BLASTX nr result

ID: Rehmannia30_contig00016852 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00016852
         (583 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011069983.1| UBP1-associated protein 2A-like [Sesamum ind...    72   4e-11
gb|PIN06420.1| RNA-binding protein musashi/mRNA cleavage and pol...    63   3e-08

>ref|XP_011069983.1| UBP1-associated protein 2A-like [Sesamum indicum]
          Length = 442

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 39/75 (52%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
 Frame = +1

Query: 1   SAPIAGMSGNYAI---SPSVMGNYGSQAALHGLGAFQNAQXXXXXXXXXXXXXXXXXXXX 171
           S PIAGM+GNY I   SP V+GNYGSQAALHGLGAFQNAQ                    
Sbjct: 368 STPIAGMTGNYGINSMSPGVIGNYGSQAALHGLGAFQNAQTGQTSMGTAATATTATRAPT 427

Query: 172 XXXXXPITYPSYFGR 216
                P T+PSYF R
Sbjct: 428 SGVSTPATFPSYFSR 442


>gb|PIN06420.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
           factor I complex, subunit HRP1 [Handroanthus
           impetiginosus]
          Length = 435

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 35/71 (49%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
 Frame = +1

Query: 13  AGMSGNY---AISPSVMGNYGSQAALHGLGAFQNAQXXXXXXXXXXXXXXXXXXXXXXXX 183
           +G+SGNY   +ISP+VMGNYGSQAALHGLGAFQN Q                        
Sbjct: 365 SGLSGNYGINSISPNVMGNYGSQAALHGLGAFQNPQLGPSSVGTVATATTATRAPTSVVS 424

Query: 184 XPITYPSYFGR 216
             IT+PSYF R
Sbjct: 425 SSITFPSYFKR 435


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