BLASTX nr result

ID: Rehmannia30_contig00012958 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00012958
         (432 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011094840.1| THO complex subunit 4A [Sesamum indicum]           64   1e-09
ref|XP_012831995.1| PREDICTED: THO complex subunit 4A-like [Eryt...    56   2e-06

>ref|XP_011094840.1| THO complex subunit 4A [Sesamum indicum]
          Length = 227

 Score = 64.3 bits (155), Expect = 1e-09
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +1

Query: 1   GMRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 108
           GMRKD  GGRGRGEKISAEDLDADLEKYLA AK+T+
Sbjct: 192 GMRKDHWGGRGRGEKISAEDLDADLEKYLAEAKETS 227


>ref|XP_012831995.1| PREDICTED: THO complex subunit 4A-like [Erythranthe guttata]
 gb|EYU41705.1| hypothetical protein MIMGU_mgv1a013019mg [Erythranthe guttata]
          Length = 233

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = +1

Query: 1   GMRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 108
           GMRK    GRGR EKISAEDLDADL+KYLA AK+TN
Sbjct: 198 GMRKVNGVGRGRAEKISAEDLDADLDKYLAKAKETN 233


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