BLASTX nr result

ID: Rehmannia30_contig00017555 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00017555
         (412 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011041458.1| PREDICTED: pre-mRNA-processing factor 17-lik...    90   3e-18
ref|XP_002315592.2| hypothetical protein POPTR_0010s07510g [Popu...    90   3e-18
ref|XP_004495236.1| PREDICTED: pre-mRNA-processing factor 17 iso...    90   3e-18
ref|XP_016511916.1| PREDICTED: pre-mRNA-processing factor 17-lik...    90   3e-18
ref|XP_009607514.1| PREDICTED: pre-mRNA-processing factor 17 iso...    90   3e-18
gb|OAE23779.1| hypothetical protein AXG93_3340s1060 [Marchantia ...    90   3e-18
emb|CDY55054.1| BnaCnng28120D [Brassica napus]                         84   7e-18
ref|XP_004232816.1| PREDICTED: pre-mRNA-processing factor 17-lik...    89   7e-18
ref|XP_015066733.1| PREDICTED: pre-mRNA-processing factor 17-lik...    89   7e-18
ref|XP_006347108.1| PREDICTED: pre-mRNA-processing factor 17-lik...    89   7e-18
ref|XP_009789914.1| PREDICTED: pre-mRNA-processing factor 17 iso...    89   7e-18
ref|XP_022851644.1| pre-mRNA-processing factor 17-like [Olea eur...    89   7e-18
ref|XP_022878294.1| pre-mRNA-processing factor 17-like [Olea eur...    89   7e-18
ref|XP_015578655.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro...    89   8e-18
emb|CBI32147.3| unnamed protein product, partial [Vitis vinifera]      89   9e-18
gb|KDO45809.1| hypothetical protein CISIN_1g007411mg [Citrus sin...    89   9e-18
ref|XP_016745910.1| PREDICTED: pre-mRNA-processing factor 17-lik...    89   9e-18
ref|XP_017606664.1| PREDICTED: pre-mRNA-processing factor 17-lik...    89   9e-18
ref|XP_012445228.1| PREDICTED: pre-mRNA-processing factor 17-lik...    89   9e-18
gb|KNA04110.1| hypothetical protein SOVF_202720 [Spinacia oleracea]    89   9e-18

>ref|XP_011041458.1| PREDICTED: pre-mRNA-processing factor 17-like isoform X1 [Populus
           euphratica]
          Length = 574

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 37/37 (100%), Positives = 37/37 (100%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 113
           FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 538 FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 574


>ref|XP_002315592.2| hypothetical protein POPTR_0010s07510g [Populus trichocarpa]
 gb|PNT15072.1| hypothetical protein POPTR_010G064600v3 [Populus trichocarpa]
          Length = 574

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 37/37 (100%), Positives = 37/37 (100%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 113
           FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 538 FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 574


>ref|XP_004495236.1| PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cicer
           arietinum]
          Length = 583

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 37/37 (100%), Positives = 37/37 (100%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 113
           FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 547 FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 583


>ref|XP_016511916.1| PREDICTED: pre-mRNA-processing factor 17-like isoform X1 [Nicotiana
           tabacum]
          Length = 587

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 37/37 (100%), Positives = 37/37 (100%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 113
           FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 551 FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 587


>ref|XP_009607514.1| PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Nicotiana
           tomentosiformis]
          Length = 587

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 37/37 (100%), Positives = 37/37 (100%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 113
           FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 551 FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 587


>gb|OAE23779.1| hypothetical protein AXG93_3340s1060 [Marchantia polymorpha subsp.
           ruderalis]
          Length = 618

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 37/37 (100%), Positives = 37/37 (100%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 113
           FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 582 FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 618


>emb|CDY55054.1| BnaCnng28120D [Brassica napus]
          Length = 132

 Score = 83.6 bits (205), Expect = 7e-18
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYW 110
           F+TL+CH GVCIGAEWHPLEQSKVATCGWDGLIKYW
Sbjct: 97  FKTLRCHNGVCIGAEWHPLEQSKVATCGWDGLIKYW 132


>ref|XP_004232816.1| PREDICTED: pre-mRNA-processing factor 17-like isoform X1 [Solanum
           lycopersicum]
          Length = 570

 Score = 89.0 bits (219), Expect = 7e-18
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 113
           FRTLKCH+GVCIGAEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 534 FRTLKCHDGVCIGAEWHPLEQSKVATCGWDGLIKYWD 570


>ref|XP_015066733.1| PREDICTED: pre-mRNA-processing factor 17-like isoform X1 [Solanum
           pennellii]
          Length = 571

 Score = 89.0 bits (219), Expect = 7e-18
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 113
           FRTLKCH+GVCIGAEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 535 FRTLKCHDGVCIGAEWHPLEQSKVATCGWDGLIKYWD 571


>ref|XP_006347108.1| PREDICTED: pre-mRNA-processing factor 17-like isoform X1 [Solanum
           tuberosum]
          Length = 580

 Score = 89.0 bits (219), Expect = 7e-18
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 113
           FRTLKCH+GVCIGAEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 544 FRTLKCHDGVCIGAEWHPLEQSKVATCGWDGLIKYWD 580


>ref|XP_009789914.1| PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Nicotiana
           sylvestris]
 ref|XP_016508611.1| PREDICTED: pre-mRNA-processing factor 17-like isoform X1 [Nicotiana
           tabacum]
 ref|XP_019259145.1| PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Nicotiana
           attenuata]
 gb|OIT40050.1| compass-like h3k4 histone methylase component wdr5a [Nicotiana
           attenuata]
          Length = 587

