BLASTX nr result
ID: Rehmannia30_contig00017708
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00017708
(2452 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|GAU35153.1| hypothetical protein TSUD_217860 [Trifolium subt... 654 0.0
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] 644 0.0
emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa] 635 0.0
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 634 0.0
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group... 625 0.0
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] 628 0.0
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 620 0.0
ref|XP_020867873.1| uncharacterized protein LOC110224828 [Arabid... 602 0.0
gb|KYP39385.1| Retrovirus-related Pol polyprotein from transposo... 594 0.0
gb|KYP38573.1| Retrovirus-related Pol polyprotein from transposo... 605 0.0
gb|KZV32174.1| retrovirus-related Pol polyprotein from transposo... 583 0.0
ref|XP_022876705.1| uncharacterized protein LOC111394888 [Olea e... 579 0.0
gb|AIC77183.1| polyprotein [Gossypium barbadense] 597 0.0
gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposo... 594 0.0
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 592 0.0
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 592 0.0
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 590 0.0
gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposo... 591 0.0
gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposo... 591 0.0
ref|XP_009356290.1| PREDICTED: uncharacterized protein LOC103947... 571 0.0
>dbj|GAU35153.1| hypothetical protein TSUD_217860 [Trifolium subterraneum]
Length = 858
Score = 654 bits (1688), Expect = 0.0
Identities = 350/795 (44%), Positives = 501/795 (63%), Gaps = 12/795 (1%)
Frame = +3
Query: 90 SLEENSVKLQKELKKRDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILKQEFQGTEKTI 269
+L + K KE +++D+ AL ++QQ V SIFPRI G AKDAW LK+EFQG++K
Sbjct: 52 TLNVSQKKELKENEQKDSKALFFLQQAVEDSIFPRIMGATSAKDAWGTLKEEFQGSDKVR 111
Query: 270 ALKLQ*LWRDFDNLKMDDRE*VRDFSSRVTEIVNQIKSCGDTIQDKRVVEKVLRCLPPKF 449
A+KLQ L R+F+ ++M + E V+D+ +++ E+V+Q++S GD I DKR+VEK+L +P K+
Sbjct: 112 AIKLQTLRREFELIQMKESETVKDYYTKIKELVSQMRSYGDNILDKRIVEKILISIPRKY 171
Query: 450 DHAAAAIEESKDLSKMTMYELTGSLLAHEQRINRSAYPSTEQAFQSKQALKSSSSNRGEF 629
D IE++KDLS +++ EL GSL A+EQR+NR + E AFQSK L+S G
Sbjct: 172 DVIVTTIEQTKDLSTLSVTELIGSLEAYEQRLNRHDDNTIENAFQSKLKLRSQDKRYGVK 231
Query: 630 KGGSNYRKGNGKWRQNEKTSNWKGKXXXXXXXNPTCVICKKSNHESKDCFFR----CKRC 797
K G + N + +N + + K + P C ICK++NH K C +R C+ C
Sbjct: 232 KNG----RENSRNEENSRNFSKKNQEY------PPCGICKRTNHAEKYCRWRGKEQCQHC 281
Query: 798 KIPNHSQKDCWFQNXXXXXXXXXXXXXXQSK--EEILFYSS--ANCDSKNMWYLDSGCSN 965
K H +K+C+ +N E+ LFY++ +N D WYLDSGCSN
Sbjct: 282 KKFGHLEKNCYSKNKHQANFVEEHECEKDQHDYEQQLFYATQDSNDDLSKNWYLDSGCSN 341
Query: 966 HMTGNRDIFVDLNPNITSQIILGDGTQRSAKGKGTIAIQSKDGNKKFITDVLYVPNLSHN 1145
HM + IF D++ ++ ++ LG+GT +KGKGT+ +++K G + FI DVL VPNL N
Sbjct: 342 HMAKDESIFKDIDDSVKVKVRLGNGTIVESKGKGTVMVETKKGTR-FIKDVLLVPNLKEN 400
Query: 1146 LLSVGQLIQKDFSVHFDDGTCQILDKK-MNDVIASTEME--NNIFPLTMPLNENCALKVE 1316
LLS+GQ+++K +++HF+ TC I D IA +ME N FP++ N ALKV+
Sbjct: 401 LLSIGQMMEKGYTLHFEGDTCSIYDNSHKRHEIAKVKMEKRNRSFPISFKYTTNIALKVQ 460
Query: 1317 NADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMHKLPFP-KNS 1493
D S LWH R+GH N++ L +L +K M+ LP +++ ++ CEG + GK H+L FP + +
Sbjct: 461 -VDDSWLWHRRFGHFNTQALKMLYQKNMMRNLPYLKENSEACEGYLLGKQHRLAFPTRET 519
Query: 1494 WRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEAFSTFLQFKV 1673
WR K LEL+H+++CGPM+TP+ N RYFILFIDD++RM W+YF+ +KSE F F +FK
Sbjct: 520 WRTKYVLELIHTNVCGPMRTPSLNNNRYFILFIDDFSRMTWVYFIKEKSEVFGIFKKFKA 579
Query: 1674 LVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVAERKNRTIVE 1853
LVE+QSG IK LR+DRG E+ + F ++ + GI++Q TV+ +PQQNGV+ERKNR ++E
Sbjct: 580 LVEKQSGKHIKMLRSDRGKEYNSHEFDKFYEDEGIEQQQTVAYSPQQNGVSERKNRIVME 639
Query: 1854 MARSMLKGKGLPNLYWAEAVYTAVYILNRSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSI 2033
MARSM+K KGLPN +WAEAVY AVYILNR PTKAVQ+KTP E W +KP H RVFGSI
Sbjct: 640 MARSMMKDKGLPNTFWAEAVYIAVYILNRYPTKAVQDKTPIETWCGKKPSAKHLRVFGSI 699
Query: 2034 AYAHIPSQSREKFDEKGKKLLFIGYSDESKGYRLLDPNTNKVTISRDVVFDETATWDWKG 2213
Y H+P Q R K + K K +F+GYS +SKGYR+ + T K+ +SRDV DE A+W+W
Sbjct: 700 FYIHVPKQKRHKLENKTNKGIFLGYSTQSKGYRIYNLQTKKLDVSRDVEVDENASWNWVE 759
Query: 2214 KQVVDSISYEDPSTSQASSQVQNIEQDPKVPTPRIGAESDHESPIRRTRSLREIYESSEL 2393
++V + S + E+ P+P S ES R RSL +IYE+
Sbjct: 760 EKVERRNIFIPIPQSDIEDMEEAKEEPGTPPSPPQQEISSQESTPTRVRSLVDIYETYNF 819
Query: 2394 VLFTNETQTVQEATQ 2438
+ +++ V Q
Sbjct: 820 SMVDSKSYEVASKQQ 834
>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
Length = 1274
Score = 644 bits (1661), Expect = 0.0
Identities = 353/792 (44%), Positives = 479/792 (60%), Gaps = 19/792 (2%)
Frame = +3
Query: 120 KELKKRDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILKQEFQGTEKTIALKLQ*LWRD 299
KE K+D+ AL +IQQ V +SIF +I AK+AW LK FQG+ K I +KLQ L RD
Sbjct: 58 KENTKKDSKALFFIQQAVHESIFSKIAAATTAKEAWTTLKTAFQGSSKVITVKLQSLRRD 117
Query: 300 FDNLKMDDRE*VRDFSSRVTEIVNQIKSCGDTIQDKRVVEKVLRCLPPKFDHAAAAIEES 479
F+ L M + E ++DF + I D+ VV KVLR L PKFDH AAIEES
Sbjct: 118 FETLHMKNGESMQDFFVK-------------NILDQTVVAKVLRSLTPKFDHVVAAIEES 164
Query: 480 KDLSKMTMYELTGSLLAHEQRINRSAYPSTEQAFQSKQALKSS------SSNRGEFKGGS 641
KDLS + EL GSL +HE R++R+ + E+AF +K ++ RG +GG+
Sbjct: 165 KDLSTYSFDELMGSLQSHEVRLSRTEEKNEEKAFYTKGETSDQKNGGREATGRGRGRGGA 224
Query: 642 NYRKGNGKWRQNEKTSNWKGKXXXXXXXNPTCVICKKSNHESKDCFFRCKRCKIPNHSQK 821
+ R G G+ R + + + N C CK+ H +C+ + ++ K N+ ++
Sbjct: 225 HGRGGRGRGRGDAQGYQRQSTEKNRNKSNIQCYYCKRFGHVQXECWKKERQEKQANYVEQ 284
Query: 822 DCWFQNXXXXXXXXXXXXXXQSKEEILFYSSANCDSKNMWYLDSGCSNHMTGNRDIFVDL 1001
+ + + Y+ S N+W+LDSGCSNHMTG + +F +L
Sbjct: 285 E------------------EDQVKLFMXYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKEL 326
Query: 1002 NPNITSQIILGDGTQRSAKGKGTIAIQSKDGNKKFITDVLYVPNLSHNLLSVGQLIQKDF 1181
+ + ++ LGD Q +GKG +A+ + GN K + +V ++P+L+ NLLSVGQL+ +
Sbjct: 327 DESHKLKVKLGDDKQVXVEGKGIMAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGY 386
Query: 1182 SVHFDDGTCQILDKKMNDVIASTEME-NNIFPLTMPLNENCALKVENADLSNLWHLRYGH 1358
S+ FD TC I DKK + +I + M N +FPL + E AL V+ SNLWHLRYGH
Sbjct: 387 SILFDGATCVIKDKKSDQIIVNVRMAANKLFPLEVSSIEKHALVVKETSESNLWHLRYGH 446
Query: 1359 LNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMHKLPFPKN-SWRAKAPLELVHSDI 1535
LN KGL LL +K+MV GLP I +N VCEGCIYGK K PFPK S RA + LE++H+D+
Sbjct: 447 LNVKGLKLLSKKEMVFGLPKIDSVN-VCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADL 505
Query: 1536 CGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEAFSTFLQFKVLVERQSGFLIKTLR 1715
CGPMQT + G RYF+LF DD++RM W+YFL K+E F TF +FK VE+QSG IK LR
Sbjct: 506 CGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLR 565
Query: 1716 TDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVAERKNRTIVEMARSMLKGKGLPNL 1895
TDRGGEFL N F +C+ G+ R+LT +P+QNGVAERKNRT+VEMARSM+K K L N
Sbjct: 566 TDRGGEFLSNDFKVFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEMARSMMKAKNLSNH 625
Query: 1896 YWAEAVYTAVYILNRSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFD 2075
+WAE V TAVY+LN SPTKAV N+TPYEAWY +KP V H +VFGS+AY I S + D
Sbjct: 626 FWAEGVATAVYLLNISPTKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYTLIDSHNHSNLD 685
Query: 2076 EKGKKLLFIGYSDESKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQVVDSISYEDPST 2255
EK K +FIGY +SKGY+L +P + K+ +SR+VV DE A+W W+ + + S
Sbjct: 686 EKSIKCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVXDEKASWTWRVSEDGALVEISSESE 745
Query: 2256 SQASSQVQNIEQDPKVPTP-----------RIGAESDHESPIRRTRSLREIYESSELVLF 2402
S Q Q P PTP ++S E+P R+ RSLR+IYE+++ VLF
Sbjct: 746 VAQSEDQQPSVQIPAXPTPSHSPSSPNLSSSSSSQSSEETPPRKFRSLRDIYETTQ-VLF 804
Query: 2403 TNETQTVQEATQ 2438
+ T +EA +
Sbjct: 805 VADPTTFEEAVE 816
