BLASTX nr result

ID: Rehmannia30_contig00017126 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00017126
         (697 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011073429.1| putative F-box/LRR-repeat protein At5g41840 ...    81   4e-14

>ref|XP_011073429.1| putative F-box/LRR-repeat protein At5g41840 [Sesamum indicum]
 ref|XP_011073430.1| putative F-box/LRR-repeat protein At5g41840 [Sesamum indicum]
 ref|XP_020548459.1| putative F-box/LRR-repeat protein At5g41840 [Sesamum indicum]
 ref|XP_020548460.1| putative F-box/LRR-repeat protein At5g41840 [Sesamum indicum]
          Length = 407

 Score = 81.3 bits (199), Expect = 4e-14
 Identities = 51/100 (51%), Positives = 60/100 (60%), Gaps = 9/100 (9%)
 Frame = -2

Query: 669 NGHGFLQGSLETFKPFIIKTLEKKNF---------AKRLKSLQLARLDLDENFSQYPFES 517
           NG   L+G LE   P     LE  N+         AK LK L++ARLDLDEN SQYP+ES
Sbjct: 239 NGVNCLEGELELDAP----NLEYFNYGGFLATRFLAKTLKCLRIARLDLDENVSQYPYES 294

Query: 516 DIQAAELIKVCSDTEKLWLSEKFISVSFYIRILHSFVNPL 397
           D QAA+LIKVCSD EKLWLSE  +       +LH   +PL
Sbjct: 295 DEQAAKLIKVCSDAEKLWLSENVVI------MLHHCPHPL 328


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