BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00012579
         (3144 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo...   694   0.0  
gb|PNX93614.1| retrovirus-related Pol polyprotein from transposo...   689   0.0  
gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposo...   691   0.0  
gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposo...   670   0.0  
gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposo...   681   0.0  
gb|PNY16454.1| flavonol sulfotransferase-like protein [Trifolium...   672   0.0  
gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposo...   679   0.0  
gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposo...   660   0.0  
gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposo...   663   0.0  
gb|PRQ55089.1| putative RNA-directed DNA polymerase [Rosa chinen...   663   0.0  
gb|PRQ29719.1| putative RNA-directed DNA polymerase [Rosa chinen...   658   0.0  
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   667   0.0  
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]   660   0.0  
gb|KZV25004.1| Cysteine-rich RLK (receptor-like protein kinase) ...   658   0.0  
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]   661   0.0  
gb|PNX93071.1| retrovirus-related Pol polyprotein from transposo...   658   0.0  
gb|PNY12226.1| retrovirus-related Pol polyprotein from transposo...   654   0.0  
dbj|GAU15708.1| hypothetical protein TSUD_307180 [Trifolium subt...   647   0.0  
gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposo...   660   0.0  
gb|PNX93131.1| retrovirus-related Pol polyprotein from transposo...   645   0.0  

>gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1316

 Score =  694 bits (1792), Expect(2) = 0.0
 Identities = 370/790 (46%), Positives = 490/790 (62%), Gaps = 5/790 (0%)
 Frame = +1

Query: 130  LDMWHKRLGHASFSLLEHLPFLKPLCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNL 309
            +D+WH R+GH S   L+  PFL         T+   C  CH AKQ +LPFP S S+A   
Sbjct: 413  IDLWHFRMGHLSHERLQSFPFLS------VDTSFS-CNTCHHAKQKKLPFPLSHSYASQP 465

Query: 310  FDLVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQF 489
            FDL+H+DIWGP S + +    Y LTIVDD +R  WL+LM +KS+  + + NFI  V+ QF
Sbjct: 466  FDLLHMDIWGPCSVTSMHGHKYFLTIVDDHTRFTWLFLMQNKSETRQHIINFINQVETQF 525

Query: 490  NTNVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLM 669
            + +VK  R+DNG EF   S    F S GI+HQ +CV TPQQNGIVERKH+HLL++ R+L+
Sbjct: 526  DKHVKVIRTDNGLEF---SMTQYFSSKGIIHQTTCVETPQQNGIVERKHQHLLNVTRSLL 582

Query: 670  FQSKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANT 849
            FQ+ LPS FW F+L+ A ++IN +PT  L+  SP+E LY H  + S+L  FGCL YS+  
Sbjct: 583  FQANLPSIFWCFALMHATFLINCIPTPFLHNISPFEKLYGHPCDISILCVFGCLCYSSTI 642

Query: 850  QPHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAISPL 1029
              H+ K  PR + CIFLG+ P  KG+ L+NL T  +LVSR+V FHE  FP    +   P 
Sbjct: 643  TSHRTKLDPRAHPCIFLGFKPHTKGYLLFNLHTHGLLVSRNVLFHEDHFP----SFTKPH 698

Query: 1030 TPLPQVPITSSDLLDTPLH---VTTPAVSETEFAXXXXXXXXXXXXXXXXXRASSRISKP 1200
            +P    P+        P+H   V  P    +                    R S+R  +P
Sbjct: 699  SPSFSSPV--------PIHYNYVDYPTFPSSSIVESSDPPTSDQHSSPPPLRRSTRPRRP 750

Query: 1201 PGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSFPY--TISPLFHSTYVSFLAN 1374
            P +L D+            A     +   +TG  HP+HSF     +SP FH     ++ +
Sbjct: 751  PTYLQDF----------HGAFTSTSTAHSSTGIRHPLHSFLSYDLLSPSFHH----YVFS 796

Query: 1375 VSTTKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNP 1554
            +S+  EP ++ +A K   W++AMH+E+ ALE N TW +  LPP K  IGC+WV+KVK   
Sbjct: 797  ISSVTEPKNFAEASKSDSWLKAMHEEIFALEANNTWVLTTLPPHKTAIGCRWVYKVKHKA 856

Query: 1555 DGSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAF 1734
            DGS+DRYKARLVAKGY Q+ G+D++D FSPVAK+ TVRLL+++A I NW L QLD+NNAF
Sbjct: 857  DGSIDRYKARLVAKGYTQMEGLDFFDTFSPVAKLTTVRLLLSLAAINNWHLKQLDVNNAF 916

Query: 1735 LHGHLDESFYMLPPDGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPH 1914
            LHG L+E  YM  P G T   PGQVC L++SLYGLKQASRQW   L   L + G   SP 
Sbjct: 917  LHGDLNEEVYMQLPPGLTPSFPGQVCRLQRSLYGLKQASRQWYARLSSFLIQHGYVPSPS 976

Query: 1915 DPCLFIRHDGSHFLALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEI 2094
            D  LF++   +   A+LIYVDD+++ G++  +I  L S L T F IKDLG  +YFLG+E+
Sbjct: 977  DHSLFLKCSPATTTAILIYVDDIVLAGNDLTEIHHLTSLLHTTFQIKDLGNLKYFLGLEV 1036

Query: 2095 ARGSAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGR 2274
            AR   G  L QRKYILD+LSD GML  KPV TP+   + L+  SG PL +   YR L+GR
Sbjct: 1037 ARNHTGIHLCQRKYILDLLSDTGMLASKPVSTPMDYSMHLSASSGTPLTDTAAYRRLVGR 1096

Query: 2275 LLYLNLTRPDITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTA 2454
            L+YL  TRPDITY+VQQLSQF+++P T H  A   ++RYLKG P  G+F + +SS+ L A
Sbjct: 1097 LIYLTNTRPDITYAVQQLSQFVSNPTTAHRQALFRILRYLKGTPGSGIFLSVNSSVQLRA 1156

Query: 2455 YCDADWGSCP 2484
            + D+DW  CP
Sbjct: 1157 FSDSDWAGCP 1166



 Score =  178 bits (451), Expect(2) = 0.0
 Identities = 91/152 (59%), Positives = 110/152 (72%)
 Frame = +3

Query: 2481 PDTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSL 2660
            PDTR+SITG+ + LG  LISWK KKQ TVS+SS+EAEYRAL+TT CEL WLSYL  DF +
Sbjct: 1166 PDTRRSITGFAVYLGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHI 1225

Query: 2661 PLQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLAD 2840
                P  L+CDNQ+AL I +NPVFHERTKH++IDCHIVR+K     +    +SS+ QLAD
Sbjct: 1226 DPISPSILYCDNQSALQIASNPVFHERTKHIEIDCHIVRDKVSTGLLKLLPVSSSQQLAD 1285

Query: 2841 ILTKNLGSSQHSNISSKLGMLDLHSLPSLRGG 2936
            ILTK L      +  SKLGML++HS   L GG
Sbjct: 1286 ILTKPLSPFVFRSHCSKLGMLNIHS--QLEGG 1315


>gb|PNX93614.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1430

 Score =  689 bits (1779), Expect(2) = 0.0
 Identities = 374/807 (46%), Positives = 490/807 (60%), Gaps = 23/807 (2%)
 Frame = +1

Query: 136  MWHKRLGHASFSLLEHLPFLKPLCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNLFD 315
            +WH RLGH S  + + +    P      K+    C +CH AKQ RLPFP S + + ++F+
Sbjct: 488  LWHNRLGHVSDMIHKSISVQFPF--VPFKSHSTPCDICHYAKQKRLPFPDSNTRSSHIFE 545

Query: 316  LVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQFNT 495
            L+H DIWGP     V    Y LT+VDD SR  W+ LM +K++    + NF+  ++ QF+ 
Sbjct: 546  LLHADIWGPNGIVSVNGHKYFLTLVDDFSRFTWIILMKNKTETRNHIMNFVNYIETQFHA 605

Query: 496  NVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMFQ 675
             +KS RSDNG EF  H   D F + GI HQ+SCV TPQQNGIVERKH+H+L++ R L FQ
Sbjct: 606  KLKSLRSDNGNEFRMH---DFFLAKGIAHQRSCVETPQQNGIVERKHQHILNVARALSFQ 662

Query: 676  SKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQP 855
            + LPS FW  S+L + ++INRLPT  L  KSPYEVL+   P    L+ FGCL +++    
Sbjct: 663  AFLPSNFWHLSILHSVHLINRLPTPFLQHKSPYEVLFQQPPTLLHLRTFGCLAFASTLHN 722

Query: 856  HKDKFAPRGYKCIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAISPLTP 1035
            H+ KF PR  K +FLGY  G KGF LY++     LVSR+V F+E  FP  ++ +    + 
Sbjct: 723  HRTKFMPRARKTVFLGYRDGTKGFLLYDISNHSFLVSRNVIFYEDVFPLSSVNSSHTSST 782

Query: 1036 -------LPQVPITSSDLLDTPLHVTTPAVSETEFA-----------XXXXXXXXXXXXX 1161
                   LP  P         PL V+T     T+ A                        
Sbjct: 783  TTLDNFVLPIDPPNFPSSCPAPLSVSTGTNPLTDHAENSATLVDNQVSNSPAVPPQNSSI 842

Query: 1162 XXXXRASSRISKPPGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPI-HSFPYTISP 1338
                R S+RI K PG+L D+  S   +Q  S ++           + +PI  S  YT   
Sbjct: 843  PAPTRVSNRIRKIPGYLQDFHCSLLPSQHQSSSS--------NAFSTYPISSSLSYTNCA 894

Query: 1339 LFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPI 1518
               + Y  F  ++STT EP ++ QACK   W EAM  EL ALELN TW +VDLP GK+PI
Sbjct: 895  ---TAYKHFCLSISTTIEPKTFKQACKSDCWKEAMKSELAALELNRTWSIVDLPTGKNPI 951

Query: 1519 GCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKN 1698
            GCKWV+K+K N DGS++RYKARLVAKGY Q+ GVDY+D FSPVAK+ TV+ L+A+A+IK 
Sbjct: 952  GCKWVYKIKHNADGSIERYKARLVAKGYTQMEGVDYFDTFSPVAKLTTVKTLLALASIKG 1011

Query: 1699 WSLHQLDINNAFLHGHLDESFYMLPPDGY----TKGKPGQVCFLKKSLYGLKQASRQWNT 1866
            W L QLD+NNAFLHG L+E  YM  P G     +     +VC L KSLYGLKQASRQW +
Sbjct: 1012 WFLEQLDVNNAFLHGDLNEEVYMSLPPGVIIPNSCSNTPKVCRLHKSLYGLKQASRQWYS 1071

Query: 1867 ELCDKLTRFGLNQSPHDPCLFIRHDGSHFLALLIYVDDVLVTGSNDADIQALKSYLDTLF 2046
            +L   L   G +QS  D  LF++  GS F ALL+YVDD+++ G+N  +I ++KS+LD  F
Sbjct: 1072 KLSSALLSLGYSQSAADHSLFLKKVGSSFTALLVYVDDIVLAGNNSLEITSVKSFLDKRF 1131

Query: 2047 TIKDLGFARYFLGMEIARGSAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQS 2226
             IKDLG  R+F+G+EIAR   G  LNQRKY L++L D G L  KP  TP    LKL    
Sbjct: 1132 QIKDLGNLRFFVGLEIARSKKGILLNQRKYTLELLQDSGNLAAKPSSTPYDPSLKLHDSE 1191

Query: 2227 GRPLDEPDKYRSLIGRLLYLNLTRPDITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCP 2406
              P ++P  YR LIGRLLYL  TRPDIT++VQQLSQF++SP   H+ AA  ++RYLK  P
Sbjct: 1192 SPPYNDPSGYRRLIGRLLYLTTTRPDITFAVQQLSQFVSSPREVHFQAATKVLRYLKASP 1251

Query: 2407 SLGLFYASSSSLDLTAYCDADWGSCPI 2487
            + GLF++SSSSL L+ + D+DW +C I
Sbjct: 1252 AKGLFFSSSSSLKLSGFSDSDWATCAI 1278



 Score =  174 bits (440), Expect(2) = 0.0
 Identities = 80/143 (55%), Positives = 107/143 (74%)
 Frame = +3

Query: 2487 TRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLPL 2666
            TRKSITGYC+ LG  LISWK KKQ+TVS+SS+EAEYRAL++  CEL WL YLF D  +  
Sbjct: 1279 TRKSITGYCVFLGTSLISWKSKKQSTVSRSSSEAEYRALASLSCELQWLHYLFKDLGIKF 1338

Query: 2667 QLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADIL 2846
              P  ++CDN++A+++  NP FHERTKH++IDCH+VR + +   I    + S+ QLAD+L
Sbjct: 1339 DAPAMVYCDNKSAIYLAHNPSFHERTKHIEIDCHVVRERIQSGLIHLLPVPSSSQLADVL 1398

Query: 2847 TKNLGSSQHSNISSKLGMLDLHS 2915
            TK L SS  +++ SKLG+LD+HS
Sbjct: 1399 TKQLSSSAFASLISKLGLLDIHS 1421


>gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1013

 Score =  691 bits (1782), Expect(2) = 0.0
 Identities = 384/832 (46%), Positives = 502/832 (60%), Gaps = 20/832 (2%)
 Frame = +1

Query: 52   LYIL----ATQSSL-QPTSCPSLTSFTTDSFLDMWHKRLGHASFSLLEHLPFLKPLCNTG 216
            LY++    AT+S L QP    +++  ++DS L  WH RLGH S S    +    P+ +  
Sbjct: 57   LYVIIRDSATRSQLTQPFVGNTISKDSSDSVL--WHHRLGHLSNSTHRIIASQFPIVSYQ 114

Query: 217  AKTAIQQCVVCHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSSSCVANTPYMLTIVDD 396
                   C +CH AKQ RLP   S + + ++ +L+H DIWGPYS   V    Y LT+VDD
Sbjct: 115  HHDV--PCDICHFAKQKRLPHFISNTKSASVIELLHADIWGPYSIPSVFGHKYFLTLVDD 172

Query: 397  CSRGVWLYLMHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFISHSCQDLFHSHGI 576
             SR  W+ +M  KS+  + L NFI  ++ QF T +K  R+DNG+EF+ H   DLF S GI
Sbjct: 173  FSRFTWIVMMKSKSETRQHLTNFISYIETQFQTKLKCLRTDNGSEFLMH---DLFLSKGI 229

Query: 577  LHQKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRLPTSSL 756
            +HQ SCV TPQQNG+VERKH+H+L+  R L FQ+ LP  FW F++  A ++INR+P+  L
Sbjct: 230  IHQGSCVETPQQNGVVERKHQHILNTARALYFQASLPKNFWNFAIQHAVHLINRIPSPLL 289

Query: 757  NMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQKGFKLY 936
            + K+PY+ L+   P    L+ FGCL Y++  Q H+ KF PR  K + LGY  G KG+ LY
Sbjct: 290  DNKTPYQALHQRPPILVHLRSFGCLAYASTLQAHRTKFQPRAKKSVLLGYKEGVKGYLLY 349

Query: 937  NLDTKQILVSRDVDFHEHSFPFH-----NLTAISPLTPLPQVPITSSDLLDTPLHVTTPA 1101
            +L + +  +SR+V FHE +FPFH     +LT  SP     Q PI+S   LD   HV    
Sbjct: 350  DLHSHEFFMSRNVFFHEFTFPFHTPSQTSLTQPSPTPITIQTPISSPYDLDN--HVPPSP 407

