BLASTX nr result
ID: Rehmannia30_contig00019798
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00019798
(503 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_022888959.1| pentatricopeptide repeat-containing protein ... 73 7e-12
ref|XP_011094749.1| pentatricopeptide repeat-containing protein ... 72 2e-11
ref|XP_012831937.1| PREDICTED: pentatricopeptide repeat-containi... 66 2e-09
dbj|GAV84190.1| PPR domain-containing protein/PPR_2 domain-conta... 60 2e-07
ref|XP_018835388.1| PREDICTED: pentatricopeptide repeat-containi... 59 5e-07
ref|XP_021852264.1| pentatricopeptide repeat-containing protein ... 59 5e-07
gb|PPD92329.1| hypothetical protein GOBAR_DD10733 [Gossypium bar... 58 1e-06
ref|XP_016679045.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_012443371.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_012443370.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
gb|KZV51570.1| pentatricopeptide repeat-containing protein chlor... 57 2e-06
ref|XP_019077254.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_019077253.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_010653452.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
gb|POE44688.1| pentatricopeptide repeat-containing protein, chlo... 56 5e-06
ref|XP_023905056.1| pentatricopeptide repeat-containing protein ... 56 5e-06
ref|XP_010696356.1| PREDICTED: pentatricopeptide repeat-containi... 56 6e-06
ref|XP_019102681.1| PREDICTED: pentatricopeptide repeat-containi... 56 6e-06
>ref|XP_022888959.1| pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Olea europaea var. sylvestris]
Length = 418
Score = 72.8 bits (177), Expect = 7e-12
Identities = 35/58 (60%), Positives = 46/58 (79%)
Frame = +2
Query: 2 RRDKESPAHSNLNLEETREKSGSPQALESPTRRPVVLQRLKVTRKSLNHWLQRRTRSS 175
+ D E+P SNL LE+ + SPQ LESPTRRPVVLQRLK+T++SL+HWLQR+T ++
Sbjct: 360 KSDVENPVCSNLKLEDLKRSGPSPQ-LESPTRRPVVLQRLKITKESLHHWLQRKTAAT 416
>ref|XP_011094749.1| pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Sesamum indicum]
Length = 848
Score = 72.0 bits (175), Expect = 2e-11
Identities = 39/60 (65%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = +2
Query: 2 RRDKESPAHSNLNLEETREKSGSPQALESPT-RRPVVLQRLKVTRKSLNHWLQRRTRSST 178
RRD+ SP HSNL LEE ++S P A ESPT RRP+VLQRLKVTR+SL+ WLQR+ +ST
Sbjct: 785 RRDQGSPTHSNLKLEEF-DRSSLPHAPESPTTRRPLVLQRLKVTRESLHRWLQRKVGTST 843
>ref|XP_012831937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Erythranthe guttata]
gb|EYU41644.1| hypothetical protein MIMGU_mgv1a001284mg [Erythranthe guttata]
Length = 847
Score = 65.9 bits (159), Expect = 2e-09
Identities = 35/57 (61%), Positives = 45/57 (78%)
Frame = +2
Query: 5 RDKESPAHSNLNLEETREKSGSPQALESPTRRPVVLQRLKVTRKSLNHWLQRRTRSS 175
R K S +S+ ++ ET E+S S QA ESPTRRP+VLQRLKVTR+SL+HWLQ++ SS
Sbjct: 783 RGKGSRMYSS-SIGETIERSESKQASESPTRRPMVLQRLKVTRESLHHWLQKKMESS 838
>dbj|GAV84190.1| PPR domain-containing protein/PPR_2 domain-containing protein/PPR_3
domain-containing protein [Cephalotus follicularis]
Length = 846
Score = 60.1 bits (144), Expect = 2e-07