>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa]
Length = 1314
Score = 635 bits (1638), Expect = 0.0
Identities = 360/820 (43%), Positives = 503/820 (61%), Gaps = 39/820 (4%)
Frame = +3
Query: 90 SLEENSVKLQKELKKRDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILKQEFQGTEKTI 269
+L K E + DA AL IQQGV +S+FPRI G KK+K+AW+ LK+EFQG++K +
Sbjct: 46 TLTAEQKKSLAEDRMSDAKALFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVL 105
Query: 270 ALKLQ*LWRDFDNLKMDDRE*VRDFSSRVTEIVNQIKSCGDTIQDKRVVEKVLRCLPPKF 449
A+KLQ L R F NL M + E V+D+ SRV EIVNQ++ G+ I D++VVEK+L LP K+
Sbjct: 106 AVKLQTLRRQFQNLLMKESEKVKDYFSRVIEIVNQMRLYGEDINDQKVVEKILISLPEKY 165
Query: 450 DHAAAAIEESKDLSKMTMYELTGSLLAHEQRINRSAYPSTEQAFQSKQALKSSSSN-RGE 626
++ AAIEESKDLS +T+ +L SL +HE+R + S E AFQSK + + +S RG
Sbjct: 166 EYIVAAIEESKDLSTLTIQQLMSSLESHEERKLQREGSSIENAFQSKLSFRPQNSRFRGN 225
Query: 627 FKGGSNYRKGNGKWRQN----EKTSNWKGKXXXXXXXNPTCVICKKSNHESKDCFFR--C 788
F+ + G +++N +K + + N C I +KS+H + C+ + C
Sbjct: 226 FQKNGFPMRDRGYFQKNGFSTQKEDGQERREKSTSSSNLWCDISQKSSHTTDMCWKKMTC 285
Query: 789 KRCKIPNHSQKDCWFQNXXXXXXXXXXXXXXQSKEEILFYSSANCDSKNMWYLDSGCSNH 968
+CK H K C +S+E + +A + ++W +DSGC+NH
Sbjct: 286 NKCKRKGHIAKYC---RTREINRANFSQEKEKSEEMVFSCHTAQEEKDDVWVIDSGCTNH 342
Query: 969 MTGNRDIFVDLNPNITSQIILGDGTQRSAKGKGTIAIQSKDGNKKFITDVLYVPNLSHNL 1148
M + ++F +++ ++I +G+G+ ++GKGT+A+Q+ DG KFI DVL VP+L NL
Sbjct: 343 MAADPNLFREMDSLYHAKIHMGNGSIAQSEGKGTVAVQTADG-PKFIKDVLLVPDLKQNL 401
Query: 1149 LSVGQLIQKDFSVHFDDGTCQILDKKMNDVIASTEMENNI-FPLTMPLNENCALKVENAD 1325
LS+GQL++ ++V+F+D +C+ILD+K N ++A ME N F L M AL+ E D
Sbjct: 402 LSIGQLLEHGYAVYFEDFSCKILDRKNNRLVAKINMEKNRNFLLRMNHTTQMALRSE-VD 460
Query: 1326 LSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMHKLPFPKN-SWRA 1502
+S+LWH R GHLN + L LL+ K MV GLP I + CEGC++GK + FP + +WRA
Sbjct: 461 ISDLWHKRMGHLNYRALKLLRTKGMVQGLPFITLKSDPCEGCVFGKQIQASFPHSGAWRA 520
Query: 1503 KAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEAFSTFLQFKVLVE 1682
AP ELVH+DI G + T + G YFI FIDDYTRM+W+YFL +KS A TF +FKV+VE
Sbjct: 521 SAPFELVHTDIVGKVPTMSEGGNWYFITFIDDYTRMIWVYFLKEKSAALETFKKFKVMVE 580
Query: 1683 RQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVAERKNRTIVEMAR 1862
QS IK LR+D+GGE++ F +YC+ GI+RQLT + QQNGVAERKNRTI +MA
Sbjct: 581 NQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLTTGYSAQQNGVAERKNRTINDMAN 640
Query: 1863 SMLKGKGLPNLYWAEAVYTAVYILNRSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYA 2042
SML+ KG+P +WAEAV TAVYILNRSPTKAV N+TP+EAWY +KP + H RVF I YA
Sbjct: 641 SMLQDKGMPKSFWAEAVNTAVYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFACICYA 700
Query: 2043 HIPSQSREKFDEKGKKLLFIGYSDESKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQV 2222
+P+Q R KFD K + +F+GY+D KGYRL + K+ ISRDV FDE+ATW+WK +
Sbjct: 701 QVPAQKRVKFDNKSNRCIFVGYADGIKGYRLYNLEKKKIIISRDVFFDESATWNWKSPEA 760
Query: 2223 -------VDSISYEDPSTSQASSQVQNIEQDPKVPTPRIGAE-------------SDHES 2342
+I+ P + +V++ P+ +P + S ES
Sbjct: 761 SSTPLLPTTTITLGQPH-MHGTHEVEDHTPSPQPSSPMSSSSASSDSSPSSEEQISTPES 819
Query: 2343 PIRRTRSLREIYES------SELVLFTN----ETQTVQEA 2432
RR RS+ E+ ES SE F N E Q+ QEA
Sbjct: 820 APRRVRSMVELLESTSQQRGSEQHEFCNYSVVEPQSFQEA 859
>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 634 bits (1636), Expect = 0.0
Identities = 356/779 (45%), Positives = 475/779 (60%), Gaps = 15/779 (1%)
Frame = +3
Query: 81 ISMSLEENSVKLQKELKKRDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILKQEFQGTE 260
+ + E + +E +KRD+ AL IQQ + IFPRI V+ +K AWEILKQE+ G +
Sbjct: 42 VETGIPEGNANQMREHRKRDSKALFTIQQALDDEIFPRISAVETSKQAWEILKQEYFGDD 101
Query: 261 KTIALKLQ*LWRDFDNLKMDDRE*VRDFSSRVTEIVNQIKSCGDTIQDKRVVEKVLRCLP 440
K I +KLQ L RDF+ L M++ E V+ + SR + IVN+++S G+ I ++ VV KVLR L
Sbjct: 102 KVITVKLQTLRRDFETLFMNENESVQGYLSRTSAIVNRMRSYGEKIDNQIVVSKVLRSLT 161
Query: 441 PKFDHAAAAIEESKDLSKMTMYELTGSLLAHEQRINRSAYPSTEQAFQSKQALKSSSSNR 620
KF+H AIEESKDLS + EL SLLAHE R+NRS E+AFQ +K S +
Sbjct: 162 TKFEHVVTAIEESKDLSTYSFDELMSSLLAHEDRLNRSREKVQEKAFQ----VKGEFSYK 217
Query: 621 GEFKGGSNYRKGNGKWRQNEKTSNWKGKXXXXXXX----NPTCVICKKSNHESKDCFFRC 788
G+ + + G G +R + + +G+ N C CKK H+ DC+ +
Sbjct: 218 GKAENSAGRGHGRGNFRGRGRGGSGRGRNQVGEFRQYKSNIQCRYCKKFGHKEVDCWTKQ 277
Query: 789 KRCKIPNHSQKDCWFQNXXXXXXXXXXXXXXQSKEEILFYSSANCDSKN-MWYLDSGCSN 965
K QKD F + + ++ SS +S N +W++DSGCSN
Sbjct: 278 K------DEQKDANFTQNV------------EEESKLFMASSQITESANAVWFIDSGCSN 319
Query: 966 HMTGNRDIFVDLNPNITSQIILGDGTQRSAKGKGTIAIQSKDGNKKFITDVLYVPNLSHN 1145
HM+ ++ +F DL+ + S++ LGD Q +GKGT+ I++ GN KF+ DV YVP L+HN
Sbjct: 320 HMSSSKSLFRDLDESQKSEVRLGDDKQVHIEGKGTVEIKTVQGNVKFLYDVQYVPTLAHN 379
Query: 1146 LLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIASTEM-ENNIFPLTMPLNENCALKVENA 1322
LLSVGQL+ +SV F D C I DK+ IA M +N +FPL + N AL V+
Sbjct: 380 LLSVGQLMTSGYSVVFYDNACDIKDKESGRTIARVPMTQNKMFPLDISNVGNSALVVKEK 439
Query: 1323 DLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMHKLPFPKN-SWR 1499
+ +NLWHLRYGHLN L LL +K MVIGLP+I++++ +CEGCIYGK + FP SWR
Sbjct: 440 NETNLWHLRYGHLNVNWLKLLVQKDMVIGLPNIKELD-LCEGCIYGKQTRKSFPVGKSWR 498
Query: 1500 AKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEAFSTFLQFKVLV 1679
A LELVH+D+CGPM+ + G RYF++F DDY+R W+YFL KSE F TF +FK V
Sbjct: 499 ATTCLELVHADLCGPMKMESLGGSRYFLMFTDDYSRFSWVYFLKFKSETFETFKKFKAFV 558
Query: 1680 ERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVAERKNRTIVEMA 1859
E QSG IK+LRTDRGGEFL N F +C+ NGI+R+LT TP+QNGVAERKNRT+VEMA
Sbjct: 559 ENQSGNKIKSLRTDRGGEFLSNDFNLFCEENGIRRELTAPYTPEQNGVAERKNRTVVEMA 618
Query: 1860 RSMLKGKGLPNLYWAEAVYTAVYILNRSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAY 2039
RS LK KGLP+ +W EAV T VY LN SPTK V N TP EAW +KP+V H R+FG IAY
Sbjct: 619 RSSLKAKGLPDYFWGEAVATVVYFLNISPTKDVWNTTPLEAWNGKKPRVSHLRIFGCIAY 678
Query: 2040 AHIPSQSREKFDEKGKKLLFIGYSDESKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQ 2219
A + S K DEK K +F+GYS +SK YRL +P + KV ISR+VVF+E +W++
Sbjct: 679 ALVNFHS--KLDEKSTKCIFVGYSLQSKAYRLYNPISGKVIISRNVVFNEDVSWNFNSGN 736
Query: 2220 VVDSI--------SYEDPSTSQASSQVQNIEQDPKVPTPRIGAESDHESPIRRTRSLRE 2372
++ +I S D S SS V + P P+ + + PI RS RE
Sbjct: 737 MMSNIQLLPTDEESAVDFGNSPNSSPVSSSVSSPIAPSTTVAPDESSVEPIPLRRSTRE 795
>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
gb|ABF99717.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1335
Score = 625 bits (1613), Expect = 0.0
Identities = 357/820 (43%), Positives = 499/820 (60%), Gaps = 39/820 (4%)
Frame = +3
Query: 90 SLEENSVKLQKELKKRDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILKQEFQGTEKTI 269
+L K E + DA AL IQQGV +S+FPRI G KK+K+AW+ LK+EFQG++K +
Sbjct: 46 TLTAEQKKSLAEDRMSDAKALFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVL 105
Query: 270 ALKLQ*LWRDFDNLKMDDRE*VRDFSSRVTEIVNQIKSCGDTIQDKRVVEKVLRCLPPKF 449
A+KLQ L R F NL M + E V+D+ SRV EIVNQ++ G+ I D++VVEK+L LP K+
Sbjct: 106 AVKLQTLRRQFQNLLMKESEKVKDYFSRVIEIVNQMRLYGEDINDQKVVEKILISLPEKY 165
Query: 450 DHAAAAIEESKDLSKMTMYELTGSLLAHEQRINRSAYPSTEQAFQSKQALKSSSSN-RGE 626
++ AA EESKDLSK SL +HE+R + S E AFQSK + + +S RG
Sbjct: 166 EYIVAATEESKDLSK-------DSLESHEERKLQREGSSIENAFQSKLSFRPQNSRFRGN 218
Query: 627 FKGGSNYRKGNGKWRQN----EKTSNWKGKXXXXXXXNPTCVICKKSNHESKDCFFR--C 788
F+ + G +++N +K + + N C IC+KS+H + C+ + C
Sbjct: 219 FQKNGFPMRDRGYFQKNGFSRQKEDGQERREKGTSSSNLWCDICQKSSHTTDMCWKKMTC 278
Query: 789 KRCKIPNHSQKDCWFQNXXXXXXXXXXXXXXQSKEEILFYSSANCDSKNMWYLDSGCSNH 968
+CK H K C +S+E + +A + ++W +DSGC+NH
Sbjct: 279 NKCKRKGHIAKYC---RTREINRANFSQEKEKSEEMVFSCHTAQEEKDDVWVIDSGCTNH 335
Query: 969 MTGNRDIFVDLNPNITSQIILGDGTQRSAKGKGTIAIQSKDGNKKFITDVLYVPNLSHNL 1148
M + ++F +++ + ++I +G+G+ ++GKGT+A+Q+ DG KFI DVL VP+L NL
Sbjct: 336 MAADPNLFREMDSSYHAKIHMGNGSIAQSEGKGTVAVQTADG-PKFIKDVLLVPDLKQNL 394
Query: 1149 LSVGQLIQKDFSVHFDDGTCQILDKKMNDVIASTEMENNI-FPLTMPLNENCALKVENAD 1325
LS+GQL++ ++V+F+D +C+ILD+K N ++A ME N F L M AL+ E D
Sbjct: 395 LSIGQLLEHGYAVYFEDFSCKILDRKNNRLVAKINMEKNRNFLLRMNHTTQMALRSE-VD 453