 Score = 89.0 bits (219), Expect = 7e-18
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 113
           FRTLKCH+GVCIGAEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 551 FRTLKCHDGVCIGAEWHPLEQSKVATCGWDGLIKYWD 587


>ref|XP_022851644.1| pre-mRNA-processing factor 17-like [Olea europaea var. sylvestris]
          Length = 597

 Score = 89.0 bits (219), Expect = 7e-18
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 113
           FRTLKCHEGVCIG+EWHPLEQSKVATCGWDGLIKYWD
Sbjct: 561 FRTLKCHEGVCIGSEWHPLEQSKVATCGWDGLIKYWD 597


>ref|XP_022878294.1| pre-mRNA-processing factor 17-like [Olea europaea var. sylvestris]
          Length = 599

 Score = 89.0 bits (219), Expect = 7e-18
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 113
           FRTLKCHEGVCIG+EWHPLEQSKVATCGWDGLIKYWD
Sbjct: 563 FRTLKCHEGVCIGSEWHPLEQSKVATCGWDGLIKYWD 599


>ref|XP_015578655.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing factor 17
           [Ricinus communis]
          Length = 467

 Score = 88.6 bits (218), Expect = 8e-18
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 113
           FRTLKCHEGVCIG EWHPLEQSKVATCGWDGLIKYWD
Sbjct: 431 FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 467


>emb|CBI32147.3| unnamed protein product, partial [Vitis vinifera]
          Length = 504

 Score = 88.6 bits (218), Expect = 9e-18
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 113
           FRTLKCHEGVCIG EWHPLEQSKVATCGWDGLIKYWD
Sbjct: 468 FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 504


>gb|KDO45809.1| hypothetical protein CISIN_1g007411mg [Citrus sinensis]
          Length = 531

 Score = 88.6 bits (218), Expect = 9e-18
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 113
           FRTLKCHEGVCIG EWHPLEQSKVATCGWDGLIKYWD
Sbjct: 495 FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 531


>ref|XP_016745910.1| PREDICTED: pre-mRNA-processing factor 17-like [Gossypium hirsutum]
          Length = 538

 Score = 88.6 bits (218), Expect = 9e-18
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 113
           FRTLKCHEGVCIG EWHPLEQSKVATCGWDGLIKYWD
Sbjct: 502 FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 538


>ref|XP_017606664.1| PREDICTED: pre-mRNA-processing factor 17-like isoform X1 [Gossypium
           arboreum]
 ref|XP_017606665.1| PREDICTED: pre-mRNA-processing factor 17-like isoform X1 [Gossypium
           arboreum]
 ref|XP_017606666.1| PREDICTED: pre-mRNA-processing factor 17-like isoform X1 [Gossypium
           arboreum]
          Length = 573

 Score = 88.6 bits (218), Expect = 9e-18
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 113
           FRTLKCHEGVCIG EWHPLEQSKVATCGWDGLIKYWD
Sbjct: 537 FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 573


>ref|XP_012445228.1| PREDICTED: pre-mRNA-processing factor 17-like isoform X3 [Gossypium
           raimondii]
 ref|XP_012445229.1| PREDICTED: pre-mRNA-processing factor 17-like isoform X3 [Gossypium
           raimondii]
 ref|XP_012445230.1| PREDICTED: pre-mRNA-processing factor 17-like isoform X3 [Gossypium
           raimondii]
 ref|XP_016690218.1| PREDICTED: pre-mRNA-processing factor 17-like isoform X3 [Gossypium
           hirsutum]
 ref|XP_016690219.1| PREDICTED: pre-mRNA-processing factor 17-like isoform X3 [Gossypium
           hirsutum]
 ref|XP_016690220.1| PREDICTED: pre-mRNA-processing factor 17-like isoform X3 [Gossypium
           hirsutum]
 ref|XP_016690221.1| PREDICTED: pre-mRNA-processing factor 17-like isoform X3 [Gossypium
           hirsutum]
 ref|XP_016690222.1| PREDICTED: pre-mRNA-processing factor 17-like isoform X3 [Gossypium
           hirsutum]
 ref|XP_016690223.1| PREDICTED: pre-mRNA-processing factor 17-like isoform X3 [Gossypium
           hirsutum]
 ref|XP_016690225.1| PREDICTED: pre-mRNA-processing factor 17-like isoform X3 [Gossypium
           hirsutum]
 gb|KJB53702.1| hypothetical protein B456_009G002100 [Gossypium raimondii]
 gb|KJB53703.1| hypothetical protein B456_009G002100 [Gossypium raimondii]
 gb|KJB53704.1| hypothetical protein B456_009G002100 [Gossypium raimondii]
 gb|KJB53706.1| hypothetical protein B456_009G002100 [Gossypium raimondii]
          Length = 573

 Score = 88.6 bits (218), Expect = 9e-18
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 113
           FRTLKCHEGVCIG EWHPLEQSKVATCGWDGLIKYWD
Sbjct: 537 FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 573


>gb|KNA04110.1| hypothetical protein SOVF_202720 [Spinacia oleracea]
          Length = 577

 Score = 88.6 bits (218), Expect = 9e-18
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = +3

Query: 3   FRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD 113
           FRTLKCHEGVCIG EWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 577


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