BLASTX nr result
ID: Rehmannia30_contig00018475
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00018475
(1002 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011094044.1| pentatricopeptide repeat-containing protein ... 137 1e-33
ref|XP_011094045.1| pentatricopeptide repeat-containing protein ... 137 2e-33
gb|PIN07100.1| hypothetical protein CDL12_20334 [Handroanthus im... 95 3e-18
ref|XP_010656709.1| PREDICTED: pentatricopeptide repeat-containi... 90 2e-16
ref|XP_022883048.1| pentatricopeptide repeat-containing protein ... 89 4e-16
ref|XP_004240282.2| PREDICTED: pentatricopeptide repeat-containi... 89 5e-16
ref|XP_022883047.1| pentatricopeptide repeat-containing protein ... 89 8e-16
ref|XP_015076094.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_012851341.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_006360650.1| PREDICTED: pentatricopeptide repeat-containi... 86 4e-15
ref|XP_006360648.1| PREDICTED: pentatricopeptide repeat-containi... 86 6e-15
ref|XP_018823503.1| PREDICTED: pentatricopeptide repeat-containi... 84 4e-14
ref|XP_021825167.1| pentatricopeptide repeat-containing protein ... 83 8e-14
ref|XP_019155609.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
gb|PHT48127.1| Pentatricopeptide repeat-containing protein [Caps... 82 2e-13
ref|XP_020411200.1| pentatricopeptide repeat-containing protein ... 82 2e-13
ref|XP_008223943.1| PREDICTED: pentatricopeptide repeat-containi... 82 2e-13
ref|XP_007222454.1| pentatricopeptide repeat-containing protein ... 82 2e-13
gb|PHU17644.1| Pentatricopeptide repeat-containing protein [Caps... 81 2e-13
ref|XP_016573154.1| PREDICTED: pentatricopeptide repeat-containi... 81 2e-13
>ref|XP_011094044.1| pentatricopeptide repeat-containing protein At3g42630 isoform X1
[Sesamum indicum]
Length = 420
Score = 137 bits (346), Expect = 1e-33
Identities = 71/115 (61%), Positives = 87/115 (75%)
Frame = +3
Query: 654 ENLWLCLEQSLQGKCDDYVDRRDACNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPD 833
+ W+CL+QSLQG + YV++R+ CNSGS I+ SGER LPL P K V KSE LLPD
Sbjct: 32 KKFWMCLDQSLQGNREYYVNKRNGCNSGSQIYSSSGER--LPLIPEKIV---KSESLLPD 86
Query: 834 DSALSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYGSMRDFDMV 998
+S LS LLL+YA NGL KA IW++MLNSSF+PDA+VVS+LIF+YG M DF MV
Sbjct: 87 NSTLSALLLYYARNGLLSKASEIWEQMLNSSFMPDAEVVSQLIFLYGGMGDFGMV 141
>ref|XP_011094045.1| pentatricopeptide repeat-containing protein At3g42630 isoform X2
[Sesamum indicum]
Length = 419
Score = 137 bits (345), Expect = 2e-33
Identities = 71/112 (63%), Positives = 86/112 (76%)
Frame = +3
Query: 663 WLCLEQSLQGKCDDYVDRRDACNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDSA 842
W+CL+QSLQG + YV++R+ CNSGS I+ SGER LPL P K V KSE LLPD+S
Sbjct: 34 WMCLDQSLQGNREYYVNKRNGCNSGSQIYSSSGER--LPLIPEKIV---KSESLLPDNST 88
Query: 843 LSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYGSMRDFDMV 998
LS LLL+YA NGL KA IW++MLNSSF+PDA+VVS+LIF+YG M DF MV