Query: 1326 LSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMHKLPFPKN-SWRA 1502
+S+LWH R GHLN + L LL+ K MV GLP I + CEGC++GK + FP + +WRA
Sbjct: 454 ISDLWHKRMGHLNYRALKLLRTKGMVQGLPFITLKSDPCEGCVFGKQIRASFPHSGAWRA 513
Query: 1503 KAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEAFSTFLQFKVLVE 1682
APLELVH+DI G + T + G YFI FIDDYTRM+W+YFL +KS A F +FK +VE
Sbjct: 514 SAPLELVHADIVGKVPTISEGGNWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAMVE 573
Query: 1683 RQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVAERKNRTIVEMAR 1862
QS IK LR+D+G E++ F +YC+ GI+RQLT + QQNGVAERKNRTI +MA
Sbjct: 574 NQSNRKIKVLRSDQGREYISKEFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDMAN 633
Query: 1863 SMLKGKGLPNLYWAEAVYTAVYILNRSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYA 2042
SML+ KG+P +WAEAV TAVYILNRSPTKAV N+TP+EAWY +KP + H RVFG I YA
Sbjct: 634 SMLQDKGMPKSFWAEAVNTAVYILNRSPTKAVTNRTPFEAWYGKKPVIGHMRVFGCICYA 693
Query: 2043 HIPSQSREKFDEKGKKLLFIGYSDESKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQV 2222
+P+Q R KFD K + +F+GY+D KGYRL + K+ ISRD +FDE+ATW+WK +
Sbjct: 694 QVPAQKRVKFDNKSDRCIFVGYADGIKGYRLYNLEKKKIIISRDAIFDESATWNWKSPEA 753
Query: 2223 -------VDSISYEDPSTSQASSQVQNIEQDPKVPTPRIGAE-------------SDHES 2342
+I+ P + +V++ P+ +P + S ES
Sbjct: 754 SSTPLLPTTTITLGQPH-MHGTHEVEDHTPSPQPSSPMSSSSASSDSSPSSEEQISTPES 812
Query: 2343 PIRRTRSLREIYES------SELVLFTN----ETQTVQEA 2432
RR RS+ E+ ES SE F N E Q+ QEA
Sbjct: 813 APRRVRSMVELLESTSQQRGSEQHEFCNYSVVEPQSFQEA 852
>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
Length = 1472
Score = 628 bits (1619), Expect = 0.0
Identities = 345/743 (46%), Positives = 458/743 (61%), Gaps = 8/743 (1%)
Frame = +3
Query: 120 KELKKRDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILKQEFQGTEKTIALKLQ*LWRD 299
KE K+D+ AL +IQQ V +SIF +I AK+AW LK FQG+ K I +KLQ L RD
Sbjct: 58 KENTKKDSKALFFIQQAVHESIFSKIAAXTTAKEAWTTLKTAFQGSSKVITVKLQSLRRD 117
Query: 300 FDNLKMDDRE*VRDFSSRVTEIVNQIKSCGDTIQDKRVVEKVLRCLPPKFDHAAAAIEES 479
F+ L M + E V+DF SRV IVNQ++S G+ I D+ VV KVLR L PKFDH AAIEES
Sbjct: 118 FETLHMKNGESVQDFLSRVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAAIEES 177
Query: 480 KDLSKMTMYELTGSLLAHEQRINRSAYPSTEQAFQSKQALKSS------SSNRGEFKGGS 641
KDLS + EL GSL +HE R++R+ + E+ F +K ++ RG +GG+
Sbjct: 178 KDLSTYSFDELMGSLQSHEVRLSRTEEKNEEKXFYTKGETSDQKNGGREATGRGCGRGGA 237
Query: 642 NYRKGNGKWRQNEKTSNWKGKXXXXXXXNPTCVICKKSNHESKDCFFRCKRCKIPNHSQK 821
+ R G G+ R + + W KK E K N+ ++
Sbjct: 238 HGRGGRGRGRGDAQXECW-----------------KKERQE-----------KQANYVEQ 269
Query: 822 DCWFQNXXXXXXXXXXXXXXQSKEEILFYSSANCDSKNMWYLDSGCSNHMTGNRDIFVDL 1001
+ + + Y+ S N+W+LDSGCSNHMTG + +F +L
Sbjct: 270 E------------------EDQVKLFMAYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKEL 311
Query: 1002 NPNITSQIILGDGTQRSAKGKGTIAIQSKDGNKKFITDVLYVPNLSHNLLSVGQLIQKDF 1181
+ + ++ LGD Q +GKGT A+ + GN K + +V ++P+L+ NLLSVGQL+ +
Sbjct: 312 DESHKLKVKLGDDKQVQVEGKGTXAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGY 371
Query: 1182 SVHFDDGTCQILDKKMNDVIASTEME-NNIFPLTMPLNENCALKVENADLSNLWHLRYGH 1358
S+ FD TC I DKK + +I M N +FPL + E AL V+ SNLWHLRYGH
Sbjct: 372 SILFDGATCVIKDKKSDQIIVBVRMAANKLFPLEVSSIEKHALVVKETSESNLWHLRYGH 431
Query: 1359 LNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMHKLPFPKN-SWRAKAPLELVHSDI 1535
LN KGL LL +K+MV GLP I +N VCEGCIYGK K PFPK S RA + LE++H+D+
Sbjct: 432 LNVKGLKLLSKKEMVFGLPKIDSVN-VCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADL 490
Query: 1536 CGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEAFSTFLQFKVLVERQSGFLIKTLR 1715
CGPMQT + G RYF+LF DD++RM W+YFL K+E F TF +FK VE+QSG IK LR
Sbjct: 491 CGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLR 550
Query: 1716 TDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVAERKNRTIVEMARSMLKGKGLPNL 1895
TDRGGEFL N F + + G+ R+LT +P QNGVAERKNRT+VEMARSM+K K L N
Sbjct: 551 TDRGGEFLSNDFKVFXEEEGLHRELTTPYSPXQNGVAERKNRTVVEMARSMMKAKNLSNH 610
Query: 1896 YWAEAVYTAVYILNRSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFD 2075
+WAE V TAVY+LN SPTKAV N+TPYEAWY +KP V H +VFGS+AY I S +R K D
Sbjct: 611 FWAEGVATAVYLLNISPTKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYTLIDSHNRSKLD 670
Query: 2076 EKGKKLLFIGYSDESKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQVVDSISYEDPST 2255
EK K +FIGY +SKGY+L +P + K+ +SR+VVFDE A+W W+ ED +
Sbjct: 671 EKSVKCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVFDEKASWTWRVS--------EDGAL 722
Query: 2256 SQASSQVQNIEQDPKVPTPRIGA 2324
+ SS+ + + + + P+ +I A
Sbjct: 723 VEISSESEVAQSEDQQPSXQIPA 745
>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
Length = 1430
Score = 620 bits (1598), Expect = 0.0
Identities = 344/792 (43%), Positives = 468/792 (59%), Gaps = 19/792 (2%)
Frame = +3
Query: 120 KELKKRDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILKQEFQGTEKTIALKLQ*LWRD 299
KE K+D+ AL +IQQ + +SIF +I AK+AW L+ FQG+ K I +KLQ L RD
Sbjct: 172 KENTKKDSKALFFIQQAIHESIFSKIAVATTAKEAWTTLETAFQGSSKVITVKLQSLRRD 231
Query: 300 FDNLKMDDRE*VRDFSSRVTEIVNQIKSCGDTIQDKRVVEKVLRCLPPKFDHAAAAIEES 479
F+ L M + E +DF SRV IVNQ++S G+ I D+ VV KVLR L PKFDH A IEES
Sbjct: 232 FETLHMKNGESXQDFLSRVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAXIEES 291
Query: 480 KDLSKMTMYELTGSLLAHEQRINRSAYPSTEQAFQSKQALKSSSSN------RGEFKGGS 641
KDLS + EL GSL +HE R++ + + E+ F +K + RG +GG+
Sbjct: 292 KDLSTYSFDELMGSLQSHEVRLSXTEDKNEEKXFYTKGETSDXKNGGREXTGRGRGRGGA 351
Query: 642 NYRKGNGKWRQNEKTSNWKGKXXXXXXXNPTCVICKKSNHESKDCFFRCKRCKIPNHSQK 821
+ R G G+ R + + + N C CK+ H +C+ + ++ K N+ ++
Sbjct: 352 HGRGGRGRGRGDAQGDQRQSTEKSRNKSNIXCYYCKRFGHVQAECWKKERQEKQANYVEQ 411
Query: 822 DCWFQNXXXXXXXXXXXXXXQSKEEILFYSSANCDSKNMWYLDSGCSNHMTGNRDIFVDL 1001
+ + + Y+ S N+W+LDSGCSNHMTG + +F +L
Sbjct: 412 E------------------EDQVKLFMAYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKEL 453
Query: 1002 NPNITSQIILGDGTQRSAKGKGTIAIQSKDGNKKFITDVLYVPNLSHNLLSVGQLIQKDF 1181
+ + + LGD Q +GKGT+A+ + GN K + +V ++P+L+ L+ G
Sbjct: 454 DESHKLXVKLGDDXQVQVEGKGTVAVNNGHGNVKLLYNVYFIPSLTEKLVKCGATY---- 509
Query: 1182 SVHFDDGTCQILDKKMNDVIASTEME-NNIFPLTMPLNENCALKVENADLSNLWHLRYGH 1358
DKK + +I M N +FPL + E AL V+ SNLWHLRYGH
Sbjct: 510 ------------DKKSDQIIVDVRMAANKLFPLEVSSIEKHALVVKETSESNLWHLRYGH 557
Query: 1359 LNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMHKLPFPKN-SWRAKAPLELVHSDI 1535
LN KGL LL +K+MV LP I +N VCEGCIYGK K PFPK S RA + LE++H+D+
Sbjct: 558 LNVKGLKLLSKKEMVFELPKIDSVN-VCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADL 616
Query: 1536 CGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEAFSTFLQFKVLVERQSGFLIKTLR 1715
CGPMQT + G RYF+LF DD++RM W+YFL K+E F TF +FK VE+QSG IK LR
Sbjct: 617 CGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLR 676
Query: 1716 TDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVAERKNRTIVEMARSMLKGKGLPNL 1895
TDR GEFL N F +C+ G+ R+LT +P+QNGVAERKNRT+VEMARSM+ K L N
Sbjct: 677 TDRXGEFLSNDFKVFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEMARSMMXAKNLSNH 736
Query: 1896 YWAEAVYTAVYILNRSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFD 2075
+WAE V TAVY+LN SPTKAV N+TPYEAWY +KP V H +VFGS+AY S +R K D
Sbjct: 737 FWAEGVATAVYLLNISPTKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYTLXBSHNRSKLD 796
Query: 2076 EKGKKLLFIGYSDESKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQVVDSISYEDPST 2255
EK K +FIGY +SKGY+L +P + K+ +SR+VVFDE A+ W+ + + S
Sbjct: 797 EKSVKCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVFDEKASXTWRVSEDGALVEISSESE 856
Query: 2256 SQASSQVQNIEQDPKVPTP-----------RIGAESDHESPIRRTRSLREIYESSELVLF 2402
S Q Q P PTP ++S E+P R+ RSLR+IYE+++ VLF
Sbjct: 857 MAQSEDQQPSVQIPXSPTPSHSPSSPNLSXSSSSQSSEETPPRKFRSLRDIYETTQ-VLF 915
Query: 2403 TNETQTVQEATQ 2438
+ T +EA +
Sbjct: 916 VADPTTFEEAVE 927
>ref|XP_020867873.1| uncharacterized protein LOC110224828 [Arabidopsis lyrata subsp.
