BLASTX nr result

ID: Rehmannia30_contig00013763 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00013763
         (1125 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_019181932.1| PREDICTED: replication protein A 70 kDa DNA-...    45   7e-06

>ref|XP_019181932.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit D-like
           [Ipomoea nil]
          Length = 519

 Score = 44.7 bits (104), Expect(2) = 7e-06
 Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
 Frame = -1

Query: 894 GSFWVCAHIIGVS--DEWWYISCIR--CIKKLHPTVDQLYCIKCDHLQPTGRIR 745
           G FWV A I+ +    EW+Y SC    C KKL P  + LYC +CD     G +R
Sbjct: 288 GEFWVAARIVFIDCDGEWYYPSCRTKSCYKKLEPKKEFLYCKECDRTWGDGILR 341



 Score = 35.0 bits (79), Expect(2) = 7e-06
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 11/52 (21%)
 Frame = -2

Query: 626 LSASATLLCWDRECEQMIGKSCIDLRQ-----------EFVEVIFFNLVFQI 504
           +  +A  + WDREC +++G S +DL+Q           E   ++  NL+F+I
Sbjct: 351 IKGNAPFVMWDRECTELLGLSALDLKQKNSQGKDGVPAEIQALVGLNLIFRI 402


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