Query: 1102 VSETEFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVTS-----NAVAQFSSPAAV 1266
             S T                    R S+R+ +PP +L DY  S       +  FS     
Sbjct: 408  TSSTSIPPEQPHQPLSPAPAPS--RHSTRMRQPPSYLKDYHCSLLAPTGRINSFSG---- 461

Query: 1267 KPDSPRPTTGTPHPIHSFPYTISPLFHS-TYVSFLANVSTTKEPHSYFQACKDPLWVEAM 1443
                      TPH I S   T++  F S +Y  F  +VST  EPH+Y QA K   W+ AM
Sbjct: 462  --------ISTPHSISS---TLTYDFCSPSYKQFCLSVSTNFEPHTYTQASKYDCWIMAM 510

Query: 1444 HKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVD 1623
              EL AL++N+TW +VDLP GK PIGCKWV+K+K   DGS++RYKARLVAKGY Q  G+D
Sbjct: 511  KTELAALDMNQTWSIVDLPSGKRPIGCKWVYKIKYLSDGSIERYKARLVAKGYSQTEGLD 570

Query: 1624 YWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYT----K 1791
            Y D +SPVAK+ TVR+L+A+  IK W L QLD+NNAFLHG L E  YM  P G +     
Sbjct: 571  YLDTYSPVAKLTTVRVLLALTAIKGWFLEQLDVNNAFLHGDLHEEVYMTLPPGLSVPSSS 630

Query: 1792 GKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHDPCLFIRHDGSHFLALLIY 1971
                +VC L KS+YGLKQASRQW ++L   L   G + S  D  LFI+   SHF ALL+Y
Sbjct: 631  NTAPKVCKLHKSIYGLKQASRQWYSKLSSALISMGYSPSTADHSLFIKSSSSHFTALLVY 690

Query: 1972 VDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIARGSAGTFLNQRKYILDIL 2151
            VDD+++ G++  +I  +K+ L   F IKDLG  RYFLG+EIAR + G  LNQRKY L+IL
Sbjct: 691  VDDIILAGNDKPEIDFIKAQLHKCFKIKDLGNLRYFLGLEIARSNKGILLNQRKYTLEIL 750

Query: 2152 SDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLYLNLTRPDITYSVQQLS 2331
             D+G L  KP  TP    LKL    G P ++   YR LIGRLLYL  TRPDI+Y VQQLS
Sbjct: 751  EDVGFLAAKPSSTPFNPSLKLHSDHGSPYNDETAYRRLIGRLLYLTTTRPDISYVVQQLS 810

Query: 2332 QFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAYCDADWGSCPI 2487
            QF++ P   H+ AA  ++RYLKG    GLFY+SS+SL L+A+ D+DW SC I
Sbjct: 811  QFVSKPLDIHYQAATRILRYLKGSHGRGLFYSSSASLKLSAFADSDWASCSI 862



 Score =  164 bits (416), Expect(2) = 0.0
 Identities = 73/143 (51%), Positives = 104/143 (72%)
 Frame = +3

Query: 2487 TRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLPL 2666
            +RKSITG+C+ LG  LISW+ KKQ+T+S+SS+EAEYRAL++  CEL WL YLF+D    L
Sbjct: 863  SRKSITGFCVFLGSSLISWRSKKQSTISRSSSEAEYRALASLTCELQWLHYLFNDLKTSL 922

Query: 2667 QLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADIL 2846
              P  +FCDN++A+++  NP FHERTKH++IDCH++R K +   +    + S+ QLAD  
Sbjct: 923  NFPTSVFCDNKSAIYLAHNPTFHERTKHIEIDCHVIREKIQSRLLHLLPVPSSSQLADAF 982

Query: 2847 TKNLGSSQHSNISSKLGMLDLHS 2915
            TK L ++  ++  SKLG+ D+HS
Sbjct: 983  TKPLHATSFNSFVSKLGLYDVHS 1005


>gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1376

 Score =  670 bits (1728), Expect(2) = 0.0
 Identities = 367/845 (43%), Positives = 512/845 (60%), Gaps = 18/845 (2%)
 Frame = +1

Query: 1    QDLRTDGTIVVGRAVGKLYILATQSSLQPTSCPSLTSFTTDSF-LDMWHKRLGHASFSLL 177
            QD+RT   I      G LY L       P    ++     D   +D+WH RLGH S + L
Sbjct: 400  QDIRTKMKIGSVDVRGGLYQLIPHHFKPPFIHSTIIHPKCDVIPIDLWHFRLGHLSNTRL 459

Query: 178  EHLPFLKPLCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSS-S 354
             ++  L P C T  K     C +CH AKQ +L F +S S A   F L+H+DIWGPYS  S
Sbjct: 460  HNMQQLYP-CLTINKDFT--CNICHYAKQRKLSFSSSHSTASRPFSLLHMDIWGPYSCIS 516

Query: 355  CVANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEF 534
             +    +  TIVDD +   W++LM +KS+    + NFI +++NQFNT +++ ++DNGAEF
Sbjct: 517  SIHGHKFFFTIVDDNTHFTWIFLMINKSETRMHISNFINLIENQFNTRIQTIQTDNGAEF 576

Query: 535  ISHSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLL 714
            +    Q+ F+S GI+HQ +C+ TPQQNG+VERKH+HLL++   L+F SKLP  FW ++LL
Sbjct: 577  LM---QNFFNSKGIVHQTTCIETPQQNGVVERKHQHLLNVTHALLFHSKLPYCFWSYALL 633

Query: 715  TAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCI 894
             A Y+INR+ T  L+ K+P++ LY  T + + L+ FGCL Y + +  ++ K  PR + C+
Sbjct: 634  HATYLINRITTPLLDNKTPFQKLYGQTCDITELRVFGCLCYVSTSTANRKKLDPRAHPCV 693

Query: 895  FLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPF-------HNLTAISPLTPLPQVPI 1053
            FLG+ P  KG+  Y+L T+ I +SR+V F+E+ FP         N+  +SP++     P 
Sbjct: 694  FLGFSPTTKGYITYDLHTRAITISRNVSFYENHFPLLQSTSSTSNIPVVSPISFGIHSP- 752

Query: 1054 TSSDLL----DTPLH-VTTPAVSETEF----AXXXXXXXXXXXXXXXXXRASSRISKPPG 1206
             S DL+    D   H VT+P  + T                        R S+R+  PP 
Sbjct: 753  -SHDLISILPDPHQHNVTSPNPATTSHDSISLAPYSTTADSLPPNSSPLRRSTRLRNPPS 811

Query: 1207 WLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSFPYTISPLFHSTYVSFLANVSTT 1386
            +L DY  S      S+   + P       G  +PI    Y       + + +F++++S  
Sbjct: 812  YLQDYHHSLT----STSTNLHP-------GMLYPIEK--YISYSRLSNDFQAFVSSISAV 858

Query: 1387 KEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSV 1566
             EPHSY +A K   W++AMH EL+AL++N+TW +  LPP K  +GC+W++K+K N DGS+
Sbjct: 859  SEPHSYAEAAKHDCWLKAMHAELEALKMNQTWTLTPLPPHKQAVGCRWIYKIKYNADGSI 918

Query: 1567 DRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGH 1746
            +RYKARLVAKGY QV G+DY   FSPVAK+ TVRLL+A+A + +W L QLD+NNAFLHG 
Sbjct: 919  ERYKARLVAKGYTQVEGLDYLATFSPVAKLTTVRLLLALAAVFDWHLKQLDVNNAFLHGD 978

Query: 1747 LDESFYMLPPDGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHDPCL 1926
            L+E  YM  P G       QVC L+KSLYGLKQASRQW  +L   L   G +QS  D  L
Sbjct: 979  LNEEVYMTLPLGMRPEYSNQVCKLQKSLYGLKQASRQWFAKLSSFLIHHGYHQSASDHSL 1038

Query: 1927 FIRHDGSHFLALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIARGS 2106
            F++   S   ALLIYVDD+++ G+N ++IQ +   LD  F IKDLG  +YFLG+E+AR  
Sbjct: 1039 FMKFSSSSTTALLIYVDDIVLAGNNLSEIQLITGLLDVAFKIKDLGNLKYFLGLEVARNK 1098

Query: 2107 AGTFLNQRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLYL 2286
            +G  L+QRKY+LDILSD GM+  +PV TP+    +L+  SG PL +P  YR L+GRL+YL
Sbjct: 1099 SGIHLSQRKYVLDILSDCGMMASRPVSTPMDYTSRLSASSGTPLADPSSYRRLLGRLIYL 1158

Query: 2287 NLTRPDITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAYCDA 2466
              TRPDI+Y V  LSQF+++P T H  A   ++RYLK  P  GLF+ ++SSL L A+ D+
Sbjct: 1159 TTTRPDISYVVHHLSQFMSAPSTAHSQAIFRILRYLKQAPGSGLFFPTNSSLHLKAFSDS 1218

Query: 2467 DWGSC 2481
            DW  C
Sbjct: 1219 DWAGC 1223



 Score =  178 bits (452), Expect(2) = 0.0
 Identities = 88/151 (58%), Positives = 111/151 (73%)
 Frame = +3

Query: 2484 DTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLP 2663
            DTR+SITG+ + LG  LISW+ KKQ TVS+SS+EAEYRAL+TT  EL WL+YL HD  +P
Sbjct: 1225 DTRRSITGFSVYLGDSLISWRSKKQPTVSRSSSEAEYRALATTTSELQWLTYLLHDLHVP 1284

Query: 2664 LQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADI 2843
            +  P  L+CDNQ+ALHI AN VFHERTKH+DIDCH+VR K +   +    ++S  QLADI
Sbjct: 1285 VHQPALLYCDNQSALHIAANQVFHERTKHIDIDCHLVREKLQSGLLKLLPVASPHQLADI 1344

Query: 2844 LTKNLGSSQHSNISSKLGMLDLHSLPSLRGG 2936
             TK+L  S  + + SKLGML+L+S   L GG
Sbjct: 1345 FTKSLSPSMFTALYSKLGMLNLYS--QLEGG 1373


>gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1423

 Score =  681 bits (1757), Expect(2) = 0.0
 Identities = 365/836 (43%), Positives = 499/836 (59%), Gaps = 17/836 (2%)
 Frame = +1

Query: 28   VVGRAVGKLYILATQSSLQPTSCPSLTSFTTDSFLDMWHKRLGHASFSLLEHLPFLKP-- 201
            ++G A  +  + A  SS +       TS       D+WH RLGH S   L  L    P  
Sbjct: 457  MIGAAELRAGLYAMVSSPESNVVHHCTSHFFTYQSDLWHLRLGHLSHDKLSALKGSYPEI 516

Query: 202  LCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSSSCVANTPYML 381
             CN   K ++  C +CH+AK  RLPFP S + + N+FDL+H+DIWGP S + +    Y L
Sbjct: 517  QCN---KISLP-CEICHLAKHKRLPFPDSLTKSENVFDLIHVDIWGPLSVASIFGHKYFL 572

Query: 382  TIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFISHSCQDLF 561
            TIVDD SR  W++ M +K +   LL+NF+  V+ QF  N+K+ R+DNG+EF+    +D +
Sbjct: 573  TIVDDKSRFTWIFFMKNKFETKLLLQNFVSFVQTQFQQNIKTIRTDNGSEFL---LKDWY 629

Query: 562  HSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRL 741
               GI+HQ SCV TPQQNG+VERKH+H+L + R LMFQS +   FW +++  A ++INRL
Sbjct: 630  AKLGIVHQTSCVNTPQQNGVVERKHQHILSMARALMFQSNVSKMFWNYAIGHAVHLINRL 689

Query: 742  PTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQK 921
            PT  L   SPY VLYS  P++S LK FGCL +++    ++ K  PR  KC+FLGY  G K
Sbjct: 690  PTRFLQQNSPYYVLYSEKPDFSHLKVFGCLAFASTLSHNRTKLEPRSRKCMFLGYSSGTK 749

Query: 922  GFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAIS----PLTPLPQVPITSSDLLDTPLHV 1089
            GF +Y+L T++  +SRDV F+E+ FP     +I     P+ P+ Q+P+TS D + +  H 
Sbjct: 750  GFIMYDLKTRETFISRDVQFYENIFPLQKDFSIQSTDGPVVPIAQMPLTSCDPIPSHTHD 809

Query: 1090 TTPAVSETEFAXXXXXXXXXXXXXXXXX----------RASSRISKPPGWLADYVTSNAV 1239
                + ETE                             R S R+   PG+L DY      
Sbjct: 810  N---LDETEHEHNSSTLPMTNSSNSDQPNIEINIPEIRRTSQRVKNRPGYLQDY------ 860

Query: 1240 AQFSSPAAVKPDSPRPTTGTPHPIHSF-PYTISPLFHSTYVSFLANVSTTKEPHSYFQAC 1416
                + AA K D    T    +PI  + PYT    + +   SF++ +S+  EP SY  A 
Sbjct: 861  --HCTLAASKVDQSSSTAR--YPISDYLPYTS---YSAVQQSFVSTISSIIEPRSYQDAI 913

Query: 1417 KDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAK 1596
                W EA+  ELDAL+  +TW + DLPP K  +GC+WVFKVK + DGSV+RYKARLVAK
Sbjct: 914  NHDCWKEAIRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADGSVERYKARLVAK 973

Query: 1597 GYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPP 1776
            G+ Q+ G+DY D FSPV +M T+R+ +AIA   NWS+HQLDIN AFLHG L E  YM PP
Sbjct: 974  GFTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNWSVHQLDINTAFLHGDLVEEVYMKPP 1033

Query: 1777 DGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHDPCLFIRHDGSHFL 1956
             G     P +VC L+KSLYGLKQASRQWN +L + L  FG  QS  D  LF +     F+
Sbjct: 1034 PGLILSSPNKVCKLQKSLYGLKQASRQWNIKLTETLKLFGFVQSKSDYSLFTKRTNIGFI 1093

Query: 1957 ALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIARGSAGTFLNQRKY 2136
            A+L+YVDD++++GS++ +I  +K  LD  F+IKDLG   YFLG+E +R   G  + QRKY
Sbjct: 1094 AILVYVDDLIISGSDETEIMKVKRLLDKQFSIKDLGQLSYFLGLEFSRSDQGISVCQRKY 1153

Query: 2137 ILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLYLNLTRPDITYS 2316
             L++L D G+L  KP  TP+    +L         +P  YR L+GRL+YL  TRPD+ ++
Sbjct: 1154 ALELLQDTGLLASKPCSTPMDHTTRLHHDPLDLYSDPSSYRRLVGRLIYLTHTRPDLAFA 1213

Query: 2317 VQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAYCDADWGSCP 2484
            V +LSQF++ P   H+ AA  ++RY+K  P+ GLF+ SSS L LT Y D+DW +CP
Sbjct: 1214 VGKLSQFMHQPNNAHFQAARKVLRYVKATPTKGLFFPSSSDLKLTGYTDSDWATCP 1269



 Score =  166 bits (419), Expect(2) = 0.0
 Identities = 85/153 (55%), Positives = 108/153 (70%)
 Frame = +3

Query: 2481 PDTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSL 2660
            PD+R+SI+G+C  LG  L+SWK KKQ  VS+SS+EAEYRAL+  VCE  WL  L  DF L
Sbjct: 1269 PDSRRSISGFCFFLGNALVSWKSKKQNVVSRSSSEAEYRALALGVCEAQWLHKLLTDFQL 1328