Sbjct: 89 LSALLLYYARNGLLSKASEIWEQMLNSSFMPDAEVVSQLIFLYGGMGDFGMV 140
>gb|PIN07100.1| hypothetical protein CDL12_20334 [Handroanthus impetiginosus]
Length = 347
Score = 94.7 bits (234), Expect = 3e-18
Identities = 47/67 (70%), Positives = 55/67 (82%)
Frame = +3
Query: 798 VYEKKSEGLLPDDSALSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYGS 977
V EKK EGLL D+S L+ LLL+YA NGLF K IWD+++NSSFVPD +VV ELIFIYGS
Sbjct: 2 VPEKKFEGLLLDNSTLASLLLYYAHNGLFSKVTEIWDDIMNSSFVPDVEVVVELIFIYGS 61
Query: 978 MRDFDMV 998
MRDF+MV
Sbjct: 62 MRDFEMV 68
>ref|XP_010656709.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
isoform X1 [Vitis vinifera]
ref|XP_019078694.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
isoform X1 [Vitis vinifera]
emb|CBI24061.3| unnamed protein product, partial [Vitis vinifera]
Length = 423
Score = 90.1 bits (222), Expect = 2e-16
Identities = 55/118 (46%), Positives = 73/118 (61%)
Frame = +3
Query: 648 WKENLWLCLEQSLQGKCDDYVDRRDACNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLL 827
WK+ E+S+ GK D+YVD LI S R+RLP + ++E KSEG L
Sbjct: 43 WKQ------ERSVDGK-DNYVDYTP------LIQALS--RKRLPHVAQELLFEMKSEGFL 87
Query: 828 PDDSALSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYGSMRDFDMVT 1001
P++S LS L+L YA NGLF KA +WDE++NSSF P+ ++VS+LI YG M F VT
Sbjct: 88 PNNSTLSALMLCYADNGLFPKAQALWDEIINSSFGPNIQIVSKLIDAYGKMGHFGEVT 145
>ref|XP_022883048.1| pentatricopeptide repeat-containing protein At3g42630 isoform X2
[Olea europaea var. sylvestris]
Length = 402
Score = 89.4 bits (220), Expect = 4e-16
Identities = 53/111 (47%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Frame = +3
Query: 672 LEQSLQGKCDDYVDRRDA-CNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDSALS 848
++ L GK VD DA S +H F+ R+ P E K +L +S LS
Sbjct: 16 MQSFLHGKYRSCVDWDDAYVEDASFVHNFN--RKFFPQITENFSLEVKPGDVLSYNSTLS 73
Query: 849 VLLLHYASNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYGSMRDFDMVT 1001
LLL YASNG + KA +WDE+LNSSFVPDA VVS+LI IYGS+ +FDMV+
Sbjct: 74 SLLLRYASNGFYSKAKAVWDEILNSSFVPDASVVSKLITIYGSVDNFDMVS 124
>ref|XP_004240282.2| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
[Solanum lycopersicum]
ref|XP_010321537.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
[Solanum lycopersicum]
Length = 406
Score = 89.0 bits (219), Expect = 5e-16
Identities = 49/95 (51%), Positives = 63/95 (66%)
Frame = +3
Query: 690 GKCDDYVDRRDACNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDSALSVLLLHYA 869
G D ++ RD SLI G S R++LP+ + V E KSEG +PD S LS L+L YA
Sbjct: 30 GNIDPRINYRDCA---SLIQGLS--RKKLPVAAERLVLEMKSEGFVPDSSTLSALMLCYA 84
Query: 870 SNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYG 974
+NGLF KA WDE++NSSF+PD V++ELI IYG
Sbjct: 85 TNGLFCKALAAWDEIMNSSFLPDVHVIAELIDIYG 119
>ref|XP_022883047.1| pentatricopeptide repeat-containing protein At3g42630 isoform X1
[Olea europaea var. sylvestris]
Length = 442
Score = 88.6 bits (218), Expect = 8e-16
