BLASTX nr result

ID: Rehmannia30_contig00017168 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00017168
         (427 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN15252.1| hypothetical protein CDL12_12104 [Handroanthus im...   100   9e-23
ref|XP_012834403.1| PREDICTED: glutamyl-tRNA reductase-binding p...    84   2e-16
gb|KZV43203.1| glutamyl-tRNA reductase-binding protein, chloropl...    74   1e-12
ref|XP_022859141.1| glutamyl-tRNA reductase-binding protein, chl...    71   1e-11
ref|NP_001312949.1| glutamyl-tRNA reductase-binding protein, chl...    59   1e-07
ref|XP_009622291.1| PREDICTED: glutamyl-tRNA reductase-binding p...    58   4e-07
ref|NP_001312248.1| glutamyl-tRNA reductase-binding protein, chl...    58   4e-07
emb|CDO97756.1| unnamed protein product [Coffea canephora]             58   5e-07
ref|XP_019193291.1| PREDICTED: glutamyl-tRNA reductase-binding p...    55   3e-06

>gb|PIN15252.1| hypothetical protein CDL12_12104 [Handroanthus impetiginosus]
          Length = 327

 Score =  100 bits (250), Expect = 9e-23
 Identities = 53/82 (64%), Positives = 58/82 (70%)
 Frame = +3

Query: 129 MLPHTRXXXXXXXXXXXXXXHFLKPSVSLSRPVNRAFFNPLIKTSRLRIQPLKCSVSVVS 308
           M  HT+              HF KPSVS SRP++RAFF PL K +R  IQPLKCSVSVVS
Sbjct: 1   MSTHTQSLTCGLSPSILPTTHFPKPSVSPSRPISRAFFKPL-KANRFLIQPLKCSVSVVS 59

Query: 309 DPPRLESTNNHKPFPAEVSRTI 374
           DPP+LE TNNHKPFPAEVSRTI
Sbjct: 60  DPPQLELTNNHKPFPAEVSRTI 81


>ref|XP_012834403.1| PREDICTED: glutamyl-tRNA reductase-binding protein, chloroplastic
           [Erythranthe guttata]
 gb|EYU45933.1| hypothetical protein MIMGU_mgv1a009881mg [Erythranthe guttata]
          Length = 328

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 49/83 (59%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
 Frame = +3

Query: 129 MLPHTRXXXXXXXXXXXXXXHFLKPSVSLSRPVNR-AFFNPLIKTSRLRIQPLKCSVSVV 305
           M+PHT                F KPS SLSRPV R AFF PL K SRL IQPLKCSVSVV
Sbjct: 1   MIPHTHSPTSNLPPSILPAARFPKPSASLSRPVFRPAFFKPL-KPSRLFIQPLKCSVSVV 59

Query: 306 SDPPRLESTNNHKPFPAEVSRTI 374
           S+PP LE  NN KP  AEV+RT+
Sbjct: 60  SNPPNLELANNQKPVLAEVARTV 82


>gb|KZV43203.1| glutamyl-tRNA reductase-binding protein, chloroplastic [Dorcoceras
           hygrometricum]
          Length = 330

 Score = 73.6 bits (179), Expect = 1e-12
 Identities = 39/62 (62%), Positives = 42/62 (67%)
 Frame = +3

Query: 189 HFLKPSVSLSRPVNRAFFNPLIKTSRLRIQPLKCSVSVVSDPPRLESTNNHKPFPAEVSR 368
           H   P VSLSRP NRAFF PL        +PLKCSVSV S+P  L+STN  KP PAEVSR
Sbjct: 21  HSPLPLVSLSRPRNRAFFGPLKANKLATRKPLKCSVSVSSEPLHLQSTNGQKPIPAEVSR 80

Query: 369 TI 374
           TI
Sbjct: 81  TI 82


>ref|XP_022859141.1| glutamyl-tRNA reductase-binding protein, chloroplastic [Olea
           europaea var. sylvestris]
          Length = 329

 Score = 70.9 bits (172), Expect = 1e-11
 Identities = 41/85 (48%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
 Frame = +3

Query: 129 MLPHTRXXXXXXXXXXXXXXHFLKPSVSLSRPVNRAFFNPLIKTS---RLRIQPLKCSVS 299
           MLP T+              HFL+PS    +P+   F +  ++T+   R  IQPLKCSVS
Sbjct: 1   MLPQTKFSISHLPPSIFPTTHFLRPSFPPLKPITLEFKS--LRTNPCHRFSIQPLKCSVS 58

