BLASTX nr result

ID: Rehmannia30_contig00019566 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00019566
         (522 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011070975.1| pentatricopeptide repeat-containing protein ...   112   6e-26
gb|PIN03703.1| hypothetical protein CDL12_23778 [Handroanthus im...   101   4e-24
gb|PIN03934.1| hypothetical protein CDL12_23541 [Handroanthus im...   100   7e-22
ref|XP_012855399.1| PREDICTED: pentatricopeptide repeat-containi...    84   1e-15
gb|KZV31075.1| hypothetical protein F511_31385 [Dorcoceras hygro...    63   3e-08
ref|XP_022851674.1| pentatricopeptide repeat-containing protein ...    59   5e-07

>ref|XP_011070975.1| pentatricopeptide repeat-containing protein At1g01970 [Sesamum
           indicum]
          Length = 416

 Score =  112 bits (279), Expect = 6e-26
 Identities = 57/101 (56%), Positives = 72/101 (71%), Gaps = 3/101 (2%)
 Frame = +3

Query: 228 MGYSAPNLFSLASPNCVNEQKISSTFQNPRWKNSLFQNHSIFRS---NLHQLLVFSYLNE 398
           MG  APNLFS+AS  C+++QK+ S F  P WKN  F ++S FR    +L QLL+ S +NE
Sbjct: 1   MGCLAPNLFSMASTICIHDQKLLSFFHRPLWKNPFFGHNSTFRCKKPHLCQLLILSCINE 60

Query: 399 SGDRGNAVKETENPKRKWVKKSPNLTEEQKQAISQLPSKMT 521
             +RG++VK  EN K KWV+ SPNLTEEQKQ ISQ P+KMT
Sbjct: 61  GENRGSSVKGIENAKFKWVRASPNLTEEQKQVISQFPTKMT 101


>gb|PIN03703.1| hypothetical protein CDL12_23778 [Handroanthus impetiginosus]
          Length = 163

 Score =  101 bits (252), Expect = 4e-24
 Identities = 54/98 (55%), Positives = 67/98 (68%)
 Frame = +3

Query: 228 MGYSAPNLFSLASPNCVNEQKISSTFQNPRWKNSLFQNHSIFRSNLHQLLVFSYLNESGD 407
           MGY AP+L S  SP C++ QK+  TF  P WK+S +Q +   +S   +LLVF  +NES  
Sbjct: 1   MGYFAPSLCSFPSPICIHGQKLLKTFHYPLWKHS-YQTYRCQKSEPFKLLVFCCINESDG 59

Query: 408 RGNAVKETENPKRKWVKKSPNLTEEQKQAISQLPSKMT 521
            GNA K TE  K KWV+ S NL+EE+KQAISQLPSKMT
Sbjct: 60  SGNARKPTEVQKYKWVRTSSNLSEEEKQAISQLPSKMT 97


>gb|PIN03934.1| hypothetical protein CDL12_23541 [Handroanthus impetiginosus]
          Length = 407

 Score =  100 bits (250), Expect = 7e-22
 Identities = 54/98 (55%), Positives = 67/98 (68%)
 Frame = +3

Query: 228 MGYSAPNLFSLASPNCVNEQKISSTFQNPRWKNSLFQNHSIFRSNLHQLLVFSYLNESGD 407
           MGY AP+L S  SP C++ QK+  TF  P WK+S +Q +   +S   +LLVF  +NES  
Sbjct: 1   MGYFAPSLCSFPSPICIHGQKLLKTFHYPLWKHS-YQTYRCQKSEPCKLLVFCCINESDG 59

Query: 408 RGNAVKETENPKRKWVKKSPNLTEEQKQAISQLPSKMT 521
            GNA K TE  K KWV+ S NL+EE+KQAISQLPSKMT
Sbjct: 60  SGNARKPTEVQKYKWVRTSSNLSEEEKQAISQLPSKMT 97


>ref|XP_012855399.1| PREDICTED: pentatricopeptide repeat-containing protein At1g01970
           [Erythranthe guttata]
          Length = 418

 Score = 83.6 bits (205), Expect = 1e-15
 Identities = 50/103 (48%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
 Frame = +3

Query: 228 MGYSAPNLFSLASPNCVNEQKISSTFQNPRWKNSLFQNHSIFR----SNLHQLLVFSYLN 395
           M   +PN  S+ SP C + QK    F NP W+N  F+ +  FR    SN  ++LVFS LN
Sbjct: 1   MASISPNFSSVTSPICTHAQKSLIAFHNPFWRNPFFRKYPNFRFSSKSNRCKMLVFSCLN 60

Query: 396 ES-GDRGNAVKETENPKRKWVKKSPNLTEEQKQAISQLPSKMT 521
           E  G   NAV + EN K   V+   +L+EEQKQAISQLPSKMT
Sbjct: 61  EGVGSGANAVIDAENRKSNRVRTVFDLSEEQKQAISQLPSKMT 103


>gb|KZV31075.1| hypothetical protein F511_31385 [Dorcoceras hygrometricum]
          Length = 413

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
 Frame = +3

Query: 225 LMGYSAPNLFSLASPNCVNEQKISSTFQNPRWKNSLFQNHSIFR---SNLHQLLVFSYLN 395
           LM     NL    SP C+  Q  +S    P    SLFQ+   F+   S L+Q L  S +N
Sbjct: 5   LMASLVCNLLPFPSPICMYSQSPTSIRHFPSMVASLFQDPLRFKRKMSRLYQQLALSCIN 64

Query: 396 ESGDRGNAVKETENPKRKWVKKSPNLTEEQKQAISQLPSKMT 521
                G + +E +  K KWV+K  N TEEQ+Q +SQLPSKM+
Sbjct: 65  GVEGCGISEEEEKKMKSKWVRKGFNSTEEQRQDVSQLPSKMS 106


>ref|XP_022851674.1| pentatricopeptide repeat-containing protein At1g01970 [Olea
           europaea var. sylvestris]
          Length = 413

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 31/102 (30%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
 Frame = +3

Query: 225 LMGYSAPNLFSLASPNCVNEQKISSTFQNPRWKNSLFQN---HSIFRSNLHQLLVFSYLN 395
           +MGY + ++  L +   +  + + +T++ P WKNS+ +N     + +SN   L +   +N
Sbjct: 1   MMGYFSTSISCLGNTFFMQTENVLNTYKFPVWKNSILRNPRGFKLIKSNFRPLSMVKSVN 60

Query: 396 ESGDRGNAVKETEN-PKRKWVKKSPNLTEEQKQAISQLPSKM 518
           E  ++    +E E  P+ +W+K   N++E QKQ I+Q+P KM
Sbjct: 61  EGENKEYTNEEKEEKPRFRWLKIDFNISEGQKQTIAQIPPKM 102


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