lyrata]
Length = 961
Score = 602 bits (1553), Expect = 0.0
Identities = 323/781 (41%), Positives = 467/781 (59%), Gaps = 14/781 (1%)
Frame = +3
Query: 90 SLEENSVKLQKELKKRDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILKQEFQGTEKTI 269
SL + ++ +KRD AL I QG+ + F ++ AK+AWE L+ ++G ++
Sbjct: 50 SLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVIEATSAKEAWEKLRTSYKGADQVK 109
Query: 270 ALKLQ*LWRDFDNLKMDDRE*VRDFSSRVTEIVNQIKSCGDTIQDKRVVEKVLRCLPPKF 449
++LQ L +F+ L+M + E V D+ SRV + N +K G+ + D R++EKVLR L PKF
Sbjct: 110 KVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDPKF 169
Query: 450 DHAAAAIEESKDLSKMTMYELTGSLLAHEQRINRSAYPSTEQAFQSKQALKSSSSNR--- 620
+H IEE+KDL MT+ +L GSL A+E++ + EQ + + + + N
Sbjct: 170 EHIVTVIEETKDLEAMTIEQLLGSLQAYEEK-KKKKEDIVEQVLKMRITKEENGQNYQRR 228
Query: 621 --GEFKG-GSNYRKGNGKWRQNEKTSNWKGKXXXXXXXNPTCVICKKSNHESKDCFFRCK 791
G+ +G G Y G G WR E +N +G+ + KS ++ +C
Sbjct: 229 GGGQVRGRGRGYGNGRG-WRPYEDNTNQRGENSSRGRGRGS----PKSRYDKSSV--KCY 281
Query: 792 RCKIPNHSQKDCWFQNXXXXXXXXXXXXXXQSKEEILF---YSSANCDSKNMWYLDSGCS 962
C H +C + +E++L Y + + WYLDSG S
Sbjct: 282 NCGKFGHYASECKAPSNKKVEEKANYVEEQVQEEDMLLMASYKKGEHEENHKWYLDSGAS 341
Query: 963 NHMTGNRDIFVDLNPNITSQIILGDGTQRSAKGKGTIAIQSKDGNKKFITDVLYVPNLSH 1142
NHM G++ +FV+L+ ++ + LGD ++ KGKG I I+ K+G+ +FI++V Y+P++
Sbjct: 342 NHMCGSKSMFVELDESVRGNVALGDESKMEVKGKGKILIRLKNGDHQFISNVYYIPSMKT 401
Query: 1143 NLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIASTEMENNIFPLTMPLNENCALKVENA 1322
N+LS+GQL++K + + D I D++ N + + +N +F L + + LK+
Sbjct: 402 NILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVSMSKNRMFVLNIRNDIAQCLKMCYK 461
Query: 1323 DLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMHKLPFPK-NSWR 1499
+ S LWHLR+GHLN GL LL +K+MV GLP I NQVCEGC+ GK K+ FPK +S R
Sbjct: 462 EESWLWHLRFGHLNFGGLKLLSKKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSTR 521
Query: 1500 AKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEAFSTFLQFKVLV 1679
A+ PLEL+H+D+CGP++ + G YF+LFIDD++R W+YFL +KSE F F +FK V
Sbjct: 522 AQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKRFKAHV 581
Query: 1680 ERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVAERKNRTIVEMA 1859
E++SG IK++R+DRGGEF F++YC+ NGI+RQLTV R+PQQNGVAERKNRTI+EMA
Sbjct: 582 EKESGLTIKSMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMA 641
Query: 1860 RSMLKGKGLPNLYWAEAVYTAVYILNRSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAY 2039
RSMLK K LP WAEAV AVY+LNRSPTK++ KTP EAW +KP V H RVFGSIA+
Sbjct: 642 RSMLKSKRLPKELWAEAVAYAVYLLNRSPTKSISGKTPQEAWSGRKPGVSHLRVFGSIAH 701
Query: 2040 AHIPSQSREKFDEKGKKLLFIGYSDESKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQ 2219
AH+P + R K D+K +K +FIGY + SKGY+L +P+T K ISR+VVFDE WDWK +
Sbjct: 702 AHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNVVFDEEEEWDWKSNE 761
Query: 2220 ----VVDSISYEDPSTSQASSQVQNIEQDPKVPTPRIGAESDHESPIRRTRSLREIYESS 2387
+D ++ + P PT G ES E + RSL+E+YE +
Sbjct: 762 DDYNFFPHFEEDDSELTRDEPPREEPTTPPTSPTSSQGEESSSERTL-HFRSLQELYEVT 820
Query: 2388 E 2390
E
Sbjct: 821 E 821
>gb|KYP39385.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 723
Score = 594 bits (1531), Expect = 0.0
Identities = 320/717 (44%), Positives = 455/717 (63%), Gaps = 8/717 (1%)
Frame = +3
Query: 84 SMSLEENSVKLQKELKKRDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILKQEFQGTEK 263
+++L E K ++ +++DA AL +QQ VG++I RI AK AW+IL++EF+G E+
Sbjct: 25 TITLSEEKQKKLEDCEQKDAQALFVLQQAVGETIARRIMDTDTAKKAWDILEEEFEGNEQ 84
Query: 264 TIALKLQ*LWRDFDNLKMDDRE*VRDFSSRVTEIVNQIKSCGDTIQDKRVVEKVLRCLPP 443
+KL L R+ + +KM + E + ++ R+ EIVN++K G+ +KRVVEK+L L
Sbjct: 85 VRFVKLHYLRREIETIKMKESETIEEYYGRIKEIVNKMKLYGN---EKRVVEKILITLTE 141
Query: 444 KFDHAAAAIEESKDLSKMTMYELTGSLLAHEQRIN-RSAYPSTEQAFQSKQALKSSSSNR 620
K+D A+IE S D S + + +L G L AHE R+N R S + FQSK L+S R
Sbjct: 142 KYDSIVASIETSSDPSSLPVNKLIGLLGAHEARLNSRVNTDSVKNEFQSKLKLQS----R 197
Query: 621 GEFKGGSNYRKGNGKWRQNEKTSNWKGKXXXXXXXNPTCVICKKSNHESKDCFFRCKR-- 794
+ GG +K G+ +N+ N+ +C IC KS H KDC+ R K
Sbjct: 198 NKEDGG---KKNVGECSRNKYFRNFSRNKKDKYS---SCGICNKSGHAQKDCWHRGKPIR 251
Query: 795 --CKIPNHSQKDCWFQNXXXXXXXXXXXXXXQSKEEILFYSSANCDS-KNMWYLDSGCSN 965
C P H +K C +N +++E+ LFY++ S + WYLDSGCSN
Sbjct: 252 HYCNKPGHVEKYCRNKNKHQANFAKE-----RNQEKHLFYANQESPSIEESWYLDSGCSN 306
Query: 966 HMTGNRDIFVDLNPNITSQIILGDGTQRSAKGKGTIAIQSKDGNKKFITDVLYVPNLSHN 1145
HM ++ IF D++ ++ ++ LG+ T ++GKGT+ +++K G + I D+L VPNL N
Sbjct: 307 HMANDQSIFKDIDNSVKVKVRLGNDTMVESQGKGTVMVETKKGTR-LIKDILLVPNLKEN 365
Query: 1146 LLSVGQLIQKDFSVHFDDGTCQILDKKMNDV-IASTEMENNIFPLTMPLNENCALKVENA 1322
LLS+GQ ++ +S+ F+ C+I D K V E N FP++ N A+K+E
Sbjct: 366 LLSIGQKMENRYSLLFERDICKIYDSKRLKVGQVKMEKRNKSFPISFKPGTNIAMKIE-V 424
Query: 1323 DLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMHKLPFPKN-SWR 1499
D S LWH R+GH N L LL +K M+ LP +++ N+ CEGC+ GK H+LPF + +WR
Sbjct: 425 DDSWLWHRRFGHFNIHALKLLHQKGMMRDLPTLKENNEACEGCLLGKQHRLPFSTSKAWR 484
Query: 1500 AKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEAFSTFLQFKVLV 1679
AK LEL+H+D+CGPM+TP+ N RYFILFIDD+++M W+YFL KSE F F +FK LV
Sbjct: 485 AKNLLELIHTDVCGPMRTPSHTNNRYFILFIDDFSKMTWVYFLKTKSEVFGIFKKFKALV 544
Query: 1680 ERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVAERKNRTIVEMA 1859
E+QSG IK R+DRG E+ F ++C+ GI++QLTV+ TPQ+NGV+ERKNRT++EMA
Sbjct: 545 EKQSGKQIKVFRSDRGKEYTSREFDKFCEDEGIEQQLTVAYTPQKNGVSERKNRTVMEMA 604
Query: 1860 RSMLKGKGLPNLYWAEAVYTAVYILNRSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAY 2039
RSMLK KGLPN +WAEAVYTAVY+LNR PTKAVQ+KTP EAW QKP H RVFGSI Y
Sbjct: 605 RSMLKEKGLPNTFWAEAVYTAVYLLNRCPTKAVQDKTPIEAWSGQKPSTKHLRVFGSICY 664
Query: 2040 AHIPSQSREKFDEKGKKLLFIGYSDESKGYRLLDPNTNKVTISRDVVFDETATWDWK 2210
H+ + R K ++K + +F+GY+ +SKGYR+ + T K+TISRD+ D ATW+W+
Sbjct: 665 IHVLDEKRHKLEDKTVRGIFLGYNSQSKGYRVYNLQTKKLTISRDIEVDGNATWNWE 721
>gb|KYP38573.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1120
Score = 605 bits (1559), Expect = 0.0
Identities = 333/771 (43%), Positives = 476/771 (61%), Gaps = 11/771 (1%)
Frame = +3
Query: 120 KELKKRDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILKQEFQGTEKTIALKLQ*LWRD 299
++ +++DA AL +QQ VG++I RI V AK AW+IL++EF+G E+ ++KL L R+
Sbjct: 3 EDCEQKDAQALFVLQQAVGETIARRIMDVDTAKKAWDILEEEFEGNEQVRSVKLHYLRRE 62
Query: 300 FDNLKMDDRE*VRDFSSRVTEIVNQIKSCGDTIQDKRVVEKVLRCLPPKFDHAAAAIEES 479
F+ +KM + E + ++ R+ EI+N++K G I++KRVVEK +D A+IE S
Sbjct: 63 FETIKMKESETIEEYYGRIKEIINKMKLYGKEIKEKRVVEK--------YDSIVASIETS 114
Query: 480 KDLSKMTMYELTGSLLAHEQRINRSAYP-STEQAFQSKQALKSSSSNRGEFKGGSNYRKG 656
D S +++ +L G L AH+ R+N S E AFQSK L+S R + GG +K
Sbjct: 115 SDPSSLSVNKLIGLLKAHKARLNSCVDTNSNENAFQSKLKLQS----RNKEDGG---KKN 167
Query: 657 NGKWRQNEKTSNWKGKXXXXXXXNPTCVICKKSNHESKDCFFRCKRCKIPNHSQKDCWFQ 836
GK+ +N+ + N+ G KD + C C P H++KDCW +
Sbjct: 168 AGKYSRNKDSRNFSGN--------------------KKDKYPLCGICNKPGHAEKDCWHR 207
Query: 837 NXXXXXXXXXXXXXXQSKEEILFYSSAN-CDSKN-MWYLDSGCSNHMTGNRDIFVDLNPN 1010
++E+ LFY++ CD+ + WYLDSGCSNHM +++IF D++ +
Sbjct: 208 ---------ANFVEEHNQEQRLFYANQEFCDNGDGSWYLDSGCSNHMAKDQNIFKDIDNS 258
Query: 1011 ITSQIILGDGTQRSAKGKGTIAIQSKDGNKKFITDVLYVPNLSHNLLSVGQLIQKDFSVH 1190
+ ++ LG+GT ++GKGT+ +++K G + I DVL VPNL NLLS+GQ+++ +S+H
Sbjct: 259 VKVKVRLGNGTMVESQGKGTVVVETKKGTR-LIKDVLLVPNLKENLLSIGQMMENGYSLH 317
Query: 1191 FDDGTCQILDKKMNDV-IASTEMENNIFPLTMPLNENCALKVENADLSNLWHLRYGHLNS 1367
F+ C+I D K ++ E N IFPL+ N A+ VE D S LWH R+GH N
Sbjct: 318 FERDICKIYDSKRVEIGQVKMEKRNRIFPLSFNRGTNIAMNVE-VDDSWLWHRRFGHFNI 376
Query: 1368 KGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMHKLPFPKN-SWRAKAPLELVHSDICGP 1544
L LL +K M+ LP +++ N+ CEGC+ GK H+ F + +WRAK LEL+H+++CGP
Sbjct: 377 HALKLLHQKGMMRDLPSLKENNEACEGCLLGKQHRSSFSTSKAWRAKDLLELIHTNVCGP 436
