BLASTX nr result
ID: Rehmannia30_contig00020847
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00020847
(446 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KHG12104.1| DNA-directed RNA polymerase subunit beta'' [Gossy... 80 2e-16
gb|AFS35535.1| RNA polymerase beta subunit, partial (plastid) [F... 80 4e-16
emb|CAP11904.1| RNA polymerase beta subunit, partial (chloroplas... 80 4e-16
emb|CAP11916.1| RNA polymerase beta subunit, partial (chloroplas... 80 5e-16
emb|CAP11909.1| RNA polymerase beta subunit, partial (chloroplas... 80 6e-16
emb|CAP11908.1| RNA polymerase beta subunit, partial (chloroplas... 80 6e-16
emb|CAP11906.1| RNA polymerase beta subunit, partial (chloroplas... 79 1e-15
emb|CAP11921.1| RNA polymerase beta subunit, partial (chloroplas... 80 2e-15
emb|CAP11920.1| RNA polymerase beta subunit, partial (chloroplas... 80 2e-15
gb|AGF30344.1| RNA polymerase beta'', partial (chloroplast) [Lam... 80 2e-15
gb|AGF30336.1| RNA polymerase beta'', partial (chloroplast) [Lam... 80 2e-15
gb|AGF30327.1| RNA polymerase beta'', partial (chloroplast) [Lam... 80 2e-15
gb|AGF30322.1| RNA polymerase beta'', partial (chloroplast) [Lam... 80 2e-15
gb|AGF30313.1| RNA polymerase beta'', partial (chloroplast) [Lam... 80 2e-15
gb|AGF30307.1| RNA polymerase beta'', partial (chloroplast) [Lam... 80 2e-15
gb|AGF30304.1| RNA polymerase beta'', partial (chloroplast) [Lam... 80 2e-15
gb|AGF30303.1| RNA polymerase beta'', partial (chloroplast) [Lam... 80 2e-15
gb|AGF30300.1| RNA polymerase beta'', partial (chloroplast) [Lam... 80 2e-15
emb|CAP11918.1| RNA polymerase beta subunit, partial (chloroplas... 80 2e-15
gb|OTG31223.1| putative RNA polymerase Rpb1, domain 5 [Helianthu... 80 3e-15
>gb|KHG12104.1| DNA-directed RNA polymerase subunit beta'' [Gossypium arboreum]
Length = 130
Score = 80.1 bits (196), Expect = 2e-16
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGIIAGQSIGEPGTQLTLRTFH GGVF GGTAEHVRAP
Sbjct: 40 EAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAP 79
>gb|AFS35535.1| RNA polymerase beta subunit, partial (plastid) [Fragaria moschata]
Length = 156
Score = 80.1 bits (196), Expect = 4e-16
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGIIAGQSIGEPGTQLTLRTFH GGVF GGTAEHVRAP
Sbjct: 17 EAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAP 56
>emb|CAP11904.1| RNA polymerase beta subunit, partial (chloroplast) [Acorus calamus]
emb|CAP11905.1| RNA polymerase beta subunit, partial (chloroplast) [Acorus
gramineus]
Length = 161
Score = 80.1 bits (196), Expect = 4e-16
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGIIAGQSIGEPGTQLTLRTFH GGVF GGTAEHVRAP
Sbjct: 73 EAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAP 112
>emb|CAP11916.1| RNA polymerase beta subunit, partial (chloroplast) [Hieracium
leyianum]
emb|CAP11917.1| RNA polymerase beta subunit, partial (chloroplast) [Hieracium
pellucidum]
Length = 170
Score = 80.1 bits (196), Expect = 5e-16
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGIIAGQSIGEPGTQLTLRTFH GGVF GGTAEHVRAP
Sbjct: 74 EAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAP 113
>emb|CAP11909.1| RNA polymerase beta subunit, partial (chloroplast) [Begonia
plagioneura]
Length = 159
Score = 79.7 bits (195), Expect = 6e-16
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGIIAGQSIGEPGTQLTLRTFH GGVF GGTAEH+RAP
Sbjct: 73 EAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAP 112