Query: 2661 PLQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLAD 2840
               +P+ LFCDNQ+AL+I ANPVFHERTKH++IDCH VR++ +  FI    I+S+ QLAD
Sbjct: 1329 QDLIPISLFCDNQSALYIAANPVFHERTKHVEIDCHTVRDQVQAGFIHLAPITSSGQLAD 1388

Query: 2841 ILTKNLGSSQHSNISSKLGMLDLHSLPSLRGGV 2939
            ILTK L      +   KLG+ +  + PSLR GV
Sbjct: 1389 ILTKPLLPKMFQDFVCKLGLSNF-TTPSLREGV 1420


>gb|PNY16454.1| flavonol sulfotransferase-like protein [Trifolium pratense]
          Length = 1475

 Score =  672 bits (1734), Expect(2) = 0.0
 Identities = 364/840 (43%), Positives = 493/840 (58%), Gaps = 56/840 (6%)
 Frame = +1

Query: 133  DMWHKRLGHASFSLLEHLPFLKPLCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNLF 312
            ++WH R GH S+  L  +  + P            C  C  AKQ RL F TS+S +  +F
Sbjct: 479  NLWHMRFGHTSYDKLVEINKVFPFVKLSKSNI--PCDTCFYAKQKRLSFATSSSVSKAVF 536

Query: 313  DLVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQFN 492
            DLVH+DIWGP S   ++   Y LT+VDD SR  W+YLM +KS+   L++NF+ MVK QF 
Sbjct: 537  DLVHMDIWGPLSIPSMSGYKYFLTVVDDKSRYTWIYLMKYKSETSNLVKNFVSMVKTQFQ 596

Query: 493  TNVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMF 672
              +K  R+DNG EF      + F  +GI HQ SCV TPQQNG+VERKH+HLL   R L+F
Sbjct: 597  KQIKCIRTDNGNEF---KLLNFFSENGIHHQCSCVSTPQQNGVVERKHQHLLGTARALLF 653

Query: 673  QSKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQ 852
            QS LP  FW +++  + +IINRLPT  LN  SPY+VL++  P+ S LK FG L Y+A   
Sbjct: 654  QSSLPKVFWDYAIGHSVHIINRLPTPFLNNMSPYQVLHNALPDISNLKVFGSLCYAATLS 713

Query: 853  PHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPF---------- 1002
             H+ K   R  KC+ LG+  G KG  L +L ++++ VSRDV F EH FPF          
Sbjct: 714  AHRKKLDSRSRKCLLLGFKFGVKGHILLDLKSREVFVSRDVVFFEHIFPFQQQSQDVAVK 773

Query: 1003 ----HNLTAI-----------SPLTPLPQVPITS------------------SDLLDTPL 1083
                H+ + +           SP +P P  PI+S                  S +L++P 
Sbjct: 774  SHLSHSQSPLYDDPFIDCPHSSPESPSPNDPISSPPPSNSLPHDIHNSIPNQSPILNSPP 833

Query: 1084 HVTT-------------PAVSETEFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYV 1224
            H +T             P VS   +                  R S+RI+ PP +L ++ 
Sbjct: 834  HASTLHTPSTNNHDTDNPTVSIPSYVSHHPTPSPAMPPPPT--RKSNRITHPPPYLTEHY 891

Query: 1225 TSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSFPYTISPLFHSTYVSFLANVSTTKEPHSY 1404
              NA    S+      D+P  ++   +P+ S  Y       S +  +L+N+ST  EP  Y
Sbjct: 892  YCNAAIHDSTK-----DTPSSSSKCKYPLSS--YISYQHLSSAHHHYLSNISTISEPTCY 944

Query: 1405 FQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKAR 1584
             +A  DP W  A++ EL AL+   TW +V LP  K  IGCKWVFK+K++ +G+++RYKAR
Sbjct: 945  EKAVCDPNWKAAINAELSALDKYNTWKLVPLPKHKHAIGCKWVFKLKLHANGTIERYKAR 1004

Query: 1585 LVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFY 1764
            LVAKGY Q  G+DY D FSPV KM T+R+ +AIA I+NW L+QLD+N AFLHG LDE  Y
Sbjct: 1005 LVAKGYTQTEGIDYMDTFSPVVKMTTIRMFLAIAAIQNWPLYQLDVNTAFLHGDLDEEVY 1064

Query: 1765 MLPPDGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHDPCLFIRHDG 1944
            M PP G     P  VC L++SLYGLKQASRQWNT+L   L   G  QS  D  LF +   
Sbjct: 1065 MKPPPGLDLPSPNLVCKLQRSLYGLKQASRQWNTKLTQTLLSSGYTQSKSDYSLFTKQAS 1124

Query: 1945 SHFLALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIARGSAGTFLN 2124
            S F  +L+YVDD+++ G++D +IQ +K+ LD  F+IKDLG  +YFLG E+AR  AG  L 
Sbjct: 1125 SGFTVILVYVDDLVLGGTDDKEIQKIKALLDRKFSIKDLGTLKYFLGFEVARTQAGISLC 1184

Query: 2125 QRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLYLNLTRPD 2304
            QRKY LD++ D G+L  KP  TP+   L+L  +SG  L +P  YR L+GRLLYL  +RP+
Sbjct: 1185 QRKYALDLIQDTGLLGAKPCTTPMQPQLQLHSESGTILSDPSTYRRLVGRLLYLTHSRPE 1244

Query: 2305 ITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAYCDADWGSCP 2484
            I YSV +LSQF+++P  +H  A LH+++Y+K CP  GLF+A++SSL L  + D+DW +CP
Sbjct: 1245 IAYSVSKLSQFLSAPTNEHMLAGLHVLKYIKNCPGQGLFFAANSSLKLKGFSDSDWAACP 1304



 Score =  173 bits (438), Expect(2) = 0.0
 Identities = 85/153 (55%), Positives = 107/153 (69%)
 Frame = +3

Query: 2481 PDTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSL 2660
            PDTR+S TG C  LG  LISWK KKQ  VS+SS+EAEYRAL+   CE  WL YL +DF +
Sbjct: 1304 PDTRRSTTGLCFFLGNSLISWKSKKQNVVSRSSSEAEYRALAQATCEAQWLKYLLNDFHI 1363

Query: 2661 PLQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLAD 2840
                P+ L+CDN++ALHI ANPVFHERTKH+++DCH+VR K     I    +SS  Q+AD
Sbjct: 1364 SHSSPIVLYCDNRSALHIAANPVFHERTKHIELDCHVVREKLLAGLIHLLPVSSKEQVAD 1423

Query: 2841 ILTKNLGSSQHSNISSKLGMLDLHSLPSLRGGV 2939
            ILTK+L       + +KLGM+D++S  SLRG V
Sbjct: 1424 ILTKSLHPGPFHTLQNKLGMIDIYS--SLRGDV 1454


>gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1353

 Score =  679 bits (1753), Expect(2) = 0.0
 Identities = 364/836 (43%), Positives = 498/836 (59%), Gaps = 17/836 (2%)
 Frame = +1

Query: 28   VVGRAVGKLYILATQSSLQPTSCPSLTSFTTDSFLDMWHKRLGHASFSLLEHLPFLKP-- 201
            ++G A  +  + A  SS +       TS       D+WH RLGH S   L  L    P  
Sbjct: 387  MIGAAELRAGLYAMVSSPESNVVHHCTSHFFTYQSDLWHLRLGHLSHDKLSALKGSYPEI 446

Query: 202  LCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSSSCVANTPYML 381
             CN   K ++  C +CH+AK  RLPFP S + + N+FDL+H+DIWGP S + +    Y L
Sbjct: 447  QCN---KISLP-CEICHLAKHKRLPFPDSLTKSENVFDLIHVDIWGPLSVASIFGHKYFL 502

Query: 382  TIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFISHSCQDLF 561
            TIVDD SR  W++ M +K +   LL+NF+  V+ QF  N+K+ R+DNG+EF+    +D +
Sbjct: 503  TIVDDKSRFTWIFFMKNKFETKLLLQNFVSFVQTQFQQNIKTIRTDNGSEFL---LKDWY 559

Query: 562  HSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRL 741
               GI+HQ SCV TPQQNG+VERKH+H+L + R LMFQS +   FW +++  A ++INRL
Sbjct: 560  AKLGIVHQTSCVNTPQQNGVVERKHQHILSMARALMFQSNVSKMFWNYAIGHAVHLINRL 619

Query: 742  PTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQK 921
            PT  L   SPY VLYS  P++S LK FGCL +++    ++ K  PR  KC+FLGY  G K
Sbjct: 620  PTRFLQQNSPYYVLYSEKPDFSHLKVFGCLAFASTLSHNRTKLEPRSRKCMFLGYSSGTK 679

Query: 922  GFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAIS----PLTPLPQVPITSSDLLDTPLHV 1089
            GF +Y+L T++  +SRDV F+E+ FP     +I     P+ P+ Q+P+TS D + +  H 
Sbjct: 680  GFIMYDLKTRETFISRDVQFYENIFPLQKDFSIQSTDGPVVPIAQMPLTSCDPIPSHTHD 739

Query: 1090 TTPAVSETEFAXXXXXXXXXXXXXXXXX----------RASSRISKPPGWLADYVTSNAV 1239
                + ETE                             R S R+   PG+L DY      
Sbjct: 740  N---LDETEHEHNSSTLPMTNSSNSDQPNIEINIPEIRRTSQRVKNRPGYLQDY------ 790

Query: 1240 AQFSSPAAVKPDSPRPTTGTPHPIHSF-PYTISPLFHSTYVSFLANVSTTKEPHSYFQAC 1416
                + AA K D    T    +PI  + PYT    + +   SF++ +S+  EP SY  A 
Sbjct: 791  --HCTLAASKVDQSSSTAR--YPISDYLPYTS---YSAVQQSFVSTISSIIEPRSYQDAI 843

Query: 1417 KDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAK 1596
                W EA+  ELDAL+  +TW + DLPP K  +GC+WVFKVK + DGSV+RYKARLVAK
Sbjct: 844  NHDCWKEAIRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADGSVERYKARLVAK 903

Query: 1597 GYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPP 1776
            G+ Q+ G+DY D FSPV +M T+R+ +AIA   NWS+HQLDIN AFLHG L E  YM PP
Sbjct: 904  GFTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNWSVHQLDINTAFLHGDLVEEVYMKPP 963

Query: 1777 DGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHDPCLFIRHDGSHFL 1956
             G     P +VC L+KSLYGLKQ SRQWN +L + L  FG  QS  D  LF +     F+
Sbjct: 964  PGLILSSPNKVCKLQKSLYGLKQVSRQWNIKLTETLKLFGFVQSKSDYSLFTKRTNIGFI 1023

Query: 1957 ALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIARGSAGTFLNQRKY 2136
            A+L+YVDD++++GS++ +I  +K  LD  F+IKDLG   YFLG+E +R   G  + QRKY
Sbjct: 1024 AILVYVDDLIISGSDETEIMKVKRLLDKQFSIKDLGQLSYFLGLEFSRSDQGISVCQRKY 1083

Query: 2137 ILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLYLNLTRPDITYS 2316
             L++L D G+L  KP  TP+    +L         +P  YR L+GRL+YL  TRPD+ ++
Sbjct: 1084 ALELLQDTGLLASKPCSTPMDHTTRLHHDPLDLYSDPSSYRRLVGRLIYLTHTRPDLAFA 1143

Query: 2317 VQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAYCDADWGSCP 2484
            V +LSQF++ P   H+ AA  ++RY+K  P+ GLF+ SSS L LT Y D+DW +CP
Sbjct: 1144 VGKLSQFMHQPNNAHFQAARKVLRYVKATPTKGLFFPSSSDLKLTGYTDSDWATCP 1199



 Score =  166 bits (419), Expect(2) = 0.0
 Identities = 85/153 (55%), Positives = 108/153 (70%)
 Frame = +3

Query: 2481 PDTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSL 2660
            PD+R+SI+G+C  LG  L+SWK KKQ  VS+SS+EAEYRAL+  VCE  WL  L  DF L
Sbjct: 1199 PDSRRSISGFCFFLGNALVSWKSKKQNVVSRSSSEAEYRALALGVCEAQWLHKLLTDFQL 1258

Query: 2661 PLQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLAD 2840
               +P+ LFCDNQ+AL+I ANPVFHERTKH++IDCH VR++ +  FI    I+S+ QLAD
Sbjct: 1259 QDLIPISLFCDNQSALYIAANPVFHERTKHVEIDCHTVRDQVQAGFIHLAPITSSGQLAD 1318

Query: 2841 ILTKNLGSSQHSNISSKLGMLDLHSLPSLRGGV 2939
            ILTK L      +   KLG+ +  + PSLR GV
Sbjct: 1319 ILTKPLLPKMFQDFVCKLGLSNF-TTPSLREGV 1350


>gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1136

 Score =  660 bits (1704), Expect(2) = 0.0
 Identities = 356/788 (45%), Positives = 479/788 (60%), Gaps = 3/788 (0%)
 Frame = +1

Query: 130  LDMWHKRLGHASFSLLEHLPFLKPLCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNL 309
            +D+WH R+GH S   L+ +    P  +     +   C  CH  KQ +L FP S S+A+  
Sbjct: 230  IDLWHFRMGHLSQERLQLMKQSFPFLSVDKSFS---CNTCHHDKQKKLSFPLSHSYALQP 286

Query: 310  FDLVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQF 489
            FDL+H+DIWGP   + +    Y L IVDD +R  WL+LM +KS+  + + NFI  V+ QF
Sbjct: 287  FDLLHMDIWGPCPVTSMHGHKYFLAIVDDHTRFTWLFLMQNKSETRQHIINFINQVETQF 346

Query: 490  NTNVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLM 669
            + NVK  R+DNG EF   S    F S GI+HQ +CV TPQQNGIVERKH+HLL++ R+L+
Sbjct: 347  DKNVKVIRTDNGLEF---SMTQYFSSKGIIHQTTCVETPQQNGIVERKHQHLLNVTRSLL 403

Query: 670  FQSKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANT 849
            FQ+ LPS FW F+L  AA++IN +PT  L+  SP+E LY H  + S+L+ FGCL YS+  
Sbjct: 404  FQANLPSIFWCFALKHAAFLINCIPTPFLHNISPFEKLYGHPCDISILRVFGCLCYSSII 463

Query: 850  QPHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFP-FHNLTAISP 1026
              H+ K  PR + CIFLG+ P  KG+ L NL T  +LVS++V FHE  FP F    + S 
Sbjct: 464  TSHRTKLDPRAHPCIFLGFKPHTKGYLLVNLHTHGLLVSQNVIFHEDHFPSFTKPNSPSF 523

Query: 1027 LTPLPQVPITSSDLLDTPLHVTTPAVSETEFAXXXXXXXXXXXXXXXXXRASSRISKPPG 1206
             +P+P +P   +D          P+   +                    R S+R  +PP 
Sbjct: 524  SSPVP-IPYNYADY---------PSFPSSSIVESSEPPPPDQHSSPPPLRRSTRPRRPPT 573

Query: 1207 WLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSFPY--TISPLFHSTYVSFLANVS 1380
            +L D+             A     P  +TG  HP+HSF     +SP FH     ++ ++S
Sbjct: 574  YLQDF-----------HGAFTSTGPHSSTGIRHPLHSFISYDRLSPSFHH----YVFSIS 618