Query: 1545 MQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEAFSTFLQFKVLVERQSGFLIKTLRTDR 1724
M+TP+ N RYFILFI D++RM W+YFL KSE F F +FK LVE+QSG IK LR+DR
Sbjct: 437 MRTPSHTNNRYFILFIYDFSRMTWVYFLKTKSEVFGIFKKFKALVEKQSGKQIKVLRSDR 496
Query: 1725 GGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVAERKNRTIVEMARSMLKGKGLPNLYWA 1904
G E+ F ++C+ GI+RQLTV+ TPQQNGV ERKNR ++EM RSMLK KGLPN++WA
Sbjct: 497 GKEYTSCEFDKFCEDEGIERQLTVAYTPQQNGVLERKNRIVMEMERSMLKEKGLPNIFWA 556
Query: 1905 EAVYTAVYILNRSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKG 2084
EAVYT VY+LNR PT A + TP E+ KP H RVFGSI Y H+P + R K ++K
Sbjct: 557 EAVYTVVYLLNRFPTNAFRENTPIESCSGNKPATKHLRVFGSICYIHVPDEKRHKLEDKT 616
Query: 2085 KKLLFIGYSDESKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQVVDSISY---EDPST 2255
+ +F+GYS +SKGYR+ + T K+TISRD+ DE ATW+W+ K++ Y P+T
Sbjct: 617 VRGIFLGYSSQSKGYRVYNLQTKKLTISRDIEVDENATWNWEEKRIEKKTIYMPINQPTT 676
Query: 2256 SQASSQVQNIEQDPKVPTPRI---GAESDHESPIRRTRSLREIYESSELVL 2399
S Q+I P+ +PRI ES ES RR RSL +IYE+ L +
Sbjct: 677 SSLEDNNQDIVISPE--SPRIVPQQEESSPESTPRRVRSLVDIYETCNLAI 725
>gb|KZV32174.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dorcoceras hygrometricum]
Length = 699
Score = 583 bits (1504), Expect = 0.0
Identities = 318/722 (44%), Positives = 431/722 (59%), Gaps = 34/722 (4%)
Frame = +3
Query: 375 IKSCGDTIQDKRVVEKVLRCLPPKFDHAAAAIEESKDLSKMTMYELTGSLLAHEQRINRS 554
+KS G+ I D VV K+LR L P+FDH AAIEESKDLS T+ EL GSL AHE R+NRS
Sbjct: 1 MKSYGENINDGTVVAKILRSLTPRFDHVVAAIEESKDLSVFTVDELMGSLQAHEDRLNRS 60
Query: 555 AYPSTEQAFQSKQALKSSSSNRGEFKGGSNYRKGNGKWRQNEKTSNWKGKXXXXXXXNPT 734
S E+AF A++ S+ + G S+ +G G R + +W +
Sbjct: 61 QEKSEEKAF----AIRDSTQDEGRNNSSSSRGRGRGISRGRGRGKSWVEQRK-------- 108
Query: 735 CVICKKSNHESKDCFFRCKRCKIPNHSQKDCWFQNXXXXXXXXXXXXXXQSKEEILFYS- 911
C C K H +KDC R + + ++ ++E+ LF +
Sbjct: 109 CYTCGKPGHLAKDC--RSSQAEFAEETEA---------------------TEEDFLFMAL 145
Query: 912 -SANCDSKNMWYLDSGCSNHMTGNRDIFVDLNPNITSQIILGDGTQRSAKGKGTIAIQSK 1088
D + +W++DSGCSNHMTG +++F +L+ I LG+ Q +GKGT+ +QS
Sbjct: 146 MEHGKDEQVVWFIDSGCSNHMTGMKEMFRELDETQRRVIRLGNNKQIQVEGKGTVEVQSV 205
Query: 1089 DGNKKFITDVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIASTEM-ENN 1265
G K I++VLY P L+HNL SVGQL+ F++ FD+ C I +K V+A M EN+
Sbjct: 206 FGKSKLISNVLYTPELAHNLFSVGQLLLSGFTILFDESHCIITEKATGHVLAKVNMAENH 265
Query: 1266 IFPLTMPLNENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCE 1445
+FPL E+ A+ + S LWHLRYGHL++ GL LL +K+MV GLP I VCE
Sbjct: 266 MFPLVFSKLESHAMVTMTKNASQLWHLRYGHLHTAGLRLLNQKEMVRGLPRIDVDGAVCE 325
Query: 1446 GCIYGKMHKLPFPKN-SWRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIY 1622
GC+YGK K FP SWRA PLELVH+D+CGPM+T T G +YF+LF+DDY+RM W+Y
Sbjct: 326 GCMYGKQSKRSFPVGQSWRATEPLELVHADLCGPMRTETLGGSKYFLLFVDDYSRMSWVY 385
Query: 1623 FLNQKSEAFSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSR 1802
FL KSEAF F +FK LVE+Q G +K LRTDRGGEF F +YC+ +GI ++LT
Sbjct: 386 FLKFKSEAFGQFFKFKALVEKQKGSNLKILRTDRGGEFTSMEFNQYCEKHGIHKELTAPY 445
Query: 1803 TPQQNGVAERKNRTIVEMARSMLKGKGLPNLYWAEAVYTAVYILNRSPTKAVQNKTPYEA 1982
TP+QNGVAERKNRTIVEMARSMLK KGLP +WAEAV TAVY++N SPTKAV NKTPYEA
Sbjct: 446 TPEQNGVAERKNRTIVEMARSMLKSKGLPYNFWAEAVTTAVYLINLSPTKAVMNKTPYEA 505
Query: 1983 WYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDESKGYRLLDPNTNKVT 2162
W ++P V+H ++FG I Y I + R K +EK K +FIGY +SK YR+ +P T KV
Sbjct: 506 WSGKRPSVEHLKIFGCIVYVLINANERHKLEEKSIKCIFIGYCSQSKAYRVYNPATGKVI 565
Query: 2163 ISRDVVFDETATWDWKGKQVVDSISYEDP-------STSQASSQV-----QNIEQDPKVP 2306
+SR+ VF+E +W W+ + + +ED +TS+++S + ++ +
Sbjct: 566 VSRNTVFNEEDSWQWEDNRKAPAFQFEDDNRETRRMTTSESNSSLSPDGSNSVSRSSPTI 625
Query: 2307 TPRIGAES------------------DHESPIRRTRSLREIYESSELVLFTNETQTVQEA 2432
+ G+ S D E+P R+ RSLREIYES L L+ ++ T +EA
Sbjct: 626 STHQGSSSNSFNSGACSAEGDTDNDGDSETPPRKVRSLREIYESCTLALYASDPSTYEEA 685
Query: 2433 TQ 2438
+
Sbjct: 686 AE 687
>ref|XP_022876705.1| uncharacterized protein LOC111394888 [Olea europaea var. sylvestris]
Length = 750
Score = 579 bits (1493), Expect = 0.0
Identities = 301/454 (66%), Positives = 338/454 (74%), Gaps = 4/454 (0%)
Frame = +3
Query: 99 ENSVKLQKELKKRDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILKQEFQGTEKTIALK 278
E+ KLQKE K++DAMALRYIQQGVGKSIFPRIFGVKKAKDAWEIL QEFQG EK IALK
Sbjct: 58 EDYEKLQKEFKRKDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILMQEFQGMEKMIALK 117
Query: 279 LQ*LWRDFDNLKMDDRE*VRDFSSRVTEIVNQIKSCGDTIQDKRVVEKVLRCLPPKFDHA 458
LQ LW DFDNL+M++RE VR FSSRV E VNQIKSCGDTI DKRVVEK+LRCLPPKFDH
Sbjct: 118 LQSLWTDFDNLQMEERESVRVFSSRVAETVNQIKSCGDTITDKRVVEKMLRCLPPKFDHV 177
Query: 459 AAAIEESKDLSKMTMYELTGSLLAHEQRINRSAYPS-TEQAFQSKQALKSSSSNRGEFKG 635
AAAIEESKDLSKMT+YELTGSLLAHEQRINRS+ S TEQAFQSKQ K S+N GE
Sbjct: 178 AAAIEESKDLSKMTIYELTGSLLAHEQRINRSSNQSTTEQAFQSKQTSKGGSNNYGEHNR 237
Query: 636 GSNYRK-GNGKWRQNEKTSNWKGK-XXXXXXXNPTCVICKKSNHESKDCFFRCKRCKIPN 809
GSN K + W++ +K S WKGK NPTC+ICKK NHESK+C+FRCKRCKIPN
Sbjct: 238 GSNQTKQKDSYWKKGDKQSKWKGKQTQISGGNNPTCIICKKMNHESKECYFRCKRCKIPN 297
Query: 810 HSQKDCWFQNXXXXXXXXXXXXXXQSKEEILFYS-SANCDSKNMWYLDSGCSNHMTGNRD 986
HSQ+DCWFQN ++++EILFYS + +++ WYLDSGCSNHMTGNRD
Sbjct: 298 HSQRDCWFQNKEMTERKSAANFSQENEKEILFYSQNYENGAQSPWYLDSGCSNHMTGNRD 357
Query: 987 IFVDLNPNITSQIILGDGTQRSAKGKGTIAIQSKDGNKKFITDVLYVPNLSHNLLSVGQL 1166
IFVDLNPNITSQ+ILGDGT R A GKGTIA+Q K+GNKK ITDVLYVPNLSHNLLSVGQL
Sbjct: 358 IFVDLNPNITSQVILGDGTCRDAVGKGTIAVQIKEGNKKLITDVLYVPNLSHNLLSVGQL 417
Query: 1167 IQKDFSVHFDDGTCQILDKKMNDVIASTEMENNIFPLTMPLNENCALKVENADLSNLWHL 1346
IQ DFSVHFDDG C K + DL LWHL
Sbjct: 418 IQSDFSVHFDDGAC---------------------------------KARDEDLVYLWHL 444
Query: 1347 RYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEG 1448
RYGHL+ +GL LL+ K MV GLP+IQ I+++ G
Sbjct: 445 RYGHLHERGLRLLQMKNMVTGLPNIQHIDKIKNG 478
Score = 338 bits (868), Expect = e-101
Identities = 172/227 (75%), Positives = 195/227 (85%), Gaps = 3/227 (1%)
Frame = +3
Query: 1770 NGIKRQLTVSRTPQQNGVAERKNRTIVEMARSMLKGKGLPNLYWAEAVYTAVYILNRSPT 1949
NGIKRQLTVSRTPQQNGVAERKNRTIVEMARSMLKGKGLPNLYWAEAV TAVYILNRSPT
Sbjct: 477 NGIKRQLTVSRTPQQNGVAERKNRTIVEMARSMLKGKGLPNLYWAEAVNTAVYILNRSPT 536
Query: 1950 KAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDESKGY 2129
KAV+NKTPYEAW K+KP VDHF++FGSIAYA IPSQ+REKFDEKG+KL+F+G SDESKGY
Sbjct: 537 KAVRNKTPYEAWNKKKPMVDHFKIFGSIAYALIPSQNREKFDEKGQKLVFVGSSDESKGY 596
Query: 2130 RLLDPNTNKVTISRDVVFDETATWDWKGKQVVDSISYE--DPSTSQAS-SQVQNIEQDPK 2300
LLDP TNK+T+SRDVVFDE A+WDWKGK+VVD Y DP T QA SQV N+E +P
Sbjct: 597 WLLDPTTNKITVSRDVVFDEAASWDWKGKEVVDQTPYHFVDPLTFQAGPSQVGNLEHNPN 656
Query: 2301 VPTPRIGAESDHESPIRRTRSLREIYESSELVLFTNETQTVQEATQD 2441
PTPR ESD ESP R+TRSL++IYES EL LF+ E Q+ +EA+++
Sbjct: 657 -PTPRSEEESDPESPPRKTRSLQDIYESCELGLFSREPQSFEEASKE 702
>gb|AIC77183.1| polyprotein [Gossypium barbadense]
Length = 1369
Score = 597 bits (1540), Expect = 0.0
Identities = 332/800 (41%), Positives = 470/800 (58%), Gaps = 31/800 (3%)
Frame = +3
Query: 90 SLEENSVKLQKELKKRDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILKQEFQGTEKTI 269
+L ++ K +E +K+D AL I QG+ +S F +I VK AK+AWEIL++ FQG EK
Sbjct: 52 ALSNDAKKALREARKKDQKALNSIFQGMDESTFEKISDVKNAKNAWEILQKSFQGVEKAK 111
Query: 270 ALKLQ*LWRDFDNLKMDDRE*VRDFSSRVTEIVNQIKSCGDTIQDKRVVEKVLRCLPPKF 449
++LQ L +F+ LKM E + D+++RV +VN++K G+T+ + RV+EK+LR L KF
Sbjct: 112 KVRLQSLRAEFEMLKMKSSENIDDYANRVKSVVNEMKRNGETLDEVRVMEKILRSLTRKF 171
Query: 450 DHAAAAIEESKDLSKMTMYELTGSLLAHEQRINRSA-YPSTEQAFQSKQALKSSSSN--- 617
++ AIEESKDLSKM++ EL GSL AHEQ++ + + QA SK ++ ++
Sbjct: 172 EYVVVAIEESKDLSKMSLEELVGSLQAHEQKMKLNEDSENLNQALHSKLSIDDGETSNNF 231
Query: 618 ----------RGEFKGGSNYRKGN--------GKWRQNE--KTSNWKGKXXXXXXXNPTC 737
RG ++GG+ +G+ G++++N+ +TSN +G+