Query: 300 VVSDPPRLESTNNHKPFPAEVSRTI 374
           VVS+P  LE T+N KPFPAEVSRTI
Sbjct: 59  VVSEPTNLELTSNPKPFPAEVSRTI 83


>ref|NP_001312949.1| glutamyl-tRNA reductase-binding protein, chloroplastic-like
           [Nicotiana tabacum]
 ref|XP_009758668.1| PREDICTED: uncharacterized protein LOC104211321 [Nicotiana
           sylvestris]
 gb|ADU60361.1| glutamyl-tRNA reductase binding protein [Nicotiana tabacum]
          Length = 320

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 33/59 (55%), Positives = 42/59 (71%)
 Frame = +3

Query: 198 KPSVSLSRPVNRAFFNPLIKTSRLRIQPLKCSVSVVSDPPRLESTNNHKPFPAEVSRTI 374
           K ++ LS+  +RA F    K+ R  I PLKC+VSVVS+P + E TNN KP+PAEVSRTI
Sbjct: 17  KIALPLSKSWSRAQF-AFSKSPRFSIGPLKCAVSVVSEPIQSEKTNNGKPYPAEVSRTI 74


>ref|XP_009622291.1| PREDICTED: glutamyl-tRNA reductase-binding protein, chloroplastic
           [Nicotiana tomentosiformis]
          Length = 320

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 32/59 (54%), Positives = 40/59 (67%)
 Frame = +3

Query: 198 KPSVSLSRPVNRAFFNPLIKTSRLRIQPLKCSVSVVSDPPRLESTNNHKPFPAEVSRTI 374
           K ++  S+  NRA F    K  R  I PL+C+VSVVS+P + E TNN KP+PAEVSRTI
Sbjct: 17  KVALPFSKSWNRAQFT-FPKCPRFSIGPLRCAVSVVSEPIQSEKTNNGKPYPAEVSRTI 74


>ref|NP_001312248.1| glutamyl-tRNA reductase-binding protein, chloroplastic-like
           [Nicotiana tabacum]
 gb|ADU60362.1| glutamyl-tRNA reductase binding protein [Nicotiana tabacum]
          Length = 320

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 32/59 (54%), Positives = 40/59 (67%)
 Frame = +3

Query: 198 KPSVSLSRPVNRAFFNPLIKTSRLRIQPLKCSVSVVSDPPRLESTNNHKPFPAEVSRTI 374
           K ++  S+  NRA F    K  R  I PL+C+VSVVS+P + E TNN KP+PAEVSRTI
Sbjct: 17  KVALPFSKSWNRAQFT-FPKCPRFSIGPLRCAVSVVSEPIQSEKTNNGKPYPAEVSRTI 74


>emb|CDO97756.1| unnamed protein product [Coffea canephora]
          Length = 328

 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 33/62 (53%), Positives = 41/62 (66%)
 Frame = +3

Query: 189 HFLKPSVSLSRPVNRAFFNPLIKTSRLRIQPLKCSVSVVSDPPRLESTNNHKPFPAEVSR 368
           HF KPS+S+S+P           +S+  + P KCSVSVV +P    ST+NHKPFPAEVSR
Sbjct: 25  HFSKPSLSVSKPS---------PSSQFPVGPPKCSVSVVLEPGT--STDNHKPFPAEVSR 73

Query: 369 TI 374
           TI
Sbjct: 74  TI 75


>ref|XP_019193291.1| PREDICTED: glutamyl-tRNA reductase-binding protein, chloroplastic
           [Ipomoea nil]
          Length = 338

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
 Frame = +3

Query: 129 MLPHTRXXXXXXXXXXXXXXHFLKPSVSLSRPVNRAFFNPLIKTS---RLRIQPLKCSVS 299
           MLP TR              HF K S+ + +   R   +   K +   R   +P KCSVS
Sbjct: 1   MLPQTRTFTPHLPSPLLPAPHFHKTSLLVPKSPKRNQLSWSKKRNPCPRFSNRPPKCSVS 60

Query: 300 VVSDPPRLESTNNHKPFPAEVSRTI 374
           VVS+PP+ E  N+ +PFPAEVSRTI
Sbjct: 61  VVSEPPQSELANDGRPFPAEVSRTI 85


Top