BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00017398
         (435 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV23926.1| transcription factor TFIIIB component B'' [Dorcoc...    42   1e-06

>gb|KZV23926.1| transcription factor TFIIIB component B'' [Dorcoceras
           hygrometricum]
          Length = 687

 Score = 42.4 bits (98), Expect(3) = 1e-06
 Identities = 17/29 (58%), Positives = 24/29 (82%)
 Frame = +3

Query: 345 QNANIFIELEALGDFLPHTYSDMECTVPP 431
           +N +IFI L++L DF+PHT SD+E T+PP
Sbjct: 119 ENTDIFIGLDSLDDFIPHTASDIEGTIPP 147



 Score = 28.5 bits (62), Expect(3) = 1e-06
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +1

Query: 226 PNVKGAWHSFIEKSAGE 276
           PN  G WHS +EKS GE
Sbjct: 103 PNDSGGWHSCMEKSLGE 119



 Score = 28.1 bits (61), Expect(3) = 1e-06
 Identities = 18/58 (31%), Positives = 23/58 (39%)
 Frame = +2

Query: 65  AKFRPTRKEXXXXXXXXXXXXXXIDSTQSELSEPVGTAKPSYQRTIMVSGSDACLTSK 238
           AK RP R +               ++ +SELSEP    KPS        GS+  L  K
Sbjct: 30  AKLRPPRNDSTPTLSSSSGAALINEAVESELSEPATFTKPSAHDDKWNCGSECFLDEK 87