Identities = 53/107 (49%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Frame = +3
Query: 684 LQGKCDDYVDRRDA-CNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDSALSVLLL 860
L GK VD DA S +H F+ R+ P E K +L +S LS LLL
Sbjct: 60 LHGKYRSCVDWDDAYVEDASFVHNFN--RKFFPQITENFSLEVKPGDVLSYNSTLSSLLL 117
Query: 861 HYASNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYGSMRDFDMVT 1001
YASNG + KA +WDE+LNSSFVPDA VVS+LI IYGS+ +FDMV+
Sbjct: 118 RYASNGFYSKAKAVWDEILNSSFVPDASVVSKLITIYGSVDNFDMVS 164
>ref|XP_015076094.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
[Solanum pennellii]
Length = 406
Score = 87.8 bits (216), Expect = 1e-15
Identities = 48/95 (50%), Positives = 63/95 (66%)
Frame = +3
Query: 690 GKCDDYVDRRDACNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDSALSVLLLHYA 869
G D ++ RD SLI G S +++LP+ + V E KSEG +PD S LS L+L YA
Sbjct: 30 GNIDPRINYRDCA---SLIQGLS--KKKLPVAAERLVLEMKSEGFVPDSSTLSALMLCYA 84
Query: 870 SNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYG 974
+NGLF KA WDE++NSSF+PD V++ELI IYG
Sbjct: 85 TNGLFCKALAAWDEIMNSSFLPDVHVIAELIDIYG 119
>ref|XP_012851341.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
[Erythranthe guttata]
Length = 411
Score = 87.4 bits (215), Expect = 2e-15
Identities = 48/109 (44%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
Frame = +3
Query: 678 QSLQGKCDDYVDRRDAC--NSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDSALSV 851
++L+G+ + +V+ A NS SL H L G+ + +KKS+ L D+S L
Sbjct: 34 RNLKGRYEGFVNITKASDSNSNSLSH----------LVSGRKILDKKSKALSADNSTLPA 83
Query: 852 LLLHYASNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYGSMRDFDMV 998
LLLHYA++G KA GIWDEM+NSS +P+A++VS+LIFI+G +DF V
Sbjct: 84 LLLHYAASGSLSKALGIWDEMINSSLMPNAQLVSQLIFIFGCTQDFGTV 132
>ref|XP_006360650.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
isoform X2 [Solanum tuberosum]
Length = 409
Score = 86.3 bits (212), Expect = 4e-15
Identities = 49/98 (50%), Positives = 63/98 (64%)
Frame = +3
Query: 678 QSLQGKCDDYVDRRDACNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDSALSVLL 857
QS K + R + + SLI G S R++LP+ + V E KSEG +PD S LS L+
Sbjct: 26 QSSAQKGGNIDPRGNYADCASLIQGLS--RKKLPVAAERLVLEMKSEGFVPDSSTLSALM 83
Query: 858 LHYASNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIY 971
L YASNGLF KA WDE++NSSF+PD V++ELI IY
Sbjct: 84 LCYASNGLFYKALAAWDEIMNSSFLPDVHVIAELIDIY 121
>ref|XP_006360648.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
isoform X1 [Solanum tuberosum]
Length = 416
Score = 85.9 bits (211), Expect = 6e-15
Identities = 46/86 (53%), Positives = 59/86 (68%)
Frame = +3
Query: 714 RRDACNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDSALSVLLLHYASNGLFDKA 893
R + + SLI G S R++LP+ + V E KSEG +PD S LS L+L YASNGLF KA
Sbjct: 45 RGNYADCASLIQGLS--RKKLPVAAERLVLEMKSEGFVPDSSTLSALMLCYASNGLFYKA 102
Query: 894 HGIWDEMLNSSFVPDAKVVSELIFIY 971
WDE++NSSF+PD V++ELI IY
Sbjct: 103 LAAWDEIMNSSFLPDVHVIAELIDIY 128