>emb|CAP11908.1| RNA polymerase beta subunit, partial (chloroplast) [Begonia
conchifolia]
Length = 159
Score = 79.7 bits (195), Expect = 6e-16
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGIIAGQSIGEPGTQLTLRTFH GGVF GGTAEH+RAP
Sbjct: 73 EAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHIRAP 112
>emb|CAP11906.1| RNA polymerase beta subunit, partial (chloroplast) [Aglaia
korthalsii]
emb|CAP11907.1| RNA polymerase beta subunit, partial (chloroplast) [Aglaia
odoratissima]
Length = 169
Score = 79.0 bits (193), Expect = 1e-15
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGII+GQSIGEPGTQLTLRTFH GGVF GGTAEHVRAP
Sbjct: 74 EAVGIISGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAP 113
>emb|CAP11921.1| RNA polymerase beta subunit, partial (chloroplast) [Sophora
toromiro]
Length = 221
Score = 80.1 bits (196), Expect = 2e-15
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGIIAGQSIGEPGTQLTLRTFH GGVF GGTAEHVRAP
Sbjct: 133 EAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAP 172
>emb|CAP11920.1| RNA polymerase beta subunit, partial (chloroplast) [Sophora
microphylla]
Length = 221
Score = 80.1 bits (196), Expect = 2e-15
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGIIAGQSIGEPGTQLTLRTFH GGVF GGTAEHVRAP
Sbjct: 133 EAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAP 172
>gb|AGF30344.1| RNA polymerase beta'', partial (chloroplast) [Lamium macrodon]
Length = 225
Score = 80.1 bits (196), Expect = 2e-15
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGIIAGQSIGEPGTQLTLRTFH GGVF GGTAEHVRAP
Sbjct: 136 EAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAP 175
>gb|AGF30336.1| RNA polymerase beta'', partial (chloroplast) [Lamium gevorense]
Length = 225
Score = 80.1 bits (196), Expect = 2e-15
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGIIAGQSIGEPGTQLTLRTFH GGVF GGTAEHVRAP
Sbjct: 136 EAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAP 175
>gb|AGF30327.1| RNA polymerase beta'', partial (chloroplast) [Lamium garganicum
subsp. corsicum]
gb|AGF30328.1| RNA polymerase beta'', partial (chloroplast) [Lamium garganicum
subsp. corsicum]
gb|AGF30329.1| RNA polymerase beta'', partial (chloroplast) [Lamium garganicum
subsp. garganicum]
gb|AGF30330.1| RNA polymerase beta'', partial (chloroplast) [Lamium garganicum
subsp. laevigatum]
gb|AGF30331.1| RNA polymerase beta'', partial (chloroplast) [Lamium garganicum
subsp. laevigatum]
gb|AGF30332.1| RNA polymerase beta'', partial (chloroplast) [Lamium garganicum
subsp. striatum]
gb|AGF30333.1| RNA polymerase beta'', partial (chloroplast) [Lamium garganicum
subsp. striatum]
gb|AGF30342.1| RNA polymerase beta'', partial (chloroplast) [Lamium lycium]
gb|AGF30343.1| RNA polymerase beta'', partial (chloroplast) [Lamium lycium]
gb|AGX85173.1| RpoC2, partial (chloroplast) [Lamium garganicum subsp. laevigatum]
Length = 225
Score = 80.1 bits (196), Expect = 2e-15
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGIIAGQSIGEPGTQLTLRTFH GGVF GGTAEHVRAP
Sbjct: 136 EAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAP 175
>gb|AGF30322.1| RNA polymerase beta'', partial (chloroplast) [Lamium galeobdolon
subsp. galeobdolon]
Length = 225
Score = 80.1 bits (196), Expect = 2e-15
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGIIAGQSIGEPGTQLTLRTFH GGVF GGTAEHVRAP
Sbjct: 136 EAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAP 175