Query: 1381 TTKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDG 1560
            +  +P ++ +A K   W++AMH+E+ ALE N TW +  LPP K  IGC+WV+KVK   DG
Sbjct: 619  SVTKPKNFVEASKSDSWLKAMHEEISALEANNTWVLTTLPPHKTAIGCRWVYKVKHKADG 678

Query: 1561 SVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLH 1740
            S+DRYKARLVAKGY Q+ G+D++D FSPVAK+ TVRLL+++A I N  L QLD+NN+FLH
Sbjct: 679  SIDRYKARLVAKGYTQMEGLDFFDTFSPVAKLTTVRLLISLAAIHNCHLKQLDVNNSFLH 738

Query: 1741 GHLDESFYMLPPDGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHDP 1920
            G L+E  YM  P G T   PGQVC L++SLYGLKQASRQW   L   L + G   SP D 
Sbjct: 739  GDLNEEVYMQLPPGITPSFPGQVCRLQRSLYGLKQASRQWYARLSSFLIQHGYVPSPSDH 798

Query: 1921 CLFIRHDGSHFLALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIAR 2100
             LF++   +   A+LIYVDD+++ G++  +I  L S L   F IKDLG  +YFLG+E+AR
Sbjct: 799  SLFLKCSPAITTAILIYVDDIVLAGNDLTEIHHLTSLLHNTFQIKDLGNLKYFLGLEVAR 858

Query: 2101 GSAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLL 2280
               G  L QRKY LD+LSD GML  KPV TP+     L+  SG P  +   YR L+GRL+
Sbjct: 859  NHTGIHLCQRKYTLDLLSDTGMLASKPVSTPMDYSTHLSASSGTPFTDTAAYRRLVGRLI 918

Query: 2281 YLNLTRPDITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAYC 2460
            YL  TRP I Y+VQQLSQF+++P T H  A   ++ YLKG P  G+F + +SS+ L A+ 
Sbjct: 919  YLPNTRPAIAYAVQQLSQFVSNPPTAHRQALFRILCYLKGTPGSGIFLSVNSSVQLRAFS 978

Query: 2461 DADWGSCP 2484
            D DW  CP
Sbjct: 979  DYDWAGCP 986



 Score =  181 bits (459), Expect(2) = 0.0
 Identities = 92/152 (60%), Positives = 111/152 (73%)
 Frame = +3

Query: 2481 PDTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSL 2660
            PDTR+SITG+ + LG  LISWK KKQ TVS+SS+EAEYRAL+TT CEL WLSYL  DF +
Sbjct: 986  PDTRRSITGFAVYLGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHI 1045

Query: 2661 PLQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLAD 2840
             L  P  L+CDNQ AL I +NP+FHERTKH++IDCHIVR+K     +    +SS+LQLAD
Sbjct: 1046 DLIRPSILYCDNQFALQIASNPIFHERTKHIEIDCHIVRDKVSTGLLKLLPVSSSLQLAD 1105

Query: 2841 ILTKNLGSSQHSNISSKLGMLDLHSLPSLRGG 2936
            ILTK L      +  SKLGML++HS   L GG
Sbjct: 1106 ILTKPLSPFVFHSHYSKLGMLNIHS--QLEGG 1135


>gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1002

 Score =  663 bits (1710), Expect(2) = 0.0
 Identities = 361/795 (45%), Positives = 485/795 (61%), Gaps = 12/795 (1%)
 Frame = +1

Query: 133  DMWHKRLGHASFSLLEHLPFLKPLCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNLF 312
            D+WH RLGH +   L+ +    P  +   K     C VC++AKQ +LPF  S + A  +F
Sbjct: 90   DLWHIRLGHLAHEKLQAMKSNFPFID--CKKNKDPCNVCYLAKQRQLPFSHSVTKADEIF 147

Query: 313  DLVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQFN 492
            DL+H+DIWGP + + +    + LTIVDD SR  W+Y M HKS+V   L +FI +++NQF 
Sbjct: 148  DLLHVDIWGPTTPASIFGHKFFLTIVDDKSRHTWVYFMKHKSEVADHLSSFITLIENQFG 207

Query: 493  TNVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMF 672
              VK  RSDNG EF+    ++ +H  GILHQ SCV TPQQNGIVERKH+H++ + R L+ 
Sbjct: 208  KKVKCVRSDNGPEFL---LKNFYHEKGILHQTSCVETPQQNGIVERKHQHIMTVARALVM 264

Query: 673  QSKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQ 852
            QS LP  FW +++  A ++INR P+S L  K PYE++Y+  P+ + +K FGCL Y+    
Sbjct: 265  QSNLPKSFWFYAVSHAVFLINRQPSSFLENKIPYEIIYNALPDLAGIKVFGCLAYATTLH 324

Query: 853  PHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPFH-----NLT- 1014
             ++ KF PRG +C+FLG+ P  KG  LY+L++++  +SR V++ EH FPF      +LT 
Sbjct: 325  HNRKKFDPRGRRCVFLGFKPQVKGSILYDLNSRETFLSRHVEYFEHIFPFLPTSPLDLTQ 384

Query: 1015 AISPLTPLPQVPITSSDLLDTPLHV-TTPAVSETEFAXXXXXXXXXXXXXXXXXRASSRI 1191
             IS     P +PI   D   TPL   TTP  S                      R S+R 
Sbjct: 385  TISLPRHQPPLPI---DTDPTPLSTNTTPTSSPVSVVPPPPFV-----------RKSTRP 430

Query: 1192 SKPPGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHS-FPYT-ISPLFHSTYVSF 1365
             K P +L DY     +   +SP   +P          + IH+   Y+ +SP    +  +F
Sbjct: 431  RKLPSYLHDY-HHTLLTTHNSPTISQP---------LYSIHNHISYSNLSP----SQKAF 476

Query: 1366 LANVSTTKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVK 1545
              ++S+ KEP+SY +A +D  W  A+  EL ALE N TW +  LPP K  +GCKWVFK+K
Sbjct: 477  SLSISSIKEPNSYVEAIQDESWKTAIQTELTALEKNNTWILTPLPPNKQVVGCKWVFKLK 536

Query: 1546 MNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDIN 1725
             N DG+++R+KARLVAKGY Q   +DY D FSPV KM TVR L+A+AT KNW +HQLD+N
Sbjct: 537  FNSDGTIERHKARLVAKGYTQTETLDYLDTFSPVVKMTTVRTLLAVATAKNWHIHQLDVN 596

Query: 1726 NAFLHGHLDESFYMLPPDGYTKGKPGQ---VCFLKKSLYGLKQASRQWNTELCDKLTRFG 1896
              FLHG L E  YM PP G T   P Q   VC L KSLYGLKQASRQWN +L   L   G
Sbjct: 597  TTFLHGDLHEEVYMTPPPGLTVS-PHQSNCVCKLVKSLYGLKQASRQWNAKLTSVLIDSG 655

Query: 1897 LNQSPHDPCLFIRHDGSHFLALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARY 2076
              QS  D  LF +  G+ F A+L+YVDD+++ G++  +I  +KS LD  FTIKDLG  +Y
Sbjct: 656  FKQSMADYSLFTKQFGAKFTAILVYVDDLVLAGNDPTEINYIKSLLDQKFTIKDLGQLKY 715

Query: 2077 FLGMEIARGSAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKY 2256
            FLGME+AR S G  L QRKY LD++ D G+L  KP  +P+   +KL    G PL +P +Y
Sbjct: 716  FLGMEVARSSTGIALYQRKYALDLIEDTGLLASKPCKSPMDHSVKLHKTVGTPLTDPTQY 775

Query: 2257 RSLIGRLLYLNLTRPDITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSS 2436
            R L+GRL+YL  TR DI++SV  LSQF++ P   H+ AAL +++Y+K  P  GLF+ SSS
Sbjct: 776  RRLLGRLIYLTNTRADISFSVNHLSQFMDQPTDVHYQAALRILKYVKNAPGKGLFFPSSS 835

Query: 2437 SLDLTAYCDADWGSC 2481
             L L  Y D+DW SC
Sbjct: 836  DLTLKGYSDSDWASC 850



 Score =  178 bits (452), Expect(2) = 0.0
 Identities = 92/152 (60%), Positives = 108/152 (71%)
 Frame = +3

Query: 2484 DTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLP 2663
            DTR+S+TG+   LG  LISWK KKQ TVSKSSAEAEYRAL+ + CE  WLSYL HDF L 
Sbjct: 852  DTRRSVTGFSFFLGPALISWKSKKQATVSKSSAEAEYRALAQSTCEAQWLSYLLHDFGLH 911

Query: 2664 LQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADI 2843
               P+ LFCDNQ+ALHI +NPVFHERTK++++DCHIVR K +   I    IS+  QLAD+
Sbjct: 912  SFHPIVLFCDNQSALHIASNPVFHERTKNIELDCHIVREKLQVGLIHLLPISTADQLADV 971

Query: 2844 LTKNLGSSQHSNISSKLGMLDLHSLPSLRGGV 2939
             TK L       I  KLGM D+HS  SLRGGV
Sbjct: 972  FTKALSLRPFEQIIFKLGMFDIHS--SLRGGV 1001


>gb|PRQ55089.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1285

 Score =  663 bits (1711), Expect(2) = 0.0
 Identities = 372/871 (42%), Positives = 497/871 (57%), Gaps = 44/871 (5%)
 Frame = +1

Query: 1    QDLRTDGTIVVGRAVGKLYILATQSSLQPTSCPSLTSFTTDSFLDMWHKRLGHASFSLLE 180
            QDL++   I  G     LY L      Q  +C ++   T     ++WH+RLGH S     
Sbjct: 276  QDLQSGKMIGTGTEKEGLYRLNLP---QKGTCNAV--HTNSDPNNLWHQRLGHPSNKASS 330

Query: 181  HLPFLKPLCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSSSCV 360
               FL    N    ++   C +C +AK  R PFP S + + + FDL+HIDIWG Y     
Sbjct: 331  LFSFL---ANKACYSS--SCSICPLAKLTRQPFPLSTTRSASCFDLIHIDIWGGYHVPTF 385

Query: 361  ANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFIS 540
            +   Y LTIVDD SR  W+YLM HKS+   LL +FI +  NQF  NV   RSDNG EF  
Sbjct: 386  SGAQYFLTIVDDHSRSTWVYLMKHKSEARTLLIHFIHLAANQFGKNVMVVRSDNGPEF-- 443

Query: 541  HSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTA 720
                  + S GI+HQ SCV TPQQNG+ ERKHRHLL++ R L+FQ+ LP  FW  ++LTA
Sbjct: 444  -KIPQFYSSKGIIHQTSCVNTPQQNGVAERKHRHLLNMARALLFQANLPKPFWGDAILTA 502

Query: 721  AYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFL 900
            AY+INR PT  L  K+P+E L+   P+YS L+ FGC  + +       KF PR  +C+FL
Sbjct: 503  AYLINRTPTPILQGKTPFEKLFHKEPSYSHLRVFGCQCFVSTHPTRPSKFDPRSMECVFL 562

Query: 901  GYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPF--------HNLTAISPLTP------- 1035
            GY  GQKG+K+YNL TK+ LVSRDV F E++FPF           T + P  P       
Sbjct: 563  GYPHGQKGYKVYNLTTKKSLVSRDVIFFENAFPFPKNSESFPSQNTDLFPSIPRLAHYDN 622

Query: 1036 --LPQVPITSSDLLDTPLHVTTPAVSETEF--------------------------AXXX 1131
              +P++P +S      P+    P  S  ++                          +   
Sbjct: 623  PSIPKIPPSSPTHHSPPMISPNPQSSAEQYLNSPSKSLSSTDPVSSDITLPNLDTISSDH 682

Query: 1132 XXXXXXXXXXXXXXRASSRISKPPGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPI 1311
                          R S+R +K P  L D+    A+     P  + P S      TP   
Sbjct: 683  IPSLSPPEQTPPRPRKSTRATKLPTALQDFHIDAAL-----PTRLAPSSSSNEVTTPGTA 737

Query: 1312 HSFPYTIS-PLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDALELNETWDM 1488
            HS  + +S     S + +F AN++  +EP S+ QA KDP W EAM  E+ AL+ N+TW +
Sbjct: 738  HSLSHVLSYANLSSPHRTFTANITLQREPTSFSQAVKDPKWREAMRLEVQALQDNKTWSL 797

Query: 1489 VDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVR 1668
            V  P  K PIGCKWV+K+K NPDG+++RYKARLVAKGY QV G+DY + F+PVAK+ TVR
Sbjct: 798  VPPPAHKRPIGCKWVYKIKYNPDGTIERYKARLVAKGYSQVEGLDYRETFAPVAKLTTVR 857

Query: 1669 LLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGKPGQVCFLKKSLYGLKQA 1848
            +L+++A  +NW LHQLD+NNAFL+G L E  YM  P G+ +    +VC L KSLYGL+QA
Sbjct: 858  VLLSLAAQQNWHLHQLDVNNAFLNGDLHEDVYMHLPPGFERKGEHKVCKLHKSLYGLRQA 917

Query: 1849 SRQWNTELCDKLTRFGLNQSPHDPCLFIRHDGSHFLALLIYVDDVLVTGSNDADIQALKS 2028
            S+QW  +L   L   G  QS  D  +F+R     F ALL+YVDDV++ G+N  DI   KS
Sbjct: 918  SKQWFLKLSSALKSAGFKQSWSDYSMFVRSHQGTFTALLVYVDDVILAGNNLDDIIRTKS 977

Query: 2029 YLDTLFTIKDLGFARYFLGMEIARGSAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQGL 2208
            +L + F +KD+G  +YFLG+E+AR   G  L+QRKY L+IL D G L  KP   PL Q +
Sbjct: 978  FLSSHFKLKDMGQLKYFLGLEVARSKHGIALSQRKYALEILEDTGFLGAKPSRFPLEQNI 1037

Query: 2209 KLAGQSGRPLDEPDKYRSLIGRLLYLNLTRPDITYSVQQLSQFINSPYTDHWDAALHLVR 2388
             L  + GR L++  +YR L+GRL+Y  +TRPD+ Y+V  LSQF++ P   H DAA  ++R
Sbjct: 1038 ILTQEDGRLLEDASQYRRLVGRLIYQTITRPDLVYAVHILSQFMDKPRQPHLDAAHKVLR 1097

Query: 2389 YLKGCPSLGLFYASSSSLDLTAYCDADWGSC 2481
            YLK  P  G+F  S   L+L+AYCDADW  C
Sbjct: 1098 YLKQTPGQGIFLPSKGPLELSAYCDADWARC 1128



 Score =  176 bits (445), Expect(2) = 0.0
 Identities = 85/153 (55%), Positives = 111/153 (72%)
 Frame = +3

Query: 2484 DTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLP 2663
            DTR+S TGYCI LG   ISWK KKQ TVS+SSAEAEYR+++TT CE+ WL Y+  D ++ 
Sbjct: 1130 DTRRSTTGYCIFLGHAPISWKTKKQRTVSRSSAEAEYRSMATTCCEITWLQYILKDLNIQ 1189

Query: 2664 LQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADI 2843
               PV LFCDN+AA+HI +NPVFHERTKH++IDCH+VR K +   I  + I +  Q ADI
Sbjct: 1190 HLQPVKLFCDNKAAIHIASNPVFHERTKHIEIDCHVVREKVQRGLIQTEHIRTKEQPADI 1249

