFSHYGASSVRPCSHGRVR 455
+QHFG+ ES TLL+RHLPEAIP DT+ RLFSHYGASSVRPCS G++R
Sbjct: 15 MQHFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLR 74
Query: 456 NCAYVDFKNEISASQAQKQLHGLQFLGKVLSVERASK 566
NCA+VDFKNE ASQAQ+QL+GL+FLGKVLSVERASK
Sbjct: 75 NCAFVDFKNEALASQAQRQLNGLRFLGKVLSVERASK 111
>ref|XP_017977954.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
isoform X2 [Theobroma cacao]
Length = 465
Score = 132 bits (332), Expect = 5e-33
Identities = 67/97 (69%), Positives = 77/97 (79%), Gaps = 7/97 (7%)
Frame = +3
Query: 297 LQHFGHHRAVAE-------ESSVTLLVRHLPEAIPLDTITRLFSHYGASSVRPCSHGRVR 455
+QHFG+ ES TLL+RHLPEAIP DT+ RLFSHYGASSVRPCS G++R
Sbjct: 1 MQHFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLR 60
Query: 456 NCAYVDFKNEISASQAQKQLHGLQFLGKVLSVERASK 566
NCA+VDFKNE ASQAQ+QL+GL+FLGKVLSVERASK
Sbjct: 61 NCAFVDFKNEALASQAQRQLNGLRFLGKVLSVERASK 97
>ref|XP_007030220.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
isoform X1 [Theobroma cacao]
Length = 479
Score = 132 bits (332), Expect = 6e-33
Identities = 67/97 (69%), Positives = 77/97 (79%), Gaps = 7/97 (7%)
Frame = +3
Query: 297 LQHFGHHRAVAE-------ESSVTLLVRHLPEAIPLDTITRLFSHYGASSVRPCSHGRVR 455
+QHFG+ ES TLL+RHLPEAIP DT+ RLFSHYGASSVRPCS G++R
Sbjct: 15 MQHFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLR 74
Query: 456 NCAYVDFKNEISASQAQKQLHGLQFLGKVLSVERASK 566
NCA+VDFKNE ASQAQ+QL+GL+FLGKVLSVERASK
Sbjct: 75 NCAFVDFKNEALASQAQRQLNGLRFLGKVLSVERASK 111
>gb|EOY10720.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gb|EOY10721.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gb|EOY10722.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 479
Score = 132 bits (332), Expect = 6e-33
Identities = 67/97 (69%), Positives = 77/97 (79%), Gaps = 7/97 (7%)
Frame = +3
Query: 297 LQHFGHHRAVAE-------ESSVTLLVRHLPEAIPLDTITRLFSHYGASSVRPCSHGRVR 455
+QHFG+ ES TLL+RHLPEAIP DT+ RLFSHYGASSVRPCS G++R
Sbjct: 15 MQHFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLR 74
Query: 456 NCAYVDFKNEISASQAQKQLHGLQFLGKVLSVERASK 566
NCA+VDFKNE ASQAQ+QL+GL+FLGKVLSVERASK
Sbjct: 75 NCAFVDFKNEALASQAQRQLNGLRFLGKVLSVERASK 111
>gb|EOY10723.1| RNA-binding family protein isoform 4 [Theobroma cacao]
Length = 487
Score = 132 bits (332), Expect = 6e-33
Identities = 67/97 (69%), Positives = 77/97 (79%), Gaps = 7/97 (7%)
Frame = +3
Query: 297 LQHFGHHRAVAE-------ESSVTLLVRHLPEAIPLDTITRLFSHYGASSVRPCSHGRVR 455
+QHFG+ ES TLL+RHLPEAIP DT+ RLFSHYGASSVRPCS G++R
Sbjct: 15 MQHFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLR 74
Query: 456 NCAYVDFKNEISASQAQKQLHGLQFLGKVLSVERASK 566
NCA+VDFKNE ASQAQ+QL+GL+FLGKVLSVERASK
Sbjct: 75 NCAFVDFKNEALASQAQRQLNGLRFLGKVLSVERASK 111
>gb|KDO45535.1| hypothetical protein CISIN_1g043634mg, partial [Citrus sinensis]
Length = 121
Score = 123 bits (308), Expect = 8e-33
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 333 ESSVTLLVRHLPEAIPLDTITRLFSHYGASSVRPCSHGRVRNCAYVDFKNEISASQAQKQ 512
E+ VTLL++HLP+AIP DT++R+FSHYGASSVRPCS GR+RNC +VDF NE ASQAQ Q