>gb|AGF30313.1| RNA polymerase beta'', partial (chloroplast) [Lamium flexuosum]
gb|AGF30314.1| RNA polymerase beta'', partial (chloroplast) [Lamium flexuosum]
gb|AGX85170.1| RpoC2, partial (chloroplast) [Lamium flexuosum]
Length = 225
Score = 80.1 bits (196), Expect = 2e-15
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGIIAGQSIGEPGTQLTLRTFH GGVF GGTAEHVRAP
Sbjct: 136 EAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAP 175
>gb|AGF30307.1| RNA polymerase beta'', partial (chloroplast) [Lamium confertum]
gb|AGF30308.1| RNA polymerase beta'', partial (chloroplast) [Lamium confertum]
gb|AGF30309.1| RNA polymerase beta'', partial (chloroplast) [Lamium confertum]
gb|AGF30310.1| RNA polymerase beta'', partial (chloroplast) [Lamium confertum]
gb|AGF30311.1| RNA polymerase beta'', partial (chloroplast) [Lamium coutinhoi]
gb|AGF30312.1| RNA polymerase beta'', partial (chloroplast) [Lamium coutinhoi]
gb|AGF30315.1| RNA polymerase beta'', partial (chloroplast) [Lamium
galactophyllum]
gb|AGF30316.1| RNA polymerase beta'', partial (chloroplast) [Lamium galeobdolon
subsp. argentatum]
gb|AGF30317.1| RNA polymerase beta'', partial (chloroplast) [Lamium galeobdolon
subsp. argentatum]
gb|AGF30318.1| RNA polymerase beta'', partial (chloroplast) [Lamium galeobdolon
subsp. argentatum]
gb|AGF30319.1| RNA polymerase beta'', partial (chloroplast) [Lamium galeobdolon
subsp. flavidum]
gb|AGF30320.1| RNA polymerase beta'', partial (chloroplast) [Lamium galeobdolon
subsp. flavidum]
gb|AGF30321.1| RNA polymerase beta'', partial (chloroplast) [Lamium galeobdolon
subsp. flavidum]
gb|AGF30323.1| RNA polymerase beta'', partial (chloroplast) [Lamium galeobdolon
subsp. galeobdolon]
gb|AGF30324.1| RNA polymerase beta'', partial (chloroplast) [Lamium galeobdolon
subsp. montanum]
gb|AGF30325.1| RNA polymerase beta'', partial (chloroplast) [Lamium galeobdolon
subsp. montanum]
gb|AGF30326.1| RNA polymerase beta'', partial (chloroplast) [Lamium galeobdolon
subsp. montanum]
gb|AGF30334.1| RNA polymerase beta'', partial (chloroplast) [Lamium garganicum
var. armenum]
gb|AGF30337.1| RNA polymerase beta'', partial (chloroplast) [Lamium x holsaticum]
gb|AGF30338.1| RNA polymerase beta'', partial (chloroplast) [Lamium x holsaticum]
gb|AGF30345.1| RNA polymerase beta'', partial (chloroplast) [Lamium macrodon]
gb|AGF30346.1| RNA polymerase beta'', partial (chloroplast) [Lamium maculatum]
gb|AGF30347.1| RNA polymerase beta'', partial (chloroplast) [Lamium maculatum]
gb|AGF30348.1| RNA polymerase beta'', partial (chloroplast) [Lamium maculatum]
gb|AGF30349.1| RNA polymerase beta'', partial (chloroplast) [Lamium moschatum]
gb|AGF30350.1| RNA polymerase beta'', partial (chloroplast) [Lamium moschatum var.
rhodium]
gb|AGF30351.1| RNA polymerase beta'', partial (chloroplast) [Lamium orvala]
gb|AGF30352.1| RNA polymerase beta'', partial (chloroplast) [Lamium orvala]
gb|AGF30353.1| RNA polymerase beta'', partial (chloroplast) [Lamium purpureum]
gb|AGF30354.1| RNA polymerase beta'', partial (chloroplast) [Lamium purpureum]
gb|AGF30355.1| RNA polymerase beta'', partial (chloroplast) [Lamium purpureum]
gb|AGX85168.1| RpoC2, partial (chloroplast) [Lamium confertum]
gb|AGX85169.1| RpoC2, partial (chloroplast) [Lamium confertum]
gb|AGX85171.1| RpoC2, partial (chloroplast) [Lamium galeobdolon subsp. flavidum]
gb|AGX85172.1| RpoC2, partial (chloroplast) [Lamium galeobdolon subsp.