Identities = 28/50 (56%), Positives = 39/50 (78%)
Frame = +2
Query: 14 ESPAHSNLNLEETREKSGSPQALESPTRRPVVLQRLKVTRKSLNHWLQRR 163
E P +++ NL++ ++ + L SPTRRPV+LQRLKVTRKSL+HWLQR+
Sbjct: 791 EYPFNTDANLKDVLGRNRLSRELLSPTRRPVILQRLKVTRKSLHHWLQRK 840
>ref|XP_018835388.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Juglans regia]
Length = 861
Score = 58.9 bits (141), Expect = 5e-07
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = +2
Query: 14 ESPAHSNLNLEETREKSGSPQALESPTRRPVVLQRLKVTRKSLNHWLQRR 163
E S++NLEE ++ P LE TRRP ++QRLK+TRKSL++WLQRR
Sbjct: 806 ECTVESDINLEELIGRNSLPAKLECSTRRPAIVQRLKITRKSLHYWLQRR 855
>ref|XP_021852264.1| pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Spinacia oleracea]
gb|KNA09255.1| hypothetical protein SOVF_155200 [Spinacia oleracea]
Length = 861
Score = 58.9 bits (141), Expect = 5e-07
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = +2
Query: 11 KESPAHSNLNLEETREKSGSPQALESPTRRPVVLQRLKVTRKSLNHWLQRRTRSST 178
KE + + N + S P + ++P RRP VLQRL VT+KSLNHWLQRR+ S T
Sbjct: 804 KEGAFYPDSNSRDAPRMSELPNSFDAPARRPAVLQRLLVTKKSLNHWLQRRSDSGT 859
>gb|PPD92329.1| hypothetical protein GOBAR_DD10733 [Gossypium barbadense]
Length = 785
Score = 57.8 bits (138), Expect = 1e-06
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = +2
Query: 8 DKESPAHSNLNLEETREKSGSPQALESPTRRPVVLQRLKVTRKSLNHWLQRRT 166
D ++P + + LE+ + S S + L S TRRPV+LQRLKV RKSLNHWLQ+RT
Sbjct: 729 DLQTPGANTVLLEKAGKNSLSSKPLSS-TRRPVILQRLKVLRKSLNHWLQKRT 780
>ref|XP_016679045.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Gossypium hirsutum]
Length = 840
Score = 57.8 bits (138), Expect = 1e-06
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = +2
Query: 8 DKESPAHSNLNLEETREKSGSPQALESPTRRPVVLQRLKVTRKSLNHWLQRRT 166
D ++P + + LE+ + S S + L S TRRPV+LQRLKV RKSLNHWLQ+RT
Sbjct: 784 DLQTPGANTVLLEKAGKNSLSSKPLSS-TRRPVILQRLKVLRKSLNHWLQKRT 835
>ref|XP_012443371.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X2 [Gossypium raimondii]
gb|KJB62519.1| hypothetical protein B456_009G420800 [Gossypium raimondii]
Length = 861
Score = 57.8 bits (138), Expect = 1e-06
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = +2
Query: 8 DKESPAHSNLNLEETREKSGSPQALESPTRRPVVLQRLKVTRKSLNHWLQRRT 166
D ++P + + LE+ + S S + L S TRRPV+LQRLKV RKSLNHWLQ+RT
Sbjct: 805 DLQTPGANTVLLEKAGKNSLSSKPLSS-TRRPVILQRLKVLRKSLNHWLQKRT 856
>ref|XP_012443370.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X1 [Gossypium raimondii]
gb|KJB62520.1| hypothetical protein B456_009G420800 [Gossypium raimondii]
Length = 862
Score = 57.8 bits (138), Expect = 1e-06
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = +2
Query: 8 DKESPAHSNLNLEETREKSGSPQALESPTRRPVVLQRLKVTRKSLNHWLQRRT 166
D ++P + + LE+ + S S + L S TRRPV+LQRLKV RKSLNHWLQ+RT
Sbjct: 806 DLQTPGANTVLLEKAGKNSLSSKPLSS-TRRPVILQRLKVLRKSLNHWLQKRT 857
>gb|KZV51570.1| pentatricopeptide repeat-containing protein chloroplastic-like
[Dorcoceras hygrometricum]
Length = 777
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/44 (63%), Positives = 31/44 (70%)
Frame = +2
Query: 47 ETREKSGSPQALESPTRRPVVLQRLKVTRKSLNHWLQRRTRSST 178