>ref|XP_018823503.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
[Juglans regia]
Length = 429
Score = 83.6 bits (205), Expect = 4e-14
Identities = 47/105 (44%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Frame = +3
Query: 687 QGKCDDYVDRRDA-CNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDSALSVLLLH 863
Q K D D++D+ +L+ S R+R+P + + E KSEG LP +S LS L+L
Sbjct: 48 QWKQDRGFDQKDSDAACAALVQDLS--RKRMPHLAQELLLEMKSEGFLPGNSTLSALMLC 105
Query: 864 YASNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYGSMRDFDMV 998
YA NGL +A IW+E++NSSFVP ++VSEL YG M FD V
Sbjct: 106 YAGNGLLQQAQAIWEEIINSSFVPSIQIVSELFDAYGKMEQFDDV 150
>ref|XP_021825167.1| pentatricopeptide repeat-containing protein At3g42630 isoform X1
[Prunus avium]
Length = 460
Score = 82.8 bits (203), Expect = 8e-14
Identities = 50/113 (44%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
Frame = +3
Query: 666 LCLEQSLQG-KCDDYVDRRDA-CNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDS 839
+CLEQ ++ K ++ D +D + LI S R+++P + + E KS+GLLP +S
Sbjct: 71 VCLEQIIRKWKQEECFDGKDIYVDCVPLIRSLS--RQKMPHVAQELLLEMKSDGLLPSNS 128
Query: 840 ALSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYGSMRDFDMV 998
LS L+L +A+NGLF +A IWDEML+SSFVP +VVSEL YG++ F+ V
Sbjct: 129 TLSALMLCHANNGLFPQAEAIWDEMLHSSFVPTIQVVSELFDAYGNVGCFEKV 181
>ref|XP_019155609.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g42630-like [Ipomoea nil]
ref|XP_019155610.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g42630-like [Ipomoea nil]
Length = 432
Score = 82.0 bits (201), Expect = 1e-13
Identities = 44/75 (58%), Positives = 52/75 (69%)
Frame = +3
Query: 774 LPLFPGKNVYEKKSEGLLPDDSALSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAKVVS 953
LPL + V KSEG L D S LS L+L YA+NGL KA +WDE+LNSSFV D +VV+
Sbjct: 79 LPLVAERLVLGMKSEGFLLDISTLSALMLCYANNGLLSKAQAVWDEILNSSFVLDVRVVA 138
Query: 954 ELIFIYGSMRDFDMV 998
+LI IYG M FDMV
Sbjct: 139 KLIDIYGCMGYFDMV 153
>gb|PHT48127.1| Pentatricopeptide repeat-containing protein [Capsicum baccatum]
Length = 410
Score = 81.6 bits (200), Expect = 2e-13
Identities = 45/88 (51%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +3
Query: 708 VDRRDA-CNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDSALSVLLLHYASNGLF 884
+DRR + SLI G S R++LP+ + + KSEG +PD S LS L+L YASNGLF
Sbjct: 39 IDRRSGYADCASLIQGLS--RKKLPVAAERLFLDMKSEGFIPDKSTLSALMLCYASNGLF 96
Query: 885 DKAHGIWDEMLNSSFVPDAKVVSELIFI 968
KA WDE+++SSF+PD VV+ELI I
Sbjct: 97 SKALAAWDEIIDSSFLPDVHVVAELIDI 124
>ref|XP_020411200.1| pentatricopeptide repeat-containing protein At3g42630 isoform X2
[Prunus persica]
Length = 415
Score = 81.6 bits (200), Expect = 2e-13
Identities = 41/78 (52%), Positives = 56/78 (71%)
Frame = +3
Query: 765 RERLPLFPGKNVYEKKSEGLLPDDSALSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAK 944
R+++P + V E KS+GLLP +S LS L+L +A+NGLF +A IWDEML+SSFVP +
Sbjct: 59 RQKMPHVAQELVLEMKSDGLLPSNSTLSALMLCHANNGLFPQAEAIWDEMLHSSFVPSIQ 118