Sbjct: 17 ENLVTLLIKHLPDAIPQDTLSRIFSHYGASSVRPCSAGRLRNCVFVDFGNEPLASQAQMQ 76
Query: 513 LHGLQFLGKVLSVERASK 566
L+GL+FLGKVLSVERASK
Sbjct: 77 LNGLRFLGKVLSVERASK 94
>gb|OMP06725.1| hypothetical protein CCACVL1_01454, partial [Corchorus capsularis]
Length = 298
Score = 128 bits (321), Expect = 1e-32
Identities = 66/97 (68%), Positives = 77/97 (79%), Gaps = 7/97 (7%)
Frame = +3
Query: 297 LQHFGHHRAVAEESS-------VTLLVRHLPEAIPLDTITRLFSHYGASSVRPCSHGRVR 455
+QHF + A S+ VTLLVRHLPEAIP DT++RLFSHYGASSVRPCS G++R
Sbjct: 15 MQHFVYQGAEGATSNPQELDYAVTLLVRHLPEAIPHDTLSRLFSHYGASSVRPCSTGKLR 74
Query: 456 NCAYVDFKNEISASQAQKQLHGLQFLGKVLSVERASK 566
NCA+VDFKNE ASQA +QL+GL+FLGKVLSVERA K
Sbjct: 75 NCAFVDFKNEALASQAHRQLNGLRFLGKVLSVERAGK 111
>emb|CDP20308.1| unnamed protein product [Coffea canephora]
Length = 468
Score = 131 bits (329), Expect = 1e-32
Identities = 68/103 (66%), Positives = 79/103 (76%)
Frame = +3
Query: 258 PSIMAEAPPVPVPLQHFGHHRAVAEESSVTLLVRHLPEAIPLDTITRLFSHYGASSVRPC 437
PS+ P Q+ G+H + E TLLVRHLPEAIP +T++RLFSHYGASSVRPC
Sbjct: 11 PSVPPAIQPQLQTAQNLGYHLQ-SNEHEATLLVRHLPEAIPQETLSRLFSHYGASSVRPC 69
Query: 438 SHGRVRNCAYVDFKNEISASQAQKQLHGLQFLGKVLSVERASK 566
SHGRVRN A+VDFK+E ASQAQKQL+GL+FLGKVL VERA K
Sbjct: 70 SHGRVRNSAFVDFKSEALASQAQKQLNGLRFLGKVLLVERACK 112
>ref|XP_021282273.1| LOW QUALITY PROTEIN: U11/U12 small nuclear ribonucleoprotein 65 kDa
protein [Herrania umbratica]
Length = 481
Score = 130 bits (326), Expect = 4e-32
Identities = 65/97 (67%), Positives = 77/97 (79%), Gaps = 7/97 (7%)
Frame = +3
Query: 297 LQHFGHHRAVAEESS-------VTLLVRHLPEAIPLDTITRLFSHYGASSVRPCSHGRVR 455
+QHFG+ SS TLL+RHLPEAIP DT+ +LFSHYGASSVRPCS G++R
Sbjct: 15 MQHFGYQGVEGTTSSPQELESVTTLLIRHLPEAIPRDTLLQLFSHYGASSVRPCSSGKLR 74
Query: 456 NCAYVDFKNEISASQAQKQLHGLQFLGKVLSVERASK 566
NCA+VDFKNE ASQAQ+QL+GL+FLGKVLSVERA+K
Sbjct: 75 NCAFVDFKNEALASQAQRQLNGLRFLGKVLSVERANK 111
>ref|XP_004493139.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
[Cicer arietinum]
Length = 459
Score = 128 bits (321), Expect = 2e-31
Identities = 65/102 (63%), Positives = 78/102 (76%)
Frame = +3
Query: 267 MAEAPPVPVPLQHFGHHRAVAEESSVTLLVRHLPEAIPLDTITRLFSHYGASSVRPCSHG 446
MA P + Q A ESS TLL++HLP+AIP DT++RL SHYGASSVRPCS G
Sbjct: 1 MASNPSLQFGFQGNIDPNPCAGESSATLLIKHLPDAIPHDTLSRLLSHYGASSVRPCSRG 60
Query: 447 RVRNCAYVDFKNEISASQAQKQLHGLQFLGKVLSVERASKVI 572
R+RNCA+VDFKN++ ASQA +QL+GL+FLGKVLS ERASK I
Sbjct: 61 RLRNCAFVDFKNDMLASQAHRQLNGLKFLGKVLSAERASKPI 102
>ref|XP_015943084.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Arachis
duranensis]
Length = 446
Score = 127 bits (320), Expect = 2e-31
Identities = 61/89 (68%), Positives = 74/89 (83%)
Frame = +3
Query: 297 LQHFGHHRAVAEESSVTLLVRHLPEAIPLDTITRLFSHYGASSVRPCSHGRVRNCAYVDF 476
+ H + A +S VTLL++HLPEAIP DT++RL SHYGASS+RPCS GR+RNCA+VDF
Sbjct: 1 MYHSADSKPPAMDSPVTLLIKHLPEAIPHDTLSRLLSHYGASSLRPCSTGRLRNCAFVDF 60
Query: 477 KNEISASQAQKQLHGLQFLGKVLSVERAS 563
KNEI ASQAQ+QLHGL+ LGKVLS ERA+
Sbjct: 61 KNEILASQAQRQLHGLRLLGKVLSAERAN 89
>ref|XP_020979542.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X2