Query: 2844 LTKNLGSSQHSNISSKLGMLDLHSLPSLRGGVD 2942
             TK L S Q S +  KLG++++HS  +LRG ++
Sbjct: 1250 FTKPLSSEQFSLLLGKLGVINIHS--NLRGSIE 1280


>gb|PRQ29719.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1080

 Score =  658 bits (1698), Expect(2) = 0.0
 Identities = 357/790 (45%), Positives = 467/790 (59%), Gaps = 7/790 (0%)
 Frame = +1

Query: 133  DMWHKRLGHASFSLLEHLPFLK-PLCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNL 309
            D+WH+RLGH S  +    PFL+   CN         C +C +AKQ R PFP S S + + 
Sbjct: 200  DLWHQRLGHPSSKVSLLFPFLQNKSCNASP------CSICPLAKQTRRPFPLSVSSSNSC 253

Query: 310  FDLVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQF 489
            FDL+H+DIWG Y    ++   Y LTIVDD SR  W+YLMHHKS+   LL +F+ +V+NQF
Sbjct: 254  FDLIHVDIWGGYHVPSLSGAQYFLTIVDDHSRSTWVYLMHHKSETQALLIHFVNLVENQF 313

Query: 490  NTNVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLM 669
               VK  RSDNG EF    C   + S GILHQ SC+ TPQQNG+ ERKHRHLL+I R L+
Sbjct: 314  GKRVKIVRSDNGPEF---KCTQFYSSKGILHQTSCINTPQQNGVAERKHRHLLNIARALL 370

Query: 670  FQSKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANT 849
            FQS LP  FW  ++LTAAY+INR PT  L  K+P+E L+  +PNYS L+ FGC  + +  
Sbjct: 371  FQSNLPKPFWGDAILTAAYLINRTPTPILQGKTPFETLFHKSPNYSHLRVFGCRCFVSTH 430

Query: 850  QPHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPFHN-LTAISP 1026
                 KF PR  +CIFLGY  GQKG+K+Y+L  K++LVSRDV F E  FP+ + L+  SP
Sbjct: 431  PLRPSKFDPRSTECIFLGYPHGQKGYKVYSLKDKKMLVSRDVIFFETEFPYQSKLSTSSP 490

Query: 1027 LTPLPQVPITSSDLL---DTPLHVTTPAVSETEFAXXXXXXXXXXXXXXXXXRASSRISK 1197
                P  P    D+    D   H + P                         R SSR ++
Sbjct: 491  SVSSPTPPQYHVDISLSQDAIPHSSLPQ-----------------------PRRSSRPTR 527

Query: 1198 PPGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPI-HSFPYT-ISPLFHSTYVSFLA 1371
             P  L D+    A+   ++P++   +      GTPH I H   Y  +SP    T+ +F  
Sbjct: 528  TPTTLQDFHIEAALPSHTAPSSSTSEVTH--LGTPHSIAHVLSYDRLSP----THKAFTV 581

Query: 1372 NVSTTKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMN 1551
            N++  KEP S+ QA  +P W EAM KE+ AL+ N+TW +V LPP K PIGCKWV+K+K N
Sbjct: 582  NITLEKEPRSFSQAVLEPRWREAMDKEIQALQENKTWSLVPLPPDKKPIGCKWVYKIKHN 641

Query: 1552 PDGSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNA 1731
            PDG+V+RYKARLVAKGY QV G+DY + F+PVAK+ TVR+L+++A ++ W LHQLD+NNA
Sbjct: 642  PDGTVERYKARLVAKGYSQVAGIDYRETFAPVAKLTTVRVLLSLAALQGWHLHQLDVNNA 701

Query: 1732 FLHGHLDESFYMLPPDGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSP 1911
            FL+G L E  YM  P G+ +    +VC L KS+YGLKQASRQW  +L   L   G NQS 
Sbjct: 702  FLNGDLYEDVYMKLPPGFGRKGENRVCKLHKSVYGLKQASRQWFLKLSGALKAAGFNQSW 761

Query: 1912 HDPCLFIRHDGSHFLALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGME 2091
             D  LF+RH    F  LL+YVDDV++ G+N  DI   K +L + F +KD+G  RYFLG+E
Sbjct: 762  SDYSLFVRHTQGRFTTLLVYVDDVILAGNNLQDIMETKHFLASHFKLKDMGQLRYFLGIE 821

Query: 2092 IARGSAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIG 2271
            +AR   G  L QRKY L++L D G L  KP   P+ Q L L    G  L +  +YR L+G
Sbjct: 822  VARSKQGIVLCQRKYALEVLEDAGFLGAKPSRFPIDQNLVLTQGEGVVLKDASQYRRLVG 881

Query: 2272 RLLYLNLTRPDITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLT 2451
            RL+YL +TRPD+ Y+                             P  G+   S+  L++ 
Sbjct: 882  RLIYLTVTRPDLVYAT----------------------------PGQGILLPSTGQLEIK 913

Query: 2452 AYCDADWGSC 2481
            AYCDADW  C
Sbjct: 914  AYCDADWARC 923



 Score =  176 bits (445), Expect(2) = 0.0
 Identities = 85/153 (55%), Positives = 111/153 (72%)
 Frame = +3

Query: 2484 DTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLP 2663
            DTR+S TGYCI LG   ISWK KKQ TVS+SSAEAEYR+++TT CE+ WL  L  D ++ 
Sbjct: 925  DTRRSTTGYCIFLGNAPISWKTKKQGTVSRSSAEAEYRSMATTCCEITWLRSLLRDLNVQ 984

Query: 2664 LQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADI 2843
                V LFCDNQA++HI +NPVFHERTKH++IDCH+VR K +   +  K I +  Q AD+
Sbjct: 985  HAHAVKLFCDNQASIHIASNPVFHERTKHIEIDCHVVREKVQRGLVKTKHIRTKEQPADL 1044

Query: 2844 LTKNLGSSQHSNISSKLGMLDLHSLPSLRGGVD 2942
             TK LGS Q S + SKLG++++HS  +LRG ++
Sbjct: 1045 FTKRLGSKQFSALLSKLGVINIHS--NLRGSIE 1075


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  667 bits (1722), Expect(2) = 0.0
 Identities = 374/864 (43%), Positives = 499/864 (57%), Gaps = 37/864 (4%)
 Frame = +1

Query: 1    QDLRTDGTIVVGRAVGKLYILATQSSLQPTSCPSLTSFTTDSFLDMWHKRLGHASFSLLE 180
            QDL++   I +G     LY L      +  +C  + + T D    +WH+RLGH S  +  
Sbjct: 494  QDLQSGKMIGMGTESEGLYCLNLP---RKGTCNVVNTKTQD----LWHQRLGHPSSKVSV 546

Query: 181  HLPFLKPLCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSSSCV 360
              PFL+          +  C +C +AK  R PFP S S + + FDL+H+DIWG Y    +
Sbjct: 547  LFPFLQ-----NKTLDVSTCSICPLAKHTRTPFPLSVSSSDSCFDLIHVDIWGGYHVPSL 601

Query: 361  ANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFIS 540
            +   Y LTIVDD SR  W+YLMHHKS+   LL +F+ +V NQF + VK  RSDNG EF  
Sbjct: 602  SGAQYFLTIVDDHSRSTWVYLMHHKSEARSLLVHFVNLVANQFGSQVKIVRSDNGPEF-K 660

Query: 541  HSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTA 720
            H+    + S GILHQ SC+ TPQQNG+VERKHRHLL++ R L+FQS LP  FW  ++LTA
Sbjct: 661  HT--QFYSSRGILHQTSCINTPQQNGVVERKHRHLLNVARALLFQSHLPKPFWGDAILTA 718

Query: 721  AYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFL 900
            AY+INR PT  L  K+P+E L+  +PNYS L+ FGC  + +       KF PR  + +F+
Sbjct: 719  AYLINRTPTPLLQGKTPFEKLFHKSPNYSHLRVFGCRCFVSTHPLRPSKFDPRSIESVFI 778

Query: 901  GYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPFHN-LTAISP-----LTPLPQVP---- 1050
            GY  GQKG+K+Y+L  K+ L+SRDV F E  FP+ N L+  SP        LPQ P    
Sbjct: 779  GYPHGQKGYKVYSLKDKKXLISRDVTFFETEFPYQNXLSTTSPSLDTFFPSLPQTPDIDD 838

Query: 1051 ---------------ITSS---------DLLDTPLHVTTPAVSETEFAXXXXXXXXXXXX 1158
                            TSS         D   +  HV  P+   +               
Sbjct: 839  DHISFNHSGSNLQPSATSSVDXHPQPTLDNSHSSSHVDPPSSPPS----LNTSPPVISQP 894

Query: 1159 XXXXXRASSRISKPPGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPH--PIHSFPYTI 1332
                 R SSR +K P  L D+    A+         +P  P  T+   H   IHS    +
Sbjct: 895  SPSQPRRSSRPTKTPTTLQDFHIEAALPS-------RPVPPSSTSEVAHSGTIHSLSQVL 947

Query: 1333 S-PLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGK 1509
            S       + +F   ++  KEP S+ QA  D  W EAM+ E+ AL+ N+TW +V LP  K
Sbjct: 948  SYDRLSPMHKAFTVKITLAKEPRSFSQAVLDSRWREAMNTEIQALQANKTWSLVPLPSHK 1007

Query: 1510 DPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIAT 1689
             PIGCKWV+K+K NPDG+++RYKARLVAKG+ QV G+DY + F+PVAK+ TVR+L+++A+
Sbjct: 1008 KPIGCKWVYKIKYNPDGTIERYKARLVAKGFSQVEGIDYRETFAPVAKLTTVRVLLSLAS 1067

Query: 1690 IKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGKPGQVCFLKKSLYGLKQASRQWNTE 1869
            I+ W LHQLD+NNAFL+G L E  YM  P G+ +    +VC L KSLYGLKQASRQW  +
Sbjct: 1068 IQGWHLHQLDVNNAFLNGDLYEDVYMQLPPGFGRKGEHRVCKLHKSLYGLKQASRQWFLK 1127

Query: 1870 LCDKLTRFGLNQSPHDPCLFIRHDGSHFLALLIYVDDVLVTGSNDADIQALKSYLDTLFT 2049
            L   L   G  QS  D  LF R+    F  LL+YVDDV++ G++  DI   K +L + F 
Sbjct: 1128 LSSALKAAGFKQSWSDYSLFXRNTQGRFTTLLVYVDDVILAGNSLEDIIETKQFLASHFK 1187

Query: 2050 IKDLGFARYFLGMEIARGSAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQSG 2229
            +KD+G  RYFLG+E+AR   G  L QRKY L++L D G L  KP   P+ Q L L    G
Sbjct: 1188 LKDMGQLRYFLGIEVARSKQGIVLCQRKYALELLEDAGFLGAKPSRFPVEQSLTLTRGDG 1247

Query: 2230 RPLDEPDKYRSLIGRLLYLNLTRPDITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCPS 2409
              L +  +YR L+GRL+YL +TRPD+ Y+V  LSQF+++P   H DAA  ++RY+K  P 
Sbjct: 1248 AELKDASQYRRLVGRLIYLTITRPDLVYAVHILSQFMDTPRQPHLDAAYKVLRYVKQTPG 1307

Query: 2410 LGLFYASSSSLDLTAYCDADWGSC 2481
             G+F  S+  L+LTAYCDADW  C
Sbjct: 1308 QGIFLPSTGQLELTAYCDADWARC 1331



 Score =  166 bits (419), Expect(2) = 0.0
 Identities = 83/155 (53%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
 Frame = +3

Query: 2484 DTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLP 2663
            DTR+S TGYCI  G   ISWK KKQ TVS+SSAEAEYR+++TT CE+ WL  L  D ++ 
Sbjct: 1333 DTRRSTTGYCIFFGNAPISWKTKKQGTVSRSSAEAEYRSMATTCCEITWLRSLLADLNVN 1392

Query: 2664 LQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADI 2843
                V LFCDNQAA+HI +NPVFHERTKH+++DCH+VR K +   +    I +  Q AD+
Sbjct: 1393 HAHAVKLFCDNQAAIHIASNPVFHERTKHIEMDCHVVREKVQRGLVKTMHIRTQEQPADL 1452

Query: 2844 LTKNLGSSQHSNISSKLGMLDLHSLPSLRGG-VDI 2945
             TK L S Q S + SKLG++++H+  +LRG  VD+
Sbjct: 1453 FTKPLSSKQFSTLLSKLGVINIHT--NLRGSEVDV 1485


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score =  660 bits (1702), Expect(2) = 0.0
 Identities = 374/841 (44%), Positives = 498/841 (59%), Gaps = 12/841 (1%)
 Frame = +1

Query: 1    QDLRTDGTIVVGRAVGKLYILATQSSLQPTSCPSLTSFTTDSFLDMWHKRLGHASFSLLE 180
            QD  T  TI +G+    LY LA   +      P+L ++      D+WH+RLGH S   L+
Sbjct: 500  QDATTRKTIGLGKQHNGLYYLAQDQN------PAL-AYAIHKHSDLWHQRLGHPSSGPLQ 552

Query: 181  HLPFLKPLCNTGAKTAIQQCVVCHMAKQHRLPFPTS--ASHAVNLFDLVHIDIWGPYSSS 354
             L  + P     +K     C +C +AKQ RL FP+S  +SHA   FDL+H DIWGP+  +
Sbjct: 553  VLAKVNPKIYFDSKHV---CDICPLAKQTRLSFPSSFISSHAP--FDLIHCDIWGPHRIN 607

Query: 355  CVANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEF 534
              +   Y LTIVDD +R  W++LM  KS+   +L++FI  V+ QFN  +K+ R+DNG E 
Sbjct: 608  SHSGAXYFLTIVDDHTRYTWIHLMSFKSETQGILQSFISWVETQFNRCIKTLRTDNGTEI 667

Query: 535  ISHSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLL 714
               S +    + GI +  SC +TPQQNG+VERKHRHLL++GR L FQ+ LP KFW  S+ 
Sbjct: 668  --SSMKQYLDTKGINYHHSCAYTPQQNGVVERKHRHLLNVGRALRFQANLPLKFWGESIQ 725

Query: 715  TAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCI 894
            TA Y+INRLPT  L+ KSPY++L +  P+Y  L+ FGCL Y+ N  P   KF  R  +CI
Sbjct: 726  TACYLINRLPTPLLSHKSPYQLLXNKLPSYHHLRTFGCLCYATNLLP-THKFDQRARRCI 784

Query: 895  FLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAISP----LTPLPQV---PI 1053
            F+GY  GQKG+++Y+L T +   S DV FHEH FPFH           + PLPQ    PI
Sbjct: 785  FVGYPLGQKGYRVYDLXTNKFFSSXDVVFHEHIFPFHTNPQEEQHDVVVLPLPQTSYEPI 844

Query: 1054 TSSDLLDTPLHVTTPAVSETEFAXXXXXXXXXXXXXXXXX--RASSRISKPPGWLADYVT 1227
            T+            P +S  E                     R S RI +P   L ++  
Sbjct: 845  TTETTKPQADDQPPPLLSSLESTSNERTLXLDTIVSPPPPTTRRSDRIKQPNVHLRNFHL 904