Sbjct: 232 SQGRGNRRGYRGGYRGGNRGGRGSRGRGNQSYGRYQENKDYQTSN-RGRGSRGRG----- 285
Query: 738 VICKKSNHESKDCFFRCKRCKIPNHSQKDCWFQNXXXXXXXXXXXXXXQSKEE---ILFY 908
+ + +C C H +C + K E L Y
Sbjct: 286 ----RGRFQENKSQVQCYNCNKYGHFSYECRSTHKVDERNHVAVAAEGNEKVESSVFLTY 341
Query: 909 SSANCDSKNMWYLDSGCSNHMTGNRDIFVDLNPNITSQIILGDGTQRSAKGKGTIAIQSK 1088
+++WYLD+G SNHM G +++F +L+ + QI GD + KGKG + I +
Sbjct: 342 GENEDRKRSVWYLDNGASNHMCGRKELFTELDETVHGQITFGDNSHAEIKGKGKVVITQR 401
Query: 1089 DGNKKFITDVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIASTEMENNI 1268
+G KK+I+DV YVP L NL+S+GQL++K + VH D + I +K V+ N +
Sbjct: 402 NGEKKYISDVYYVPALKSNLISLGQLLEKGYEVHMKDRSLAIRNKSGELVVRVDMTRNRL 461
Query: 1269 FPLTMPLNENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEG 1448
F L + E +K + + S LWHLRYGHL GL LL + MV GLP I +Q+CE
Sbjct: 462 FTLDIESGEVKCMKTDLKNESWLWHLRYGHLGFSGLKLLSKTNMVNGLPSINHPDQLCEA 521
Query: 1449 CIYGKMHKLPFPKN-SWRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYF 1625
C+ GK H+ F S RA+ PLE+VH+DI GP + G RY++ FIDDY+R W+YF
Sbjct: 522 CVKGKQHRQKFEVGKSRRARRPLEIVHTDISGPYDIESLGGNRYYLTFIDDYSRKCWVYF 581
Query: 1626 LNQKSEAFSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRT 1805
L KSEA F +FK +VE+QSG +K LR+DRGGE+ + +CK +GI QLT RT
Sbjct: 582 LKAKSEALEKFKEFKAMVEKQSGRYLKILRSDRGGEYTAKLYESFCKDHGIIHQLTARRT 641
Query: 1806 PQQNGVAERKNRTIVEMARSMLKGKGLPNLYWAEAVYTAVYILNRSPTKAVQNKTPYEAW 1985
PQQNGVAERKNRTI++MARSM+KGK LP +WAEAV AVY+LN+ PTK+V++KTP EAW
Sbjct: 642 PQQNGVAERKNRTILDMARSMIKGKHLPRTFWAEAVECAVYLLNQCPTKSVRHKTPEEAW 701
Query: 1986 YKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDESKGYRLLDPNTNKVTI 2165
KP+V H ++FG IAYAH+P Q R+K D++G+K +FIGY SK YRL +P T K+ I
Sbjct: 702 SGHKPRVGHLKIFGCIAYAHVPEQQRKKLDDRGEKCIFIGYDKRSKAYRLYNPLTKKLII 761
Query: 2166 SRDVVFDETATWDW--KGKQVVDSISYEDPSTSQASSQVQNI-EQDPKVPTPRIGAESDH 2336
SRDV FDE W W + K+V ED + + Q+ P PT G+ S
Sbjct: 762 SRDVEFDEADYWRWSEEEKKVEGLFFNEDDNNQEEQGDDQSPGTTAPSSPTSSSGSSSLD 821
Query: 2337 ESPIRRTRSLREIYESSELV 2396
E+P RTRSL +IY S+E V
Sbjct: 822 EAP-TRTRSLNDIYNSTEPV 840
>gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1331
Score = 594 bits (1531), Expect = 0.0
Identities = 326/787 (41%), Positives = 458/787 (58%), Gaps = 20/787 (2%)
Frame = +3
Query: 90 SLEENSVKLQKELKKRDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILKQEFQGTEKTI 269
SL + ++ +KRD AL I QG+ + F +I GVK AK+AWE LK ++G ++
Sbjct: 39 SLSQAQKDSLRDSRKRDKKALCLIYQGLDEDTFEKISGVKTAKEAWEKLKISYKGADQVK 98
Query: 270 ALKLQ*LWRDFDNLKMDDRE*VRDFSSRVTEIVNQIKSCGDTIQDKRVVEKVLRCLPPKF 449
++LQ L +F+ L M + E V D+ SRV + N +K G+ + D R++EK+LR L PKF
Sbjct: 99 KVRLQTLRGEFEALHMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKILRSLDPKF 158
Query: 450 DHAAAAIEESKDLSKMTMYELTGSLLAHEQRINRSAYPSTEQAFQS-----------KQA 596
+H EE+KDL M++ +L GSL A+E++ + EQ F++ Q+
Sbjct: 159 EHIVTITEETKDLEAMSIEQLLGSLQAYEEK-KKKKEEIVEQVFKAHVDSRKEENAHNQS 217
Query: 597 LKSSSSN--RGEFKGGSNYRKGNGKWRQNEKTSNWKGKXXXXXXXNPT---CVICKKSNH 761
+S S RG G R+ N ++ E ++ +G+ + + C C K H
Sbjct: 218 RRSYSQEQGRGRAYGHGQGRRPNNNNQRGESSNRGRGRGNPNSRYDKSRIKCYNCNKFGH 277
Query: 762 ESKDCFFRCKRCKIPNHSQKDCWFQNXXXXXXXXXXXXXXQSKEEILFYSSANCDSKNMW 941
+ +C + PN +N + +L Y + N W
Sbjct: 278 YASEC-------RAPN--------KNKVEEKANYAEERCQEDGTLLLAYKGQDKGEDNQW 322
Query: 942 YLDSGCSNHMTGNRDIFVDLNPNITSQIILGDGTQRSAKGKGTIAIQSKDGNKKFITDVL 1121
YLDSG SNHM G R +FV+L+ ++ + GD ++ + +GKG + IQ K+G +FI+++
Sbjct: 323 YLDSGASNHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNVLIQLKNGEHQFISNIY 382
Query: 1122 YVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIASTEMENNIFPLTMPLNENC 1301
YVP++ N+LS+GQL++K + + + I D + M N +F L + +
Sbjct: 383 YVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRDNTSRFITKVPMMRNRMFVLNIQSDGPQ 442
Query: 1302 ALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMHKLPF 1481
LK+ D S LWHLR+GHLN KGL LL +K MV GLP I NQVCEGC+ GK +L F
Sbjct: 443 CLKMCYKDQSWLWHLRFGHLNFKGLDLLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSF 502
Query: 1482 PKNS-WRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEAFSTF 1658
PK S RA+ PLEL+H+D+CGP++ + G YF+LFIDD++R W+YFL +KSE F F
Sbjct: 503 PKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENF 562
Query: 1659 LQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVAERKN 1838
+FK VE++SG LIK LR+DRGGEF F +YC+ NGI+RQLTV R+PQQNGVAERKN
Sbjct: 563 KKFKAHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKN 622
Query: 1839 RTIVEMARSMLKGKGLPNLYWAEAVYTAVYILNRSPTKAVQNKTPYEAWYKQKPKVDHFR 2018
RTI+EMARSMLK K LP +WAEAV AVY+ NRSPT++V KTP EAW +KP + H R
Sbjct: 623 RTILEMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLR 682
Query: 2019 VFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDESKGYRLLDPNTNKVTISRDVVFDETAT 2198
VFGSIA+ H+P + R K D+K +K +FIGY SKGY+L +P++ K ISR+VVFDE
Sbjct: 683 VFGSIAHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDEEGE 742
Query: 2199 WDWKGKQVVDSISYEDPSTSQASSQVQNIEQDPKVPTPRIGAESDHESP---IRRTRSLR 2369
WDW D + Q Q E PT D+ES + R RSL+
Sbjct: 743 WDW-STNCEDHTFFPCVEEDDVEQQQQPQETPTTPPTSPNTTLQDYESSSERMPRFRSLQ 801
Query: 2370 EIYESSE 2390
EIYE++E
Sbjct: 802 EIYEATE 808
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 592 bits (1527), Expect = 0.0
Identities = 321/783 (40%), Positives = 465/783 (59%), Gaps = 16/783 (2%)
Frame = +3
Query: 90 SLEENSVKLQKELKKRDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILKQEFQGTEKTI 269
SL + ++ +KRD AL I QG+ + F ++ AK+AWE L+ ++G ++
Sbjct: 50 SLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVK 109
Query: 270 ALKLQ*LWRDFDNLKMDDRE*VRDFSSRVTEIVNQIKSCGDTIQDKRVVEKVLRCLPPKF 449
++LQ L +F+ L+M + E V D+ SRV + N +K G+ + D R++EKVLR L KF
Sbjct: 110 KVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKF 169
Query: 450 DHAAAAIEESKDLSKMTMYELTGSLLAHEQRINRSAYPSTEQAFQSKQALKSSSSNRGEF 629
+H IEE+KDL MT+ +L GSL A+E++ + EQ + Q K + +
Sbjct: 170 EHIVTVIEETKDLEAMTIEQLLGSLQAYEEK-KKKKEDIAEQVL-NMQITKEENGQSYQR 227
Query: 630 KGGSNYRK------GNGK-WRQNEKTSNWKGKXXXXXXXNPTCVICKKSNHESKDCFFRC 788
+GG R GNG+ WR +E +N +G+ KS ++ +C
Sbjct: 228 RGGGQVRGRGRGGYGNGRGWRPHEDNTNQRGENSSRGRGKGH----PKSRYDKSSV--KC 281
Query: 789 KRCKIPNHSQKDCWFQNXXXXXXXXXXXXXXQSKEEILFYSSANCDSK---NMWYLDSGC 959
C H +C + +E++L +S D + + WYLDSG
Sbjct: 282 YNCGKFGHYASECKAPSNKKFEEKAHYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGA 341
Query: 960 SNHMTGNRDIFVDLNPNITSQIILGDGTQRSAKGKGTIAIQSKDGNKKFITDVLYVPNLS 1139
SNHM G + +F +L+ ++ + LGD ++ KGKG I I+ K+G+ +FI++V Y+P++
Sbjct: 342 SNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMK 401
Query: 1140 HNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIASTEMENNIFPLTMPLNENCALKVEN 1319
N+LS+GQL++K + + D I D++ N + +N +F L + + LK+
Sbjct: 402 TNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCY 461
Query: 1320 ADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMHKLPFPK-NSW 1496
+ S LWHLR+GHLN GL LL K+MV GLP I NQVCEGC+ GK K+ FPK +S
Sbjct: 462 KEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSS 521
Query: 1497 RAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEAFSTFLQFKVL 1676
RA+ PLEL+H+D+CGP++ + G YF+LFIDD++R W+YFL +KSE F F +FK
Sbjct: 522 RAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAH 581
Query: 1677 VERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVAERKNRTIVEM 1856
VE++SG +IKT+R+DRGGEF F++YC+ NGI+RQLTV R+PQQNGV ERKNRTI+EM
Sbjct: 582 VEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEM 641
Query: 1857 ARSMLKGKGLPNLYWAEAVYTAVYILNRSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIA 2036
ARSMLK K LP WAEAV AVY+LNRSPTK+V KTP EAW +KP V H RVFGSIA
Sbjct: 642 ARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIA 701
