BLASTX nr result

ID: Rehmannia30_contig00017731 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00017731
         (1326 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygro...    47   2e-07
gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit ...    44   6e-06
gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit ...    43   9e-06

>gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygrometricum]
          Length = 250

 Score = 47.0 bits (110), Expect(2) = 2e-07
 Identities = 19/44 (43%), Positives = 30/44 (68%)
 Frame = +2

Query: 134 KFCFIGKTQIFEMFDKNIPRFMFQFKNFSELATSDVDETSLYGK 265
           K  FI KT + E+FD + P  MF FK+F+ +  +++DET L+G+
Sbjct: 82  KINFITKTHVCEIFDDSFPSMMFDFKSFTNVKNAEIDETMLFGE 125



 Score = 38.1 bits (87), Expect(2) = 2e-07
 Identities = 20/48 (41%), Positives = 30/48 (62%)
 Frame = +1

Query: 1   IQGSIRKHNIQQFKKILM*GHVYAIRDFIVAPYSDKY*TCLTKHKILF 144
           I  S++K  + + K IL  GH++AI++ IVA    KY T  +K+KI F
Sbjct: 38  IHASVKKPVLDRVKPILKEGHLFAIKNIIVAENRMKYKTTASKYKINF 85


>gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit B-like [Dorcoceras
           hygrometricum]
          Length = 161

 Score = 43.5 bits (101), Expect(2) = 6e-06
 Identities = 17/42 (40%), Positives = 29/42 (69%)
 Frame = +2

Query: 134 KFCFIGKTQIFEMFDKNIPRFMFQFKNFSELATSDVDETSLY 259
           K  FI KT + E+FD + P  MF FK+F+++  ++++ET L+
Sbjct: 82  KINFITKTHVCEIFDDSFPSIMFDFKSFNDVKNAEIEETMLF 123



 Score = 37.0 bits (84), Expect(2) = 6e-06
 Identities = 19/48 (39%), Positives = 30/48 (62%)
 Frame = +1

Query: 1   IQGSIRKHNIQQFKKILM*GHVYAIRDFIVAPYSDKY*TCLTKHKILF 144
           I  S++K  + + + IL  GH++AI++ IVA    KY T  +K+KI F
Sbjct: 38  IHASVKKPVLDKVRHILKDGHLFAIKNIIVAENRMKYKTTTSKYKINF 85


>gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit [Dorcoceras
           hygrometricum]
          Length = 388

 Score = 42.7 bits (99), Expect(2) = 9e-06
 Identities = 17/42 (40%), Positives = 28/42 (66%)
 Frame = +2

Query: 134 KFCFIGKTQIFEMFDKNIPRFMFQFKNFSELATSDVDETSLY 259
           K  FI KT + E+FD + P  MF FK+F+ +  ++++ET L+
Sbjct: 162 KINFITKTHVCEIFDDSFPSMMFDFKSFTNVKNAEIEETMLF 203



 Score = 37.0 bits (84), Expect(2) = 9e-06
 Identities = 20/48 (41%), Positives = 29/48 (60%)
 Frame = +1

Query: 1   IQGSIRKHNIQQFKKILM*GHVYAIRDFIVAPYSDKY*TCLTKHKILF 144
           I  SI+K  +   + IL  GH++AI++ IVA    KY T  +K+KI F
Sbjct: 118 IHASIKKPVLDSVRPILKEGHLFAIKNIIVAENRMKYKTTASKYKINF 165


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