Query: 1228 SNAVAQFSSPAAVKPDSPRPTTGTPHPIHSFPYTISPLFHSTYVSFLANVSTTKEPHSYF 1407
             +     SS ++         +GT HP+    Y         Y +F+  ++T  EP +Y 
Sbjct: 905  YHTAKVASSQSS-------SLSGTRHPLTR--YISYAQLSPKYRNFVCAITTLVEPTTYE 955

Query: 1408 QACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARL 1587
            QA  DP W EAM  EL ALE N TW +  LP G  PIGCKWV+K+K N DG+V+RYKARL
Sbjct: 956  QAVLDPKWQEAMAAELHALEQNHTWTLTPLPYGHRPIGCKWVYKIKYNSDGTVERYKARL 1015

Query: 1588 VAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYM 1767
            VAKG+ Q  G+DY + FSPVAK+ TVR L+AIA +++WSLHQ+D+ NAFLHG L E  YM
Sbjct: 1016 VAKGFTQREGIDYKETFSPVAKLTTVRCLLAIAAVRHWSLHQMDVQNAFLHGDLLEEVYM 1075

Query: 1768 LPPDGYTK-GKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHDPCLFIRHDG 1944
              P G+ + G+   VC L KSLYGLKQASR W  +    + + G +QS  D  LF +  G
Sbjct: 1076 QLPLGFRQQGETPMVCRLNKSLYGLKQASRSWFRKFSATIQQDGFHQSRADYSLFTKISG 1135

Query: 1945 SHFLALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIARGSAGTFLN 2124
            + F A+LIYVDD+++TG+++  I ALK  L T F IKDLG  RYFLG+E+AR + G  ++
Sbjct: 1136 NSFTAVLIYVDDMIITGNDENVIAALKESLHTKFRIKDLGQLRYFLGIEVARSTDGISIS 1195

Query: 2125 QRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLYLNLTRPD 2304
            QRKY LDIL + G+L  KP+ TP+ +  KL    G  L  P  YR L+G+L+YL +TRP+
Sbjct: 1196 QRKYTLDILDEAGLLGAKPLSTPMEENNKLLPTVGDLLKNPSTYRRLVGQLIYLTITRPE 1255

Query: 2305 ITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAYCDADWGSCP 2484
            I+YSV  LSQF+  P   H  A  HL+RYLKG P  GL++ +  +L L  +CDADW  C 
Sbjct: 1256 ISYSVHILSQFMQEPRKPHLHAVHHLLRYLKGAPGQGLYFPAKGNLLLRGFCDADWARCS 1315

Query: 2485 I 2487
            I
Sbjct: 1316 I 1316



 Score =  171 bits (434), Expect(2) = 0.0
 Identities = 79/143 (55%), Positives = 104/143 (72%)
 Frame = +3

Query: 2487 TRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLPL 2666
            TR+S+TGYCI L G  ISWK KKQTTVS+SS E+EYRA+++  CEL WL YL  D  +  
Sbjct: 1317 TRRSVTGYCIFLXGAXISWKTKKQTTVSRSSXESEYRAMASITCELTWLRYLLDDLKVEH 1376

Query: 2667 QLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADIL 2846
              P  LFCD++AALHI ANPV+HERTKH++IDCH+VR + +   I+   + S+ QLAD+ 
Sbjct: 1377 SQPAKLFCDSKAALHIAANPVYHERTKHIEIDCHVVRERIQSGAIVTAHVPSSCQLADLF 1436

Query: 2847 TKNLGSSQHSNISSKLGMLDLHS 2915
            TK L SS   ++ SK G+LD+H+
Sbjct: 1437 TKPLNSSIFHSLLSKFGVLDIHA 1459


>gb|KZV25004.1| Cysteine-rich RLK (receptor-like protein kinase) 8 [Dorcoceras
            hygrometricum]
          Length = 1404

 Score =  658 bits (1697), Expect(2) = 0.0
 Identities = 356/835 (42%), Positives = 501/835 (60%), Gaps = 8/835 (0%)
 Frame = +1

Query: 1    QDLRTDGTIVVGRAVGKLYILATQSSLQPTSCPSLTSFTTDSFLDMWHKRLGHASFSLLE 180
            QD+     I +G+ +G LY+L       P+      +F ++S  ++WH+R+GH SF+ L 
Sbjct: 478  QDISQIRMIGMGKRIGNLYVLQQPDRFLPSYI--CNTFVSNS--ELWHRRMGHPSFNKLS 533

Query: 181  HLPFLKPLCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSSSCV 360
             L   K + N      +  C  CH++KQ RLP  +  + +  +F+L+HID WGP+S + V
Sbjct: 534  SL---KNVLNIENTDIVNICHSCHLSKQRRLPLASRNNISARIFELLHIDTWGPFSQTSV 590

Query: 361  ANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFIS 540
                +  TIVDD SR  W+Y++  KS V  +  +F  MV  QF   VKS RSDN  E   
Sbjct: 591  DGFRFFFTIVDDHSRYTWVYMLKSKSDVLSIFPDFCRMVSTQFGVTVKSVRSDNAPEL-- 648

Query: 541  HSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTA 720
                D F   GI H  SCV  PQQN +VERKH+H+L++ R L+FQS +P  +W   + T+
Sbjct: 649  -GFADFFAKAGITHYHSCVERPQQNSVVERKHQHILNVARALLFQSHIPLDYWCDCINTS 707

Query: 721  AYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFL 900
             Y+INR P+  L  K+P+E+L+   P+YS LK FGCL Y++     + KF+PR  +C+F+
Sbjct: 708  VYLINRTPSPILAHKTPFELLHGKLPSYSHLKVFGCLCYASTLLSSRHKFSPRAIRCVFI 767

Query: 901  GYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAISPLTPLPQVPITSSDLLD-- 1074
            GY PG KG+KL NL+T +I +SRDV FHE++FP+ N +           P++ SD+    
Sbjct: 768  GYPPGYKGYKLLNLETNEIFISRDVIFHENTFPYQNTS-----------PMSLSDMTFEV 816

Query: 1075 TPLHVTTPAVSETEFAXXXXXXXXXXXXXXXXXRASSRISKP---PGWLADYVTSNAVAQ 1245
            +P    TP++                       +  SR S+P   P  L DY   +    
Sbjct: 817  SPSSQITPSIPADA-------------------QQHSRTSRPHNTPSHLRDYHCYS---- 853

Query: 1246 FSSPAAVKPDSPRPTTGTPHPIHSFPYTISPLFHSTYVSFLANVSTTKEPHSYFQACKDP 1425
             S+P +         T T HPIH  P        S++ +F+ N+S+  EP ++ QA   P
Sbjct: 854  ISTPCS---------TSTAHPIH--PLVNYSKLSSSHRAFVQNISSILEPTTFSQAVSLP 902

Query: 1426 LWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYH 1605
             W +AM +EL ALELN TW +V LP GK  +GC+WV+K K   DGS+ RYKARLVAKGY 
Sbjct: 903  EWRQAMDEELKALELNHTWSIVSLPQGKSAVGCRWVYKAKFAADGSLQRYKARLVAKGYT 962

Query: 1606 QVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYM-LPPDG 1782
            Q  G+DY + FSPVAK+VTVR L+A+A ++ W L QLD+NNAFLHG L E  YM LPP  
Sbjct: 963  QQEGLDYLETFSPVAKLVTVRTLLALAAVRGWFLIQLDVNNAFLHGDLTEEVYMTLPPGF 1022

Query: 1783 YTKGK-PGQ-VCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHDPCLFIRHDGSHFL 1956
             ++G+ P + VC L KS+YGLKQASRQW  +    L   G  QS  D  LFIR D + FL
Sbjct: 1023 CSEGELPSRAVCKLHKSIYGLKQASRQWFAKFSSTLLSIGFIQSHADNSLFIRSDKNIFL 1082

Query: 1957 ALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIARGSAGTFLNQRKY 2136
            AL++YVDD+++  ++      LK +L++ F +KDLG  +YFLG+E+AR + G  + QR Y
Sbjct: 1083 ALVVYVDDIVIATNDQNAASELKDFLNSKFKLKDLGNLKYFLGIEVARSTRGVSICQRNY 1142

Query: 2137 ILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLYLNLTRPDITYS 2316
             + +L++ G+L CKP  TP+    KLA  SG  L +P  YR LIGRLLYL +TRPD+ ++
Sbjct: 1143 AMTLLTEAGLLGCKPRTTPMEANTKLAQDSGEMLSDPASYRRLIGRLLYLTITRPDLVFA 1202

Query: 2317 VQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAYCDADWGSC 2481
            V +LSQ+++ P   H +AAL++++Y+KG    GLFY+SSS L L A+ DADWG+C
Sbjct: 1203 VNKLSQYVSMPRIPHMEAALNILKYVKGTVGQGLFYSSSSDLKLRAFSDADWGAC 1257



 Score =  168 bits (426), Expect(2) = 0.0
 Identities = 78/143 (54%), Positives = 103/143 (72%)
 Frame = +3

Query: 2484 DTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLP 2663
            DTR+S+TGYC+ LG  LISW+ KKQ TVS+SSAEAEYR+L+ + CE+LW+  L  D  + 
Sbjct: 1259 DTRRSVTGYCVFLGESLISWRAKKQQTVSRSSAEAEYRSLAASTCEILWIHQLLADLGVT 1318

Query: 2664 LQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADI 2843
               P  LFCD+QAA+HI +NPVFHERTKH+DIDCHIVR K +   +    +SS  QLAD+
Sbjct: 1319 YNEPTVLFCDSQAAVHIASNPVFHERTKHIDIDCHIVREKVQQKIVKLMHVSSERQLADL 1378

Query: 2844 LTKNLGSSQHSNISSKLGMLDLH 2912
             TK L  S+  N+  K+G+ ++H
Sbjct: 1379 FTKPLLPSRFHNLLKKMGVHNIH 1401


>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
          Length = 1125

 Score =  661 bits (1706), Expect(2) = 0.0
 Identities = 377/841 (44%), Positives = 491/841 (58%), Gaps = 12/841 (1%)
 Frame = +1

Query: 1    QDLRTDGTIVVGRAVGKLYILATQSSLQP---------TSCPSLTSFTTDSFLDMWHKRL 153
            QDL T  TI +G     LY L   +S +P         TSC S +S  T S   +WH+RL
Sbjct: 199  QDLTTRTTIGLGEQRDGLYYLVALASEKPKTQTPSAATTSCRSPSSQVTSSTA-LWHRRL 257

Query: 154  GHASFSLLEHLPFLKPLCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNLFDLVHIDI 333
            GH S S L+ +   K L N   ++    C VC +AKQ +LPF  S+  +V  F+L+H DI
Sbjct: 258  GHLSSSRLDFMA--KHLLNFHFQSN-NACDVCALAKQRQLPFSVSSISSVRPFELIHCDI 314

Query: 334  WGPYSSSCVANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQFNTNVKSFR 513
            WGPY  + ++   Y LTIVDD SR   ++ MHHKS+   LL NF   V+ QF+ ++ + R
Sbjct: 315  WGPYKIASLSGAKYFLTIVDDYSRFTXVFFMHHKSETQHLLVNFFSFVQTQFHVSIANIR 374

Query: 514  SDNGAEFISHSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSK 693
             DNG EF S   ++ F   G  +Q SCV+TPQQNG+VERKHRH+L+  R   FQ+ LP  
Sbjct: 375  VDNGGEFFSX--REFFKQKGTTYQHSCVYTPQQNGVVERKHRHILESARAFXFQAHLPLP 432

Query: 694  FWPFSLLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQ-PHKDKF 870
            FW   + TA +IINRLPT  L+ ++P+E LY   P+YS ++ FGCL Y+ N   PHK  F
Sbjct: 433  FWAECVSTAVHIINRLPTPLLSRQTPFERLYGKLPSYSHIRVFGCLAYATNVHVPHK--F 490

Query: 871  APRGYKCIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAISPLTPLPQVP 1050
            APR  +CIFLGY  GQK +KLY+LDT Q+  SRDV FHE  FP+ ++ +          P
Sbjct: 491  APRAKRCIFLGYPVGQKAYKLYDLDTHQMFTSRDVVFHETIFPYESIPS----------P 540

Query: 1051 ITSSDLLDTPLHVTTPAVSETEFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVTS 1230
             ++SD      H+ +P                         R S R   PP  L DYV +
Sbjct: 541  SSNSDPFLLSHHLASPPPEPI-------------------LRRSQRPHHPPMALRDYVCN 581

Query: 1231 NAVAQFSSPAAVKPDSPRPTTGTPHPIHSFP--YTISPLFHSTYVSFLANVSTTKEPHSY 1404
                Q +SP  + P S  P  GT +P+ +F   +  SP     + SF A VS   EP SY
Sbjct: 582  ----QVTSPNHLPPLSSSPQKGTRYPLCNFVSYHRYSP----QHRSFTAAVSQDIEPTSY 633

Query: 1405 FQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKAR 1584
             +A     W EAM  EL  LE N TW +  LPPGK PIGC+WV+K+K + DG+++R+KAR
Sbjct: 634  AEATSHSHWQEAMQSELATLEANHTWSLTSLPPGKKPIGCRWVYKIKXHSDGTIERFKAR 693

Query: 1585 LVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFY 1764
            LVAKGY Q+ G+DY D FSP AKM+ VR L+A+A  +NWSLHQLD              +
Sbjct: 694  LVAKGYTQLEGIDYHDTFSPTAKMIXVRCLLALAAAQNWSLHQLD-------------KF 740

Query: 1765 MLPPDGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHDPCLFIRHDG 1944
            M PP    +     VC L KSLYGLKQASRQW  +    +   G  QS  D  LF    G
Sbjct: 741  MSPPPSLRRQGENLVCHLHKSLYGLKQASRQWFAKFSTAIQAVGFIQSKADYSLFTCRKG 800

Query: 1945 SHFLALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIARGSAGTFLN 2124
              F ALLIYVDD+L+TG++   I ALK +L + F IKDLG  +YFLG+E++R   G  ++
Sbjct: 801  KSFTALLIYVDDILITGNDVNAIVALKQFLHSHFRIKDLGDLKYFLGIEVSRSKKGISIS 860

Query: 2125 QRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLYLNLTRPD 2304
            QRKY L+IL D G L  KPV  P+ Q  KL+  SG  L  P +YR L+GRL+YL +TRPD
Sbjct: 861  QRKYTLEILKDGGFLGAKPVNFPMEQNTKLS-DSGELLKGPSQYRRLVGRLIYLTITRPD 919

Query: 2305 ITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAYCDADWGSCP 2484
            ITYSV  LS+F+++P   H +AAL ++RYLK  P  GLF+ S + L L A+ D DW  CP
Sbjct: 920  ITYSVHVLSRFMHAPRRPHMEAALRVLRYLKNSPGQGLFFPSQNDLSLRAFSDXDWAGCP 979

Query: 2485 I 2487
            I
Sbjct: 980  I 980



 Score =  165 bits (417), Expect(2) = 0.0
 Identities = 78/145 (53%), Positives = 101/145 (69%)
 Frame = +3

Query: 2481 PDTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSL 2660
            P +R+S TGYC+ LG  LISW+ K+Q TVS SS EAEYRA++ T CEL WL  L  D  +
Sbjct: 979  PISRRSXTGYCVFLGSSLISWRTKRQKTVSLSSXEAEYRAMAGTCCELSWLRSLLKDLRI 1038