Query: 2037 YAHIPSQSREKFDEKGKKLLFIGYSDESKGYRLLDPNTNKVTISRDVVFDETATWDWKGK 2216
+AH+P + R K D+K +K +FIGY + SKGY+L +P+T K ISR++VFDE WDW
Sbjct: 702 HAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSN 761
Query: 2217 Q----VVDSISYEDPSTSQASSQVQNIEQDPKVPT-PRIGAESDHESPIRRTRSLREIYE 2381
+ ++P ++ + P PT +I S +P R RS++E+YE
Sbjct: 762 EEDYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTP--RFRSIQELYE 819
Query: 2382 SSE 2390
+E
Sbjct: 820 VTE 822
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 592 bits (1527), Expect = 0.0
Identities = 321/783 (40%), Positives = 465/783 (59%), Gaps = 16/783 (2%)
Frame = +3
Query: 90 SLEENSVKLQKELKKRDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILKQEFQGTEKTI 269
SL + ++ +KRD AL I QG+ + F ++ AK+AWE L+ ++G ++
Sbjct: 50 SLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVK 109
Query: 270 ALKLQ*LWRDFDNLKMDDRE*VRDFSSRVTEIVNQIKSCGDTIQDKRVVEKVLRCLPPKF 449
++LQ L +F+ L+M + E V D+ SRV + N +K G+ + D R++EKVLR L KF
Sbjct: 110 KVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKF 169
Query: 450 DHAAAAIEESKDLSKMTMYELTGSLLAHEQRINRSAYPSTEQAFQSKQALKSSSSNRGEF 629
+H IEE+KDL MT+ +L GSL A+E++ + EQ + Q K + +
Sbjct: 170 EHIVTVIEETKDLEAMTIEQLLGSLQAYEEK-KKKKEDIVEQVL-NMQITKEENGQSYQR 227
Query: 630 KGGSNYRK------GNGK-WRQNEKTSNWKGKXXXXXXXNPTCVICKKSNHESKDCFFRC 788
+GG R GNG+ WR +E +N +G+ KS ++ +C
Sbjct: 228 RGGGQVRGRGRGGYGNGRGWRPHEDNTNQRGENSSRGRGKGH----PKSRYDKSSV--KC 281
Query: 789 KRCKIPNHSQKDCWFQNXXXXXXXXXXXXXXQSKEEILFYSSANCDSK---NMWYLDSGC 959
C H +C + +E++L +S D + + WYLDSG
Sbjct: 282 YNCGKFGHYASECKAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGA 341
Query: 960 SNHMTGNRDIFVDLNPNITSQIILGDGTQRSAKGKGTIAIQSKDGNKKFITDVLYVPNLS 1139
SNHM G + +F +L+ ++ + LGD ++ KGKG I I+ K+G+ +FI++V Y+P++
Sbjct: 342 SNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMK 401
Query: 1140 HNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIASTEMENNIFPLTMPLNENCALKVEN 1319
N+LS+GQL++K + + D I D++ N + +N +F L + + LK+
Sbjct: 402 TNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCY 461
Query: 1320 ADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMHKLPFPK-NSW 1496
+ S LWHLR+GHLN GL LL K+MV GLP I NQVCEGC+ GK K+ FPK +S
Sbjct: 462 KEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSS 521
Query: 1497 RAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEAFSTFLQFKVL 1676
RA+ PLEL+H+D+CGP++ + G YF+LFIDD++R W+YFL +KSE F F +FK
Sbjct: 522 RAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAH 581
Query: 1677 VERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVAERKNRTIVEM 1856
VE++SG +IKT+R+DRGGEF F++YC+ NGI+RQLTV R+PQQNGV ERKNRTI+EM
Sbjct: 582 VEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEM 641
Query: 1857 ARSMLKGKGLPNLYWAEAVYTAVYILNRSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIA 2036
ARSMLK K LP WAEAV AVY+LNRSPTK+V KTP EAW +KP V H RVFGSIA
Sbjct: 642 ARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIA 701
Query: 2037 YAHIPSQSREKFDEKGKKLLFIGYSDESKGYRLLDPNTNKVTISRDVVFDETATWDWKGK 2216
+AH+P + R K D+K +K +FIGY + SKGY+L +P+T K ISR++VFDE WDW
Sbjct: 702 HAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSN 761
Query: 2217 Q----VVDSISYEDPSTSQASSQVQNIEQDPKVPT-PRIGAESDHESPIRRTRSLREIYE 2381
+ ++P ++ + P PT +I S +P R RS++E+YE
Sbjct: 762 EEDYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTP--RFRSIQELYE 819
Query: 2382 SSE 2390
+E
Sbjct: 820 VTE 822
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1272
Score = 590 bits (1521), Expect = 0.0
Identities = 321/783 (40%), Positives = 463/783 (59%), Gaps = 16/783 (2%)
Frame = +3
Query: 90 SLEENSVKLQKELKKRDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILKQEFQGTEKTI 269
SL + ++ +KRD AL I QG+ + F ++ AK+AWE L+ ++G ++
Sbjct: 50 SLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVK 109
Query: 270 ALKLQ*LWRDFDNLKMDDRE*VRDFSSRVTEIVNQIKSCGDTIQDKRVVEKVLRCLPPKF 449
++LQ L +F+ L+M + E V D+ SRV + N +K G+ + D R++EKVLR L KF
Sbjct: 110 KVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKF 169
Query: 450 DHAAAAIEESKDLSKMTMYELTGSLLAHEQRINRSAYPSTEQAFQSKQALKSSSSNRGEF 629
+H IEE+KDL MT+ +L GSL A+E++ + EQ + Q K + +
Sbjct: 170 EHIVTVIEETKDLEAMTIEQLLGSLQAYEEK-KKKKEDIVEQVL-NMQITKEENGQSYQR 227
Query: 630 KGGSNYRK------GNGK-WRQNEKTSNWKGKXXXXXXXNPTCVICKKSNHESKDCFFRC 788
+GG R GNG+ WR +E +N +G+ KS ++ +C
Sbjct: 228 RGGGQVRGRGRGGYGNGRGWRPHEDNTNQRGENSSRGRGKGH----PKSRYDKSSV--KC 281
Query: 789 KRCKIPNHSQKDCWFQNXXXXXXXXXXXXXXQSKEEILFYSSANCDSK---NMWYLDSGC 959
C H +C + +E++L +S D + + WYLDSG
Sbjct: 282 YNCGKFGHYASECKAPSNKKFKEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGA 341
Query: 960 SNHMTGNRDIFVDLNPNITSQIILGDGTQRSAKGKGTIAIQSKDGNKKFITDVLYVPNLS 1139
SNHM G + +F +L+ ++ + LGD ++ KGKG I I+ K+G+ +FI++V Y+P++
Sbjct: 342 SNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMK 401
Query: 1140 HNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIASTEMENNIFPLTMPLNENCALKVEN 1319
N+LS+GQL++K + + D I DK+ N + +N +F L + + LK+
Sbjct: 402 TNILSLGQLLEKGYDIRLKDNNLSIRDKESNLITKVPMSKNRMFVLNIRNDIAQCLKMCY 461
Query: 1320 ADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMHKLPFPK-NSW 1496
+ S LWHLR+GHLN GL LL K+MV GLP I NQVCEGC+ G K+ FPK +S
Sbjct: 462 KEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGNQFKMSFPKESSS 521
Query: 1497 RAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEAFSTFLQFKVL 1676
RA+ PLEL+H+D+CGP++ + G YF+LFIDD++R W+YFL +KSE F F +FK
Sbjct: 522 RAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAH 581
Query: 1677 VERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVAERKNRTIVEM 1856
VE++SG +IKT+R+D GGEF F++YC+ NGI+RQLTV R+PQQNGVAERKNRTI+EM
Sbjct: 582 VEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEM 641
Query: 1857 ARSMLKGKGLPNLYWAEAVYTAVYILNRSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIA 2036
ARSMLK K LP WAEAV AVY+LNRSPTK+V KTP EAW +KP V H RVFGSIA
Sbjct: 642 ARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIA 701
Query: 2037 YAHIPSQSREKFDEKGKKLLFIGYSDESKGYRLLDPNTNKVTISRDVVFDETATWDWKGK 2216
+AH+P + R K D+K +K +FIGY + SKGY+L +P+T K ISR++VFDE WDW
Sbjct: 702 HAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSN 761
Query: 2217 Q----VVDSISYEDPSTSQASSQVQNIEQDPKVPT-PRIGAESDHESPIRRTRSLREIYE 2381
+ + P ++ + P PT +I S +P R RS++E+YE
Sbjct: 762 EEDYNFFPHFEEDKPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTP--RFRSIQELYE 819
Query: 2382 SSE 2390
+E
Sbjct: 820 VTE 822
>gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1342
Score = 591 bits (1523), Expect = 0.0
Identities = 325/787 (41%), Positives = 457/787 (58%), Gaps = 20/787 (2%)
Frame = +3
Query: 90 SLEENSVKLQKELKKRDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILKQEFQGTEKTI 269
SL + ++ +KRD AL I QG+ + F +I GVK AK+AWE LK ++G ++
Sbjct: 50 SLSQAQKDSLRDSRKRDKKALCLIYQGLDEDTFEKISGVKTAKEAWEKLKISYKGADQVK 109
Query: 270 ALKLQ*LWRDFDNLKMDDRE*VRDFSSRVTEIVNQIKSCGDTIQDKRVVEKVLRCLPPKF 449
++LQ L +F+ L M + E V D+ SRV + N +K G+ + D R++EK+LR L PKF
Sbjct: 110 KVRLQTLRGEFEALHMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKILRSLDPKF 169
Query: 450 DHAAAAIEESKDLSKMTMYELTGSLLAHEQRINRSAYPSTEQAFQS-----------KQA 596
+H EE+KDL M++ +L GSL A+E++ + EQ F++ Q+
Sbjct: 170 EHIVTITEETKDLEAMSIEQLLGSLQAYEEK-KKKKEEIVEQVFKAHVDSRKEENAHNQS 228
Query: 597 LKSSSSN--RGEFKGGSNYRKGNGKWRQNEKTSNWKGKXXXXXXXNPT---CVICKKSNH 761
+S S RG G R+ N ++ E ++ +G+ + + C C K H
Sbjct: 229 RRSYSQEQGRGRAYGHGQGRRPNNNNQRGESSNRGRGRGNPNSRYDKSRIKCYNCNKFGH 288
Query: 762 ESKDCFFRCKRCKIPNHSQKDCWFQNXXXXXXXXXXXXXXQSKEEILFYSSANCDSKNMW 941
+ +C + PN +N + +L Y + N W
Sbjct: 289 YASEC-------RAPN--------KNKVEEKANYAEERCQEDGTLLLAYKGQDKGEDNQW 333
Query: 942 YLDSGCSNHMTGNRDIFVDLNPNITSQIILGDGTQRSAKGKGTIAIQSKDGNKKFITDVL 1121