E E S P A SP+RRPV LQRLKVTR+SL HWLQRR + T
Sbjct: 733 EVHEDSSLPPASRSPSRRPVALQRLKVTRESLQHWLQRRLVTPT 776
>ref|XP_019077254.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X4 [Vitis vinifera]
Length = 806
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = +2
Query: 20 PAHSNLNLEETREKSGSPQALESPTRRPVVLQRLKVTRKSLNHWLQRR 163
P S+ + +E ++ P LES TRRP VLQR KVTRKSL+HWLQRR
Sbjct: 753 PPGSDPDWQEALGRNRLPTELESSTRRPAVLQRFKVTRKSLDHWLQRR 800
>ref|XP_019077253.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X3 [Vitis vinifera]
Length = 836
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = +2
Query: 20 PAHSNLNLEETREKSGSPQALESPTRRPVVLQRLKVTRKSLNHWLQRR 163
P S+ + +E ++ P LES TRRP VLQR KVTRKSL+HWLQRR
Sbjct: 783 PPGSDPDWQEALGRNRLPTELESSTRRPAVLQRFKVTRKSLDHWLQRR 830
>ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X2 [Vitis vinifera]
emb|CBI32618.3| unnamed protein product, partial [Vitis vinifera]
Length = 842
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = +2
Query: 20 PAHSNLNLEETREKSGSPQALESPTRRPVVLQRLKVTRKSLNHWLQRR 163
P S+ + +E ++ P LES TRRP VLQR KVTRKSL+HWLQRR
Sbjct: 789 PPGSDPDWQEALGRNRLPTELESSTRRPAVLQRFKVTRKSLDHWLQRR 836
>ref|XP_010653452.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X1 [Vitis vinifera]
Length = 852
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = +2
Query: 20 PAHSNLNLEETREKSGSPQALESPTRRPVVLQRLKVTRKSLNHWLQRR 163
P S+ + +E ++ P LES TRRP VLQR KVTRKSL+HWLQRR
Sbjct: 799 PPGSDPDWQEALGRNRLPTELESSTRRPAVLQRFKVTRKSLDHWLQRR 846
>gb|POE44688.1| pentatricopeptide repeat-containing protein, chloroplastic [Quercus
suber]
Length = 761
Score = 56.2 bits (134), Expect = 5e-06
Identities = 29/54 (53%), Positives = 36/54 (66%)
Frame = +2
Query: 2 RRDKESPAHSNLNLEETREKSGSPQALESPTRRPVVLQRLKVTRKSLNHWLQRR 163
+ + ES S+LN E+ + LES TRRP V+QRLKVTRKSL +WLQRR
Sbjct: 702 KTNSESLLASDLNFEQLTRRKSLLTELESSTRRPDVVQRLKVTRKSLQYWLQRR 755
>ref|XP_023905056.1| pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Quercus suber]
Length = 854
Score = 56.2 bits (134), Expect = 5e-06
Identities = 29/54 (53%), Positives = 36/54 (66%)
Frame = +2
Query: 2 RRDKESPAHSNLNLEETREKSGSPQALESPTRRPVVLQRLKVTRKSLNHWLQRR 163
+ + ES S+LN E+ + LES TRRP V+QRLKVTRKSL +WLQRR
Sbjct: 795 KTNSESLLASDLNFEQLTRRKSLLTELESSTRRPDVVQRLKVTRKSLQYWLQRR 848
>ref|XP_010696356.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X2 [Beta vulgaris subsp. vulgaris]
gb|KMS97002.1| hypothetical protein BVRB_7g179510 [Beta vulgaris subsp. vulgaris]
Length = 864
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 8 DKESPAHSNLNLEETREKSGSPQALESPTRRPVVLQRLKVTRKSLNHWLQR 160
DK+ ++S L EKS P +L++P RRP VLQRL VT+KSL+HWL++
Sbjct: 807 DKKGTSNSVLKSRSVLEKSEFPYSLDTPARRPAVLQRLLVTKKSLSHWLRK 857
>ref|XP_019102681.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X1 [Beta vulgaris subsp. vulgaris]
Length = 872
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 8 DKESPAHSNLNLEETREKSGSPQALESPTRRPVVLQRLKVTRKSLNHWLQR 160
DK+ ++S L EKS P +L++P RRP VLQRL VT+KSL+HWL++
Sbjct: 815 DKKGTSNSVLKSRSVLEKSEFPYSLDTPARRPAVLQRLLVTKKSLSHWLRK 865