Query: 2661 PLQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLAD 2840
                P  L+CDN AALHI  NPVFHERT+H+++DCH +R+K +D  ++ K I+ST Q AD
Sbjct: 1039 LHPKPALLYCDNTAALHIAVNPVFHERTRHIEMDCHFIRDKIQDGSVVTKHIASTDQXAD 1098

Query: 2841 ILTKNLGSSQHSNISSKLGMLDLHS 2915
            + TK LG    S +  KLG+LD+HS
Sbjct: 1099 VFTKPLGKETFSTMIHKLGVLDIHS 1123


>gb|PNX93071.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1455

 Score =  658 bits (1698), Expect(2) = 0.0
 Identities = 355/834 (42%), Positives = 494/834 (59%), Gaps = 18/834 (2%)
 Frame = +1

Query: 34   GRAVGKLYILA---TQSSLQPTSCPSL--TSFTTDSFLDMWHKRLGHASFSLLEHLPFLK 198
            GR +  LY L    +  SL   S P +  TS +      +WH R GHAS S L+ +  + 
Sbjct: 502  GRLINGLYYLEGIPSSVSLHSNSIPGIVCTSVSIPQSA-LWHFRFGHASNSRLQIMQQMY 560

Query: 199  PLCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSSSCVANTPYM 378
            P      +     C VCH+AKQ +LP+  S S +    +L+H+DIWGPY+++ V    Y 
Sbjct: 561  PSIVLNKECV---CDVCHLAKQKQLPYQLSTSKSSRCLELLHMDIWGPYTTATVHGHKYF 617

Query: 379  LTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFISHSCQDL 558
            LTIVDD SR  W+ L+  K +V   +++FI +V+ QF++ VK  RSDNG EF   S    
Sbjct: 618  LTIVDDYSRFTWVILLKGKYEVTSQVQHFITLVETQFDSKVKILRSDNGPEF---SLASF 674

Query: 559  FHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINR 738
            + S GI+HQ SC++TP+QNG VERKH+ +L++ R L+ QSKLP KFW +++L + +++NR
Sbjct: 675  YASKGIIHQTSCIYTPKQNGRVERKHQCILNVARALLIQSKLPPKFWGYAVLHSVFLMNR 734

Query: 739  LPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQ 918
            +P+ ++  + PY++LY+  P+ S+LK FGCL Y++  +  + K   R  KC+FLGY  G 
Sbjct: 735  MPSMAIKGQLPYKLLYNKLPDLSMLKVFGCLCYTSTHEAQRSKLDYRAQKCVFLGYKAGM 794

Query: 919  KGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTA----ISP---------LTPLPQVPITS 1059
            KGF +  L +  I+ SR+V F E  FP+ + T     I P         L   P    T 
Sbjct: 795  KGFTVLVLHSGAIITSRNVQFEELIFPYSSTTQTWEYIDPSATTTNNNHLASSPSTFTTP 854

Query: 1060 SDLLDTPLHVTTPAVSETEFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVTSNAV 1239
             D  +  + +TTPA    +                   R SSR+ +PP  LADYV +  +
Sbjct: 855  DDTTNPNIIITTPASLSQQIIPSPPPQA----------RISSRLKRPPSHLADYVCNTTL 904

Query: 1240 AQFSSPAAVKPDSPRPTTGTPHPIHSFPYTISPLFHSTYVSFLANVSTTKEPHSYFQACK 1419
                               TP+PI +  YT         +++  ++ T  EP SY +ACK
Sbjct: 905  ----------------NYTTPYPIQN--YTSHDQLSKDQLAYTLSLLTDTEPSSYTEACK 946

Query: 1420 DPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKG 1599
               WV+AM  EL AL+ N TW +V LP G  PIG KWV+K+K   DGS++RYKARLVAKG
Sbjct: 947  HDCWVKAMQSELQALQQNNTWTIVPLPSGIKPIGSKWVYKIKRKADGSIERYKARLVAKG 1006

Query: 1600 YHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPD 1779
            Y+Q+ GVDY++ FSPVAKM T+R ++AIA+I NW +HQLD+NNAFLHG L E  YM  P 
Sbjct: 1007 YNQIEGVDYFETFSPVAKMTTIRTVLAIASINNWFVHQLDVNNAFLHGDLCEDVYMQIPQ 1066

Query: 1780 GYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHDPCLFIRHDGSHFLA 1959
            G      G VC L KSLYGLKQASR+W  +L   L     +  P DP LFI+   + F A
Sbjct: 1067 GLEGISAGHVCKLVKSLYGLKQASRKWYEKLSQSLNELQFHSVPSDPTLFIKKSATTFTA 1126

Query: 1960 LLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIARGSAGTFLNQRKYI 2139
            LLIYVDD+++TG +  +I  +K++L   F IKDLG  ++FLG+E+A  + G  L+QR+Y 
Sbjct: 1127 LLIYVDDIVLTGDSMDEINLVKTHLHAAFGIKDLGVLKFFLGLEVAHSTKGISLSQRQYC 1186

Query: 2140 LDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLYLNLTRPDITYSV 2319
            LD+L++ G L CKP   P+  G KL      P  +   YR+L+G+LLYL  TRPDI + V
Sbjct: 1187 LDLLAETGDLGCKPSSIPMDPGHKLHHDDSAPHTDITGYRTLVGKLLYLTNTRPDIAFPV 1246

Query: 2320 QQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAYCDADWGSC 2481
            QQL QF++ P + H+ AA  ++RYLKGCP  GLF+  +SSL+L  + DADWG C
Sbjct: 1247 QQLCQFLDCPTSLHYKAAHKVLRYLKGCPGTGLFFPRTSSLNLVGFTDADWGGC 1300



 Score =  167 bits (422), Expect(2) = 0.0
 Identities = 82/150 (54%), Positives = 105/150 (70%)
 Frame = +3

Query: 2484 DTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLP 2663
            DTR+SITGYC  +G  LI WK KKQ T+S+SS+EAEYRAL++  CEL WL+YL  D  + 
Sbjct: 1302 DTRRSITGYCFFIGSSLICWKAKKQQTISRSSSEAEYRALASGTCELQWLTYLLRDLRVN 1361

Query: 2664 LQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADI 2843
            L     L+CD+Q+ALHI +NPVFHERTKHLDIDCH+VR++ K   +    IS   QLADI
Sbjct: 1362 LVQQPTLYCDSQSALHIASNPVFHERTKHLDIDCHVVRDRLKAGLMCLSPISGYDQLADI 1421

Query: 2844 LTKNLGSSQHSNISSKLGMLDLHSLPSLRG 2933
             TK L  +    + +KLG+LD++  P L G
Sbjct: 1422 FTKALHPANFHRLLAKLGLLDIYR-PKLEG 1450


>gb|PNY12226.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1464

 Score =  654 bits (1687), Expect(2) = 0.0
 Identities = 355/840 (42%), Positives = 494/840 (58%), Gaps = 28/840 (3%)
 Frame = +1

Query: 46   GKLYILATQSSLQPTSCPSLTSFTTDSFLDMWHKRLGHASFSLLEHLPFLKPLCNTGAKT 225
            G  Y+  T +S+   S  ++ +F +     +WH R GHAS + LE +  L P  +     
Sbjct: 493  GLYYLEGTNASVHSLSSGTVCTFFSIPQSALWHFRFGHASNTRLEIMHKLYPSISINKDC 552

Query: 226  AIQQCVVCHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSSSCVANTPYMLTIVDDCSR 405
                C VCH+AKQ +L +  S S     FDL+H+DIWGPYS++ +    Y LTIVDD SR
Sbjct: 553  V---CDVCHLAKQKKLSYSLSTSQTTKCFDLLHMDIWGPYSTATLHGHKYFLTIVDDFSR 609

Query: 406  GVWLYLMHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFISHSCQDLFHSHGILHQ 585
              W+ L+  K++V   +++FI +V+NQF++ VK  RSDNG EF   S    + S GI+HQ
Sbjct: 610  FTWVILLKGKNEVASHVQHFIQLVENQFDSTVKIVRSDNGPEF---SIPSFYASKGIVHQ 666

Query: 586  KSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRLPTSSLNMK 765
             SCV+TPQQNG VERKH+ +L I R L+ QS LP+K+W +++L + Y++NR+P+  +   
Sbjct: 667  TSCVYTPQQNGRVERKHQSILAIARALLIQSHLPAKYWGYAVLHSVYLMNRMPSVVIEGD 726

Query: 766  SPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQKGFKLYNLD 945
             PY  L+   P+ S+L+ FGCL Y +    H+ K   R  KC+FLGY  G KGF   +L 
Sbjct: 727  LPYHKLHKELPDISMLRIFGCLCYVSTNDAHRLKLDHRARKCVFLGYKSGTKGFVALDLH 786

Query: 946  TKQILVSRDVDFHEHSFPFHNLTA--------ISPLTPLPQVPI--TSSDLL------DT 1077
            + +++VSR+V F E  FP+ +           + P+ P+P   +  T++D        D 
Sbjct: 787  SSEVVVSRNVQFEELIFPYTSQPKSQTNWEFFVPPIDPIPYTTVNPTNNDATPTAIEPDE 846

Query: 1078 PLHVTTPAVSETEFAXXXXXXXXXXXXXXXXX------------RASSRISKPPGWLADY 1221
            P+  T   V +TE +                             R S+RI+KPP  LADY
Sbjct: 847  PIPSTESPVPQTEPSQSIQQTEPSQSIQQNEPSQSIQPPNPPPLRKSTRITKPPSHLADY 906

Query: 1222 VTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSFPYTISPLFHSTYVSFLANVSTTKEPHS 1401
            V  + +A                  T +PI +  YT      S  +++  ++ T  EP S
Sbjct: 907  VC-HGIAH----------------STKYPISN--YTSHNHISSQQLTYTLSLMTETEPTS 947

Query: 1402 YFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKA 1581
            YF+ACK   WV+AM  EL ALE N+TW +V LP G  PIG KWV+K+K   DGS++RYKA
Sbjct: 948  YFEACKHEHWVKAMQSELQALEQNKTWTIVSLPTGVKPIGSKWVYKIKRKSDGSIERYKA 1007

Query: 1582 RLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESF 1761
            RLVAKGY+QV G+DY++ FSPVAKM T+R+++AIA+I+NW +HQLD+NNAFLHG L E  
Sbjct: 1008 RLVAKGYNQVEGIDYFETFSPVAKMTTIRVVLAIASIRNWFVHQLDVNNAFLHGELCEDV 1067

Query: 1762 YMLPPDGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHDPCLFIRHD 1941
            YM  P G       +VC L KSLYGLKQASR+W  +L   L      Q P DP LF++  
Sbjct: 1068 YMQIPQGLEGFATDKVCKLTKSLYGLKQASRKWYEKLSQFLISHHFIQVPSDPTLFVKKT 1127

Query: 1942 GSHFLALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIARGSAGTFL 2121
               F ALL+YVDD+++TG + A+I  +K+ L   F IKDLG  ++FLG+E+A  + G  L
Sbjct: 1128 SDSFTALLVYVDDIVLTGDSMAEITNIKNELHHTFGIKDLGILKFFLGLEVAHSTKGITL 1187

Query: 2122 NQRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLYLNLTRP 2301
            +QR+Y LD+L++ G L CKP   P+   LKL      P  +   YR+L+G+LLYL  TRP
Sbjct: 1188 SQRQYCLDLLAETGDLGCKPSSIPMDPSLKLHHDDSAPYTDITGYRTLVGKLLYLTNTRP 1247

Query: 2302 DITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAYCDADWGSC 2481
            DI + VQQL QF++ P   H+ AA  ++RYLKGCP  GL++  SS   L  + DADWG C
Sbjct: 1248 DIAFPVQQLCQFLDCPTQLHYKAAHKVLRYLKGCPGSGLYFPRSSDTQLVGFTDADWGGC 1307



 Score =  165 bits (417), Expect(2) = 0.0
 Identities = 80/150 (53%), Positives = 105/150 (70%)
 Frame = +3

Query: 2484 DTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLP 2663
            DTR+SITGYC  LG  LI WK KKQ T+S+SS+EAEYRAL++  CEL WL+YL  D  + 
Sbjct: 1309 DTRRSITGYCFFLGSSLICWKSKKQQTISRSSSEAEYRALASGTCELQWLTYLLRDLQVT 1368

Query: 2664 LQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADI 2843
            L     L+CD+Q+A+HI +NPVFHERTKHLDIDCH+VR + +   +    +S   QLADI
Sbjct: 1369 LIQQPSLYCDSQSAIHIASNPVFHERTKHLDIDCHVVRERLQAGLMKLLPVSGFQQLADI 1428

Query: 2844 LTKNLGSSQHSNISSKLGMLDLHSLPSLRG 2933
            +TK L  +    + +KLG+LD++  P L G
Sbjct: 1429 MTKALHPANFHRLLTKLGLLDIYR-PQLEG 1457


>dbj|GAU15708.1| hypothetical protein TSUD_307180 [Trifolium subterraneum]
          Length = 1433

 Score =  647 bits (1669), Expect(2) = 0.0
 Identities = 360/841 (42%), Positives = 495/841 (58%), Gaps = 25/841 (2%)
 Frame = +1

Query: 34   GRAVGKLYIL-----ATQSSLQPTSCPSLTSFTTDSFLDMWHKRLGHASFSLLEHLPFLK 198
            G+ +  LY L     +T S ++P +    T F+      +WH R GHAS S LE +    
Sbjct: 462  GKLLNGLYYLEGTNASTHSLVKPVTGTVCTVFSIPQSA-LWHFRFGHASNSRLEIMHKSY 520

Query: 199  PLCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSSSCVANTPYM 378
            P  +         C VCH+AKQ +L +  S S +   F+L+H+DIWGPYS++ +    Y 
Sbjct: 521  PSISINKDCV---CDVCHLAKQKKLSYSLSTSKSTKCFELLHMDIWGPYSTATLHGHKYF 577

Query: 379  LTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFISHSCQDL 558
            LTIVDD SR  W+ L+  K++V   +++FI +V+NQF + VK  RSDNG EF   S    
Sbjct: 578  LTIVDDFSRFTWVILLKGKNEVASHVQHFIHLVENQFESTVKIVRSDNGPEF---SLSSF 634

Query: 559  FHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINR 738
            + S  I+HQ SCV+TPQQNG VERKH+ +L I R L+ QS LP+K+W +++L + Y++NR
Sbjct: 635  YASKRIVHQTSCVYTPQQNGRVERKHQCILAIARALLIQSHLPAKYWGYAVLHSVYLMNR 694

Query: 739  LPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQ 918
            +P+ ++    PY  L++  P+ S+LK FGCL Y + T  H+ K   R  KC FLG+  G 
Sbjct: 695  MPSVAIEGGLPYHKLHNRLPDISMLKIFGCLCYVSTTDVHRLKLDHRARKCAFLGFKSGT 754

Query: 919  KGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTA--------ISPLTPLPQV--------- 1047
            KGF   +L + +I+VSR+V F E  FP+ + T         I P+ P+P           
Sbjct: 755  KGFVALDLHSYEIVVSRNVQFEELIFPYPSQTQSQTKWEFFIPPIDPIPLTNDTEPTTDQ 814

Query: 1048 PITSSD---LLDTPLHVTTPAVSETEFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLAD 1218
            P TS+D   +   P+   +   S T  A                 R S+RI+K P  L D
Sbjct: 815  PTTSNDTSTISIEPVDSISSNESITPPAPPDASPQYSPTTEPPPLRKSTRITKLPPHLLD 874