YLDSG SNHM G R +FV+L+ ++ + GD ++ + +GKG + I+ K+G +FI++V
Sbjct: 334 YLDSGASNHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNVLIRLKNGEHQFISNVY 393
Query: 1122 YVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIASTEMENNIFPLTMPLNENC 1301
YVP++ N+LS+GQL++K + + + I D + N +F L + +
Sbjct: 394 YVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRDNTSRFIAKVPMTRNRMFVLNIQSDGPQ 453
Query: 1302 ALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMHKLPF 1481
LK+ D S LWHLR+GHLN KGL LL +K MV GLP I NQVCEGC+ GK +L F
Sbjct: 454 CLKMCYKDQSWLWHLRFGHLNFKGLELLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSF 513
Query: 1482 PKNS-WRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEAFSTF 1658
PK S RA+ PLEL+H+D+CGP++ + G YF+LFIDD++R W+YFL +KSE F F
Sbjct: 514 PKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENF 573
Query: 1659 LQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVAERKN 1838
+FK VE++SG LIK LR+DRGGEF F +YC+ NGI+RQLTV R+PQQNGVAERKN
Sbjct: 574 KKFKAHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKN 633
Query: 1839 RTIVEMARSMLKGKGLPNLYWAEAVYTAVYILNRSPTKAVQNKTPYEAWYKQKPKVDHFR 2018
RTI+EMARSMLK K LP +WAEAV AVY+ NRSPT++V KTP EAW +KP + H R
Sbjct: 634 RTILEMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLR 693
Query: 2019 VFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDESKGYRLLDPNTNKVTISRDVVFDETAT 2198
VFGSIA+ H+P + R K D+K +K +FIGY SKGY+L +P++ K ISR+VVFDE
Sbjct: 694 VFGSIAHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDEEGE 753
Query: 2199 WDWKGKQVVDSISYEDPSTSQASSQVQNIEQDPKVPTPRIGAESDHESP---IRRTRSLR 2369
WDW D + Q Q E PT D+ES + R RSL+
Sbjct: 754 WDW-STNCEDHTFFPCVEEDDVEQQQQPQETPTTPPTSPNTTLQDYESSSERMPRFRSLQ 812
Query: 2370 EIYESSE 2390
EIYE++E
Sbjct: 813 EIYEATE 819
>gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1342
Score = 591 bits (1523), Expect = 0.0
Identities = 325/787 (41%), Positives = 457/787 (58%), Gaps = 20/787 (2%)
Frame = +3
Query: 90 SLEENSVKLQKELKKRDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILKQEFQGTEKTI 269
SL + ++ +KRD AL I QG+ + F +I GVK AK+AWE LK ++G ++
Sbjct: 50 SLSQAQKDSLRDSRKRDKKALCLIYQGLDEDTFEKISGVKTAKEAWEKLKISYKGADQVK 109
Query: 270 ALKLQ*LWRDFDNLKMDDRE*VRDFSSRVTEIVNQIKSCGDTIQDKRVVEKVLRCLPPKF 449
++LQ L +F+ L M + E V D+ SRV + N +K G+ + D R++EK+LR L PKF
Sbjct: 110 KVRLQTLRGEFEALHMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKILRSLDPKF 169
Query: 450 DHAAAAIEESKDLSKMTMYELTGSLLAHEQRINRSAYPSTEQAFQS-----------KQA 596
+H EE+KDL M++ +L GSL A+E++ + EQ F++ Q+
Sbjct: 170 EHIVTITEETKDLEAMSIEQLLGSLQAYEEK-KKKKEEIVEQVFKAHVDSRKEENAHNQS 228
Query: 597 LKSSSSN--RGEFKGGSNYRKGNGKWRQNEKTSNWKGKXXXXXXXNPT---CVICKKSNH 761
+S S RG G R+ N ++ E ++ +G+ + + C C K H
Sbjct: 229 RRSYSQEQGRGRAYGHGQGRRPNNNNQRGESSNRGRGRGNPNSRYDKSRIKCYNCNKFGH 288
Query: 762 ESKDCFFRCKRCKIPNHSQKDCWFQNXXXXXXXXXXXXXXQSKEEILFYSSANCDSKNMW 941
+ +C + PN +N + +L Y + N W
Sbjct: 289 YASEC-------RAPN--------KNKVEEKANYAEERCQEDGTLLLAYKGQDKGEDNQW 333
Query: 942 YLDSGCSNHMTGNRDIFVDLNPNITSQIILGDGTQRSAKGKGTIAIQSKDGNKKFITDVL 1121
YLDSG SNHM G R +FV+L+ ++ + GD ++ + +GKG + I+ K+G +FI++V
Sbjct: 334 YLDSGASNHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNVLIRLKNGEHQFISNVY 393
Query: 1122 YVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIASTEMENNIFPLTMPLNENC 1301
YVP++ N+LS+GQL++K + + + I D + N +F L + +
Sbjct: 394 YVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRDNTSRFIAKVPMTRNRMFVLNIQSDGPQ 453
Query: 1302 ALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMHKLPF 1481
LK+ D S LWHLR+GHLN KGL LL +K MV GLP I NQVCEGC+ GK +L F
Sbjct: 454 CLKMCYKDQSWLWHLRFGHLNFKGLELLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSF 513
Query: 1482 PKNS-WRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEAFSTF 1658
PK S RA+ PLEL+H+D+CGP++ + G YF+LFIDD++R W+YFL +KSE F F
Sbjct: 514 PKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENF 573
Query: 1659 LQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVAERKN 1838
+FK VE++SG LIK LR+DRGGEF F +YC+ NGI+RQLTV R+PQQNGVAERKN
Sbjct: 574 KKFKAHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKN 633
Query: 1839 RTIVEMARSMLKGKGLPNLYWAEAVYTAVYILNRSPTKAVQNKTPYEAWYKQKPKVDHFR 2018
RTI+EMARSMLK K LP +WAEAV AVY+ NRSPT++V KTP EAW +KP + H R
Sbjct: 634 RTILEMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLR 693
Query: 2019 VFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDESKGYRLLDPNTNKVTISRDVVFDETAT 2198
VFGSIA+ H+P + R K D+K +K +FIGY SKGY+L +P++ K ISR+VVFDE
Sbjct: 694 VFGSIAHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDEEGE 753
Query: 2199 WDWKGKQVVDSISYEDPSTSQASSQVQNIEQDPKVPTPRIGAESDHESP---IRRTRSLR 2369
WDW D + Q Q E PT D+ES + R RSL+
Sbjct: 754 WDW-STNCEDHTFFPCVEEDDVEQQQQPQETPTTPPTSPNTTLQDYESSSERMPRFRSLQ 812
Query: 2370 EIYESSE 2390
EIYE++E
Sbjct: 813 EIYEATE 819
>ref|XP_009356290.1| PREDICTED: uncharacterized protein LOC103947158 [Pyrus x
bretschneideri]
Length = 798
Score = 571 bits (1472), Expect = 0.0
Identities = 309/728 (42%), Positives = 450/728 (61%), Gaps = 13/728 (1%)
Frame = +3
Query: 96 EENSVKLQKELKK-RDAMALRYIQQGVGKSIFPRIFGVKKAKDAWEILKQEFQGTEKTIA 272
E+ SVK ++ + RDA AL IQ V IFPRI + +K AW++L+QEF+G +K +
Sbjct: 57 EQKSVKSSMKINETRDAKALGIIQGAVSDEIFPRISNFESSKPAWDVLQQEFRGDKKVRS 116
Query: 273 LKLQ*LWRDFDNLKMDDRE*VRDFSSRVTEIVNQIKSCGDTIQDKRVVEKVLRCLPPKFD 452
+KLQ L RDF+ +M++ E + + +R+T+IVNQ+K+ G+ + ++R+V+K+L LP +D
Sbjct: 117 VKLQCLRRDFEYTRMNEGESLSIYLNRMTDIVNQMKTLGEELSNQRLVQKILISLPKSYD 176
Query: 453 HAAAAIEESKDLSKMTMYELTGSLLAHEQRINRSAYPSTEQAFQSKQALKSSSSNR--GE 626
A+ IEE+KDL + + E+ G+L +EQR+N + E+AF S SS + G
Sbjct: 177 SIASIIEETKDLDSIEVQEVIGTLKGYEQRLNMHSNSLVEKAFTSLSVTDRDSSYKAQGN 236
Query: 627 FKGGSNYRKGNGKWRQNEKTSNWKGKXXXXXXXNPTCVICKKSNHESKDCFFR----CKR 794
+ KG GK N+ T K + C IC K ++ C+++ C +
Sbjct: 237 NSNQKKFWKGKGKKWDNKFTPQPKSETISDSTKTK-CKICDKLHYGV--CWYKGKLKCTK 293
Query: 795 CKIPNHSQKDCWFQNXXXXXXXXXXXXXXQSKEEILFYSSANCDSKN---MWYLDSGCSN 965
C+ H KDC + +E +FY+ + ++N +WY+DSGCSN
Sbjct: 294 CERFGHLAKDC----NPRRNQAVNYAHRAEEEEVNVFYACSVARTENKRGIWYIDSGCSN 349
Query: 966 HMTGNRDIFVDLNPNITSQIILGDGTQRSAKGKGTIAIQSKDGNKKFITDVLYVPNLSHN 1145
HMT + V+++ + ++ +G G A GKGT+ +++K G ++FI DV+ VP L N
Sbjct: 350 HMTAYESLLVNIDRSFNCRVKMGSGQLVDATGKGTLVLETK-GGRRFIKDVILVPGLDEN 408
Query: 1146 LLSVGQLIQKDFSVHFDDGTCQILD-KKMNDVIASTEM-ENNIFPLTMPLNENCALKVEN 1319
LLSVGQ+I + + F D +I D + + +++ M EN FPL + ++ ALK
Sbjct: 409 LLSVGQMIAHGYFLLFGDDMVEIFDDRSLQNLVTQVGMTENKSFPLMLDYTDSVALKASV 468
Query: 1320 ADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMHKLPFPKNS-W 1496
A+ S LWH R+GHLN L + +MV GLP+IQ+ + CEGCI GK H+ F + W
Sbjct: 469 AENSWLWHKRFGHLNFHSLKNFERLQMVTGLPEIQETKEPCEGCILGKHHRDSFETGTAW 528
Query: 1497 RAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEAFSTFLQFKVL 1676
RA PL+L+H+D+CGPM+TPT RYF+LFIDD TRM+W+YF+ KSE F+ F +FKV+
Sbjct: 529 RASQPLDLIHTDVCGPMKTPTLSGNRYFLLFIDDCTRMVWVYFMRNKSEVFTIFKKFKVM 588
Query: 1677 VERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVAERKNRTIVEM 1856
VE QSG IK LR+DRGGEF F E+C+ G+++QLTV+ TPQQNGVAERKNRT+VEM
Sbjct: 589 VELQSGLKIKRLRSDRGGEFTSIEFQEFCEWAGLQKQLTVAYTPQQNGVAERKNRTVVEM 648
Query: 1857 ARSMLKGKGLPNLYWAEAVYTAVYILNRSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIA 2036
+SML K +P +W EAV +VY+LNR PTKA++ KTP+EA+ +KP V H +VFGSI
Sbjct: 649 TKSMLHDKKMPLSFWGEAVNASVYLLNRCPTKALEKKTPFEAFSGRKPNVKHLKVFGSIC 708
Query: 2037 YAHIPSQSREKFDEKGKKLLFIGYSDESKGYRLLDPNTNKVTISRDVVFDETATWDWKGK 2216
YA IPSQ R K + K + +GY GYRL + T++V ISRDVVF E W+W+ K
Sbjct: 709 YAQIPSQLRHKLEVNSIKCVLVGYGSCENGYRLYNIETHRVIISRDVVFKENEAWNWETK 768
Query: 2217 QVVDSISY 2240
+ +D+IS+
Sbjct: 769 K-IDTISF 775