BLASTX nr result

ID: Rehmannia30_contig00020719 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00020719
         (519 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009429017.1| hypothetical protein (chloroplast) [Alpinia ...    60   2e-08

>ref|YP_009429017.1| hypothetical protein (chloroplast) [Alpinia oxyphylla]
 gb|ASW20479.1| hypothetical protein (chloroplast) [Alpinia oxyphylla]
          Length = 138

 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 28/37 (75%), Positives = 29/37 (78%)
 Frame = +1

Query: 1   LYYTVFYEMTHRPYILEFYIIDILFLSFSHPSIYPHL 111
           LYY  FYE+ HRPYILE YII I  LSFSHPSIY HL
Sbjct: 50  LYYIAFYEVIHRPYILESYIIYIFVLSFSHPSIYLHL 86


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