Query: 1219 YVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSFPYTISPLFHSTYVSFLANVSTTKEPH 1398
            Y  +N V                   T +PI    YT      S  +S+  ++ T  EP 
Sbjct: 875  YECNNIVHS-----------------TKYPISK--YTSHNHLSSKQLSYTLSLLTETEPS 915

Query: 1399 SYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYK 1578
            SY +ACK   WV+AM+ EL ALE N+TW +V LP G  PIG KWV+KVK   DGS++RYK
Sbjct: 916  SYSEACKHDHWVKAMNAELQALEQNKTWSIVSLPVGAKPIGSKWVYKVKRKADGSIERYK 975

Query: 1579 ARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDES 1758
            ARLVAKGY+QV G+DY++ FSPVAKM T+R+++AIA+IKNW +HQLD+NNAFLHG L E 
Sbjct: 976  ARLVAKGYNQVEGIDYFETFSPVAKMTTIRVILAIASIKNWFVHQLDVNNAFLHGELCED 1035

Query: 1759 FYMLPPDGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHDPCLFIRH 1938
             YM  P G       +VC L KSLYGLKQASR+W  +L   L      Q+P DP LF++ 
Sbjct: 1036 VYMKIPQGLDGFSADKVCKLTKSLYGLKQASRKWYEKLSQFLISHQFTQAPSDPTLFVKK 1095

Query: 1939 DGSHFLALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIARGSAGTF 2118
               +F ALL+YVDD+++TG +  +I  +K+ L+  F IKDLG  ++FLG+E+A    G  
Sbjct: 1096 TSENFTALLVYVDDIVLTGDSMNEITNIKNDLNHTFGIKDLGVLKFFLGLEVAHSLKGIT 1155

Query: 2119 LNQRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLYLNLTR 2298
            L+QR+Y LD+L++ G L CKP   P+   LKL      P ++   YR+L+G+LLYL  TR
Sbjct: 1156 LSQRQYCLDLLAETGDLGCKPSSIPMDPSLKLHHDDSTPYNDITGYRTLVGKLLYLTNTR 1215

Query: 2299 PDITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAYCDADWGS 2478
            PDI + VQQL QF++ P   H+ AA  ++RYLKGCP  GL++  SS   LT + DADWG 
Sbjct: 1216 PDIAFPVQQLCQFLDCPTILHYKAAHKVLRYLKGCPGTGLYFPRSSDAHLTGFTDADWGG 1275

Query: 2479 C 2481
            C
Sbjct: 1276 C 1276



 Score =  170 bits (431), Expect(2) = 0.0
 Identities = 82/150 (54%), Positives = 107/150 (71%)
 Frame = +3

Query: 2484 DTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLP 2663
            DTR+SITGYC  LG  LI WK KKQ T+S+SS+EAEYRAL++  CEL WL+YLF D  + 
Sbjct: 1278 DTRRSITGYCFFLGSSLICWKSKKQQTISRSSSEAEYRALASGTCELQWLTYLFRDLQVT 1337

Query: 2664 LQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADI 2843
            L     L+CD+Q+A+HI +NPVFHERTKHLDIDCH+VR + +   +    +S  LQLADI
Sbjct: 1338 LTQKPLLYCDSQSAIHIASNPVFHERTKHLDIDCHVVRERLQSGLMKLLPVSGFLQLADI 1397

Query: 2844 LTKNLGSSQHSNISSKLGMLDLHSLPSLRG 2933
            +TK L  +    + +KLG+LD++  P L G
Sbjct: 1398 MTKALHPANFHRLLTKLGLLDIYR-PQLEG 1426


>gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1115

 Score =  660 bits (1702), Expect(2) = 0.0
 Identities = 352/787 (44%), Positives = 487/787 (61%), Gaps = 4/787 (0%)
 Frame = +1

Query: 133  DMWHKRLGHASFSLL----EHLPFLKPLCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHA 300
            ++WH RLGH S + L    +  PF+       +K + + C VCH AKQ +L +  S+S  
Sbjct: 194  NLWHFRLGHLSSNRLNVLNQQFPFI-------SKHSNEVCDVCHFAKQKKLSYSPSSSRV 246

Query: 301  VNLFDLVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVK 480
              +FDL+H+DIWGP+S + +    Y LTI+DD SR  W+ L+  KS+V   + NFI +V+
Sbjct: 247  SKIFDLIHMDIWGPFSKASIHGHKYFLTILDDFSRYTWVVLLKSKSEVKTHVHNFINLVE 306

Query: 481  NQFNTNVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGR 660
            NQ+ T VK  RSDNG EF     +D F+S GI+HQ SCV+TPQQNG VERKH+H+L++ R
Sbjct: 307  NQYETKVKCIRSDNGPEFF---LRDFFNSKGIIHQTSCVYTPQQNGRVERKHQHILNVAR 363

Query: 661  TLMFQSKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYS 840
             LMFQSKLPS FW +++  A ++INR+P+  ++ K+P+E+L    P++S+LK FGCL Y 
Sbjct: 364  ALMFQSKLPSNFWSYAIKHAIFLINRVPSPIISHKTPFELLNKIPPDFSMLKVFGCLCY- 422

Query: 841  ANTQPHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAI 1020
            A+T   + KF PR  K IF+G+  G KGF + +++T++ILVSR+V FHE SFPFH     
Sbjct: 423  ASTHNQRHKFEPRSRKGIFMGFQNGTKGFVILDINTREILVSRNVIFHETSFPFHTSAPT 482

Query: 1021 SPLTPLPQVPITSSDLLDTPLHVTTPAVSETEFAXXXXXXXXXXXXXXXXXRASSRISKP 1200
            SP    P + I+ +     P  +TTP  S  + +                  AS+  S P
Sbjct: 483  SPFITQPSLTISPN-----PDILTTPPTSPNDTSPSQNPNPD----------ASASPSSP 527

Query: 1201 PGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSFPYTISPLFHSTYVSFLANVS 1380
                + +  S +    S+   + P     +   P P  S      P + S Y   L ++ 
Sbjct: 528  AAPTSPFHDSISSYPTSTDFDIVPHHRSSSPAIPPPRRSERDIHPPPYLSEYQYKLPSL- 586

Query: 1381 TTKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDG 1560
              K   S  ++ ++P W EAM  EL ALELN TWD+V+ P    PIGCKWVFK+K  P+G
Sbjct: 587  --KSVQSSTRSIQNPCWREAMTCELKALELNHTWDVVETPSHVRPIGCKWVFKIKRLPNG 644

Query: 1561 SVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLH 1740
            S++RYKARLVAKGY Q+ G+DY++ FSPV KM TVR+++A+A+I  W + QLD++NAFLH
Sbjct: 645  SIERYKARLVAKGYSQIEGIDYFETFSPVVKMTTVRVVLALASINQWHIQQLDVSNAFLH 704

Query: 1741 GHLDESFYMLPPDGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHDP 1920
            G L E  YM  P G T       C L+KSLYGLKQ+SR+W  +L + L   G  Q+  D 
Sbjct: 705  GDLLEDVYMELPQGLTGYSSSHSCKLRKSLYGLKQSSRKWYEKLSNLLLSNGYKQAHSDH 764

Query: 1921 CLFIRHDGSHFLALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIAR 2100
             LF +  GS F ALLIYVDD+++TG++ A+I  +K  L + F +KDLG  +YFLG+E+A 
Sbjct: 765  SLFTKRHGSAFTALLIYVDDIVLTGNSAAEITRIKHILHSNFHVKDLGQLKYFLGIEVAH 824

Query: 2101 GSAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLL 2280
             S G  L QRKY LD+LSD GML CKP  TP+   L+L   +   LD+P  YR L+GRL+
Sbjct: 825  SSKGISLCQRKYCLDLLSDSGMLGCKPSSTPMDSTLRLHDDASGYLDDPLPYRRLVGRLV 884

Query: 2281 YLNLTRPDITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAYC 2460
            YL  TRPDI +S QQLSQF++ P   H  AA+ ++RYLK CP  GLF+     + ++ + 
Sbjct: 885  YLTNTRPDIAFSTQQLSQFMSKPTNAHHAAAMRVLRYLKSCPGTGLFFPRVCPIQVSGFS 944

Query: 2461 DADWGSC 2481
            DADW +C
Sbjct: 945  DADWATC 951



 Score =  157 bits (396), Expect(2) = 0.0
 Identities = 80/149 (53%), Positives = 99/149 (66%)
 Frame = +3

Query: 2487 TRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLPL 2666
            +R+SITGYC  +G  LISWK KKQTTVS+SS+EAEYRAL++  CEL W+ YL  D  + L
Sbjct: 954  SRRSITGYCFFIGNALISWKTKKQTTVSRSSSEAEYRALASATCELQWIIYLLRDLHISL 1013

Query: 2667 QLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADIL 2846
                 L+CDN +ALHI ANPVFHERTKHLDIDCHIVR K +   +    + S  QLADI 
Sbjct: 1014 SQISLLYCDNTSALHIAANPVFHERTKHLDIDCHIVREKTQAGLMKLLPVPSAKQLADIF 1073

Query: 2847 TKNLGSSQHSNISSKLGMLDLHSLPSLRG 2933
            TK L         SKL + ++ + P+  G
Sbjct: 1074 TKALPPHAFKLNLSKLQLQNIFAPPACGG 1102


>gb|PNX93131.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 982

 Score =  645 bits (1664), Expect(2) = 0.0
 Identities = 354/805 (43%), Positives = 483/805 (60%), Gaps = 13/805 (1%)
 Frame = +1

Query: 106  TSFTTDSFLDMWHKRLGHASFSLLEHLPFLKPLCNTGAKTAIQQCVVCHMAKQHRLPFPT 285
            +++TT     +WH RLGH S   L  L    P   T   T I  C +CH+A+  +LP+  
Sbjct: 29   STYTTIPKSAIWHFRLGHPSHHRLVSLKAKFPYV-TVDPTGI--CDICHLARHKKLPYSN 85

Query: 286  SASHAVNLFDLVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENF 465
            S + A + +D++H DIWGP S   +    Y LT VDD SR  W+ LM  K++    + N 
Sbjct: 86   SFNKATHAYDVIHFDIWGPISIKSIHGHSYFLTAVDDYSRFTWIILMKSKAETRNHVINL 145

Query: 466  ILMVKNQFNTNVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHL 645
            I M+  Q+N  VK  RSDNG EF      + + SHGILHQ SCV +PQQNG VERKH+H+
Sbjct: 146  IKMIHTQYNHQVKIVRSDNGPEFFM---TEFYSSHGILHQTSCVESPQQNGRVERKHQHI 202

Query: 646  LDIGRTLMFQSKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFG 825
            L+I R L++QS LP  FW +++L A  IIN++ T  L  KSP+E+L+   P+ + LK FG
Sbjct: 203  LNIARALLYQSNLPKYFWSYAVLHATAIINKIVTPVLQNKSPHEMLFHCLPDLNELKVFG 262

Query: 826  CLVYSANTQPHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPF- 1002
             L Y++    +K K +PRG KC+FLG   G KG  L++LD+K I +SR+V   +H  P+ 
Sbjct: 263  SLAYASTLDVNKTKLSPRGRKCVFLGQKQGVKGSILFDLDSKNIFLSRNVTHFDHILPYT 322

Query: 1003 ----------HNLTAISPLTPLPQVPITSSDLLDTPLHVTTPA--VSETEFAXXXXXXXX 1146
                      H+     P   + Q   TS++  DT    T P   +S+   +        
Sbjct: 323  TNTSKLHWHYHSTINCEPFLDIDQSH-TSTNPSDTTPSPTPPTNIISDPNPSTSSPLPSS 381

Query: 1147 XXXXXXXXXRASSRISKPPGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSFPY 1326
                     R   RI   P +L+D+V S      +S  + K  S    TGT +PI SF +
Sbjct: 382  PFPIQPANTRPD-RIKHRPSYLSDFVCS------ASDDSAKSSS----TGTIYPISSF-H 429

Query: 1327 TISPLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPG 1506
            ++S L  S  V F ++++   EP +Y +ACK   W++AM  EL+AL    TW +VDLPP 
Sbjct: 430  SLSQLSPSHSV-FTSSLTQHTEPRTYTEACKSQHWIQAMTSELEALARTGTWKIVDLPPN 488

Query: 1507 KDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIA 1686
              PIG KWV+K+K   DG+++RYKARLVAKGY+QV G+D++D FSPVAK+ TVR+L+AIA
Sbjct: 489  VKPIGSKWVYKIKHKSDGTIERYKARLVAKGYNQVEGLDFFDTFSPVAKLTTVRMLLAIA 548

Query: 1687 TIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGKPGQVCFLKKSLYGLKQASRQWNT 1866
            +IK W LHQLD+NNAFLHG L E+ YM  PDG    KP QVC L KSLYGLKQASR+W  
Sbjct: 549  SIKGWFLHQLDVNNAFLHGDLQENVYMSIPDGVQCSKPNQVCKLLKSLYGLKQASRKWYE 608

Query: 1867 ELCDKLTRFGLNQSPHDPCLFIRHDGSHFLALLIYVDDVLVTGSNDADIQALKSYLDTLF 2046
            +L   L + G  QS  D  LF      +F ALLIYVDD+++ G++  +I  +K+ LDT F
Sbjct: 609  KLTSLLVKEGYTQSSSDHSLFTISQQDNFTALLIYVDDIILAGTSLQEINRIKNILDTHF 668

Query: 2047 TIKDLGFARYFLGMEIARGSAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQS 2226
             IKDLG  +YFLG+E+A    G  ++QRKY LD+L D G+L  KP  TPL   +KL    
Sbjct: 669  KIKDLGVVKYFLGLEVAHSKEGISISQRKYCLDLLHDSGLLGSKPASTPLDPSVKLHHDD 728

Query: 2227 GRPLDEPDKYRSLIGRLLYLNLTRPDITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCP 2406
            G+P ++   YR L+G+LLYL  TRPDI ++ QQLSQF++ P   H+ AA  ++RYLK  P
Sbjct: 729  GKPFEDISMYRRLVGKLLYLTNTRPDIAFATQQLSQFLHKPTMTHYKAACRVIRYLKHNP 788

Query: 2407 SLGLFYASSSSLDLTAYCDADWGSC 2481
             +GL +  ++ + L  Y DADW  C
Sbjct: 789  GMGLIFKRNADIQLIGYSDADWAGC 813



 Score =  170 bits (431), Expect(2) = 0.0
 Identities = 80/143 (55%), Positives = 104/143 (72%)
 Frame = +3

Query: 2484 DTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLP 2663
            DTR+S TGYC  +G  LISWK KKQTT+SKSS+EAEYRALS+  CEL+WL YL  D  + 
Sbjct: 815  DTRRSTTGYCFFVGSSLISWKAKKQTTISKSSSEAEYRALSSATCELVWLLYLLKDLHIE 874

Query: 2664 LQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADI 2843
                  LFCDNQ+ALHI +NPVFHERTKH++IDCH+VR K ++  +    +S+  QLAD 
Sbjct: 875  CSKQPVLFCDNQSALHIASNPVFHERTKHIEIDCHLVREKVQEGLLRLIPVSTQEQLADF 934

Query: 2844 LTKNLGSSQHSNISSKLGMLDLH 2912
            LTK+L + +  +   KLG+LD++
Sbjct: 935  LTKSLPAPKFHDFLCKLGLLDIY 957