Query: 945 VVSELIFIYGSMRDFDMV 998
VVSEL YG++ F+ V
Sbjct: 119 VVSELFDAYGNVGCFEKV 136
>ref|XP_008223943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
[Prunus mume]
ref|XP_008223944.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
[Prunus mume]
ref|XP_008223945.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
[Prunus mume]
Length = 423
Score = 81.6 bits (200), Expect = 2e-13
Identities = 52/117 (44%), Positives = 70/117 (59%)
Frame = +3
Query: 648 WKENLWLCLEQSLQGKCDDYVDRRDACNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLL 827
WK+ E+ GK D YVD LI S R+++P + + E KS+GLL
Sbjct: 43 WKQ------EECFDGK-DIYVD------CVPLIRSLS--RQKMPHVAQELLLEMKSDGLL 87
Query: 828 PDDSALSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAKVVSELIFIYGSMRDFDMV 998
P +S LS L+L +A+NGLF +A IWDEML+SSFVP +VVSEL YG++ F+ V
Sbjct: 88 PSNSTLSALMLCHANNGLFPQAEAIWDEMLHSSFVPSIQVVSELFDAYGNVGCFEKV 144
>ref|XP_007222454.1| pentatricopeptide repeat-containing protein At3g42630 isoform X1
[Prunus persica]
gb|ONI27041.1| hypothetical protein PRUPE_1G064400 [Prunus persica]
Length = 423
Score = 81.6 bits (200), Expect = 2e-13
Identities = 41/78 (52%), Positives = 56/78 (71%)
Frame = +3
Query: 765 RERLPLFPGKNVYEKKSEGLLPDDSALSVLLLHYASNGLFDKAHGIWDEMLNSSFVPDAK 944
R+++P + V E KS+GLLP +S LS L+L +A+NGLF +A IWDEML+SSFVP +
Sbjct: 67 RQKMPHVAQELVLEMKSDGLLPSNSTLSALMLCHANNGLFPQAEAIWDEMLHSSFVPSIQ 126
Query: 945 VVSELIFIYGSMRDFDMV 998
VVSEL YG++ F+ V
Sbjct: 127 VVSELFDAYGNVGCFEKV 144
>gb|PHU17644.1| Pentatricopeptide repeat-containing protein [Capsicum chinense]
Length = 410
Score = 81.3 bits (199), Expect = 2e-13
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Frame = +3
Query: 708 VDRRDA-CNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDSALSVLLLHYASNGLF 884
+DRR + SLI G S R++LP+ + + KSEG +PD S LS L+L YASNGLF
Sbjct: 39 IDRRSGYADCASLIQGLS--RKKLPVAAERLFLDMKSEGFIPDKSTLSALMLCYASNGLF 96
Query: 885 DKAHGIWDEMLNSSFVPDAKVVSELIFIYG 974
KA WDE+++ SF+PD VV+ELI I G
Sbjct: 97 SKALATWDEIIDRSFLPDVHVVAELIDICG 126
>ref|XP_016573154.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
[Capsicum annuum]
ref|XP_016573155.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
[Capsicum annuum]
ref|XP_016573156.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
[Capsicum annuum]
ref|XP_016573157.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
[Capsicum annuum]
gb|PHT81855.1| Pentatricopeptide repeat-containing protein [Capsicum annuum]
Length = 410
Score = 81.3 bits (199), Expect = 2e-13
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Frame = +3
Query: 708 VDRRDA-CNSGSLIHGFSGERERLPLFPGKNVYEKKSEGLLPDDSALSVLLLHYASNGLF 884
+DRR + SLI G S R++LP+ + + KSEG +PD S LS L+L YASNGLF
Sbjct: 39 IDRRSGYADCASLIQGLS--RKKLPVAAERLFLDMKSEGFIPDKSTLSALMLCYASNGLF 96
Query: 885 DKAHGIWDEMLNSSFVPDAKVVSELIFIYG 974
KA WDE+++ SF+PD VV+ELI I G
Sbjct: 97 SKALAAWDEIIDRSFLPDVHVVAELIDICG 126