[Arachis ipaensis]
Length = 433
Score = 126 bits (317), Expect = 4e-31
Identities = 60/89 (67%), Positives = 74/89 (83%)
Frame = +3
Query: 297 LQHFGHHRAVAEESSVTLLVRHLPEAIPLDTITRLFSHYGASSVRPCSHGRVRNCAYVDF 476
+ H + A +S VTLL++HLPEAIP DT++RL SHYGASS+RPCS GR+RNCA+VDF
Sbjct: 1 MYHSADSKPPAMDSPVTLLIKHLPEAIPHDTLSRLLSHYGASSLRPCSTGRLRNCAFVDF 60
Query: 477 KNEISASQAQKQLHGLQFLGKVLSVERAS 563
KNE+ ASQAQ+QLHGL+ LGKVLS ERA+
Sbjct: 61 KNEMLASQAQRQLHGLRLLGKVLSAERAN 89
>ref|XP_016193087.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1
[Arachis ipaensis]
ref|XP_016193098.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1
[Arachis ipaensis]
ref|XP_020979536.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1
[Arachis ipaensis]
ref|XP_020979540.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1
[Arachis ipaensis]
Length = 446
Score = 126 bits (317), Expect = 5e-31
Identities = 60/89 (67%), Positives = 74/89 (83%)
Frame = +3
Query: 297 LQHFGHHRAVAEESSVTLLVRHLPEAIPLDTITRLFSHYGASSVRPCSHGRVRNCAYVDF 476
+ H + A +S VTLL++HLPEAIP DT++RL SHYGASS+RPCS GR+RNCA+VDF
Sbjct: 1 MYHSADSKPPAMDSPVTLLIKHLPEAIPHDTLSRLLSHYGASSLRPCSTGRLRNCAFVDF 60
Query: 477 KNEISASQAQKQLHGLQFLGKVLSVERAS 563
KNE+ ASQAQ+QLHGL+ LGKVLS ERA+
Sbjct: 61 KNEMLASQAQRQLHGLRLLGKVLSAERAN 89
>ref|XP_016672939.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa
protein-like isoform X1 [Gossypium hirsutum]
Length = 521
Score = 127 bits (319), Expect = 6e-31
Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 7/117 (5%)
Frame = +3
Query: 237 RICPVQQPSIMAEAPPVPVPLQHFGHH-------RAVAEESSVTLLVRHLPEAIPLDTIT 395
R C +I + P +Q FG+ + +S TLL+RHLPEAIP +T+
Sbjct: 37 RYCDALMAAIPSSQPFSSPQIQQFGYQGVEGATSNPLGADSVATLLIRHLPEAIPPETLL 96
Query: 396 RLFSHYGASSVRPCSHGRVRNCAYVDFKNEISASQAQKQLHGLQFLGKVLSVERASK 566
RLFSHYGASSVRPCS G++RNCA+VDFKNE ASQA +QL+GL+FLGKVL VERASK
Sbjct: 97 RLFSHYGASSVRPCSSGKLRNCAFVDFKNEALASQAHRQLNGLRFLGKVLLVERASK 153
>gb|OMP05704.1| hypothetical protein COLO4_08630 [Corchorus olitorius]
Length = 483
Score = 126 bits (317), Expect = 8e-31
Identities = 61/76 (80%), Positives = 70/76 (92%)
Frame = +3
Query: 342 VTLLVRHLPEAIPLDTITRLFSHYGASSVRPCSHGRVRNCAYVDFKNEISASQAQKQLHG 521
VTLLVRHLPEAIP DT++RLFSHYGASSVRPCS G++RNCA+VDFKNE ASQA +QL+G
Sbjct: 37 VTLLVRHLPEAIPHDTLSRLFSHYGASSVRPCSTGKLRNCAFVDFKNEALASQAHRQLNG 96
Query: 522 LQFLGKVLSVERASKV 569
L+FLGKVLSVERA K+
Sbjct: 97 LRFLGKVLSVERAGKL 112
>ref|XP_023756819.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Lactuca
sativa]
gb|PLY90647.1| hypothetical protein LSAT_6X37921 [Lactuca sativa]
Length = 456
Score = 126 bits (316), Expect = 8e-31
Identities = 60/78 (76%), Positives = 72/78 (92%)
Frame = +3
Query: 330 EESSVTLLVRHLPEAIPLDTITRLFSHYGASSVRPCSHGRVRNCAYVDFKNEISASQAQK 509
+E+S TLL+RHLPEAIP DT+TRLFSHYGASSVRPC+ GR+RNCA+VDF NE A+QAQ+
Sbjct: 35 KETSTTLLIRHLPEAIPHDTLTRLFSHYGASSVRPCTTGRMRNCAFVDFNNEGLATQAQR 94
Query: 510 QLHGLQFLGKVLSVERAS 563
QL+GL+FLGKVLSVERA+
Sbjct: 95 QLNGLRFLGKVLSVERAT 112