galeobdolon]
gb|AGX85176.1| RpoC2, partial (chloroplast) [Lamium maculatum]
gb|AGX85177.1| RpoC2, partial (chloroplast) [Lamium maculatum]
gb|AGX85178.1| RpoC2, partial (chloroplast) [Lamium maculatum]
gb|AGX85179.1| RpoC2, partial (chloroplast) [Lamium moschatum]
gb|AGX85180.1| RpoC2, partial (chloroplast) [Lamium orvala]
gb|AGX85181.1| RpoC2, partial (chloroplast) [Lamium orvala]
gb|AGX85182.1| RpoC2, partial (chloroplast) [Lamium orvala]
Length = 225
Score = 80.1 bits (196), Expect = 2e-15
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGIIAGQSIGEPGTQLTLRTFH GGVF GGTAEHVRAP
Sbjct: 136 EAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAP 175
>gb|AGF30304.1| RNA polymerase beta'', partial (chloroplast) [Lamium bifidum]
gb|AGF30305.1| RNA polymerase beta'', partial (chloroplast) [Lamium bifidum]
gb|AGF30306.1| RNA polymerase beta'', partial (chloroplast) [Lamium bifidum subsp.
balcanicum]
gb|AGF30335.1| RNA polymerase beta'', partial (chloroplast) [Lamium gevorense]
gb|AGF30339.1| RNA polymerase beta'', partial (chloroplast) [Lamium incisum]
gb|AGF30340.1| RNA polymerase beta'', partial (chloroplast) [Lamium incisum]
gb|AGF30341.1| RNA polymerase beta'', partial (chloroplast) [Lamium incisum]
gb|AGX85166.1| RpoC2, partial (chloroplast) [Lamium bifidum]
gb|AGX85167.1| RpoC2, partial (chloroplast) [Lamium bifidum]
gb|AGX85174.1| RpoC2, partial (chloroplast) [Lamium incisum]
gb|AGX85175.1| RpoC2, partial (chloroplast) [Lamium incisum]
Length = 225
Score = 80.1 bits (196), Expect = 2e-15
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGIIAGQSIGEPGTQLTLRTFH GGVF GGTAEHVRAP
Sbjct: 136 EAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAP 175
>gb|AGF30303.1| RNA polymerase beta'', partial (chloroplast) [Lamium amplexicaule]
Length = 225
Score = 80.1 bits (196), Expect = 2e-15
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGIIAGQSIGEPGTQLTLRTFH GGVF GGTAEHVRAP
Sbjct: 136 EAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAP 175
>gb|AGF30300.1| RNA polymerase beta'', partial (chloroplast) [Lamium amplexicaule]
gb|AGF30301.1| RNA polymerase beta'', partial (chloroplast) [Lamium amplexicaule]
gb|AGF30302.1| RNA polymerase beta'', partial (chloroplast) [Lamium amplexicaule]
Length = 225
Score = 80.1 bits (196), Expect = 2e-15
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGIIAGQSIGEPGTQLTLRTFH GGVF GGTAEHVRAP
Sbjct: 136 EAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAP 175
>emb|CAP11918.1| RNA polymerase beta subunit, partial (chloroplast) [Paeonia
kavachensis]
emb|CAP11919.1| RNA polymerase beta subunit, partial (chloroplast) [Paeonia
tenuifolia]
Length = 227
Score = 80.1 bits (196), Expect = 2e-15
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGIIAGQSIGEPGTQLTLRTFH GGVF GGTAEHVRAP
Sbjct: 129 EAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAP 168
>gb|OTG31223.1| putative RNA polymerase Rpb1, domain 5 [Helianthus annuus]
Length = 256
Score = 80.1 bits (196), Expect = 3e-15
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +1
Query: 319 EAVGIIAGQSIGEPGTQLTLRTFHAGGVFMGGTAEHVRAP 438
EAVGIIAGQSIGEPGTQLTLRTFH GGVF GGTAEHVRAP
Sbjct: 24 EAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAP 63