BLASTX nr result

ID: Rehmannia30_contig00012355 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00012355
         (1384 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN26580.1| hypothetical protein CDL12_00647 [Handroanthus im...    60   2e-06

>gb|PIN26580.1| hypothetical protein CDL12_00647 [Handroanthus impetiginosus]
          Length = 224

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 4/194 (2%)
 Frame = -2

Query: 1041 DRTAMEKLSDAELVTSFCLNHSKAEAQLAALISRARVGFADPSNIAELNNSKKEVIRLKA 862
            DR  M + SD E +  F  N +K       LI  A +G A+         SK++V  +K 
Sbjct: 14   DRQLMNQASDGEALAQFSSNLAKMTLWGGNLI--AHLGGANDKFAQMQIESKRQVDNMKL 71

Query: 861  RETKLLEENRRYKEGEEVNKATVASLEAKVKALETDNADLKTELSDLQIRCTVNVDQARA 682
               +L              + + A+L+ K   L+ D+  L  +L D+  R +  +++A+ 
Sbjct: 72   MHMEL--------------EKSYANLQEKYCNLQADHEKLDAQLLDVVARHSRELEKAKE 117

Query: 681  EGVEAGRQSFLTSPEGSSIVQAIRER----VKQAFLSSKEFIRVLSVSAMEYYGFAFDQA 514
            E     R+ F  S EG  ++Q + ER     K+ FL S EF +++    + YY F +   
Sbjct: 118  EA----RRDFPNSEEGKQLLQVLLERKKEEFKEEFLCSDEFRKIVVDQTLVYYYFGYKYL 173

Query: 513  ELQLRERGITTEPF 472
            + QL+ +GI +  F
Sbjct: 174  KDQLKIKGIDSSVF 187


Top