BLASTX nr result
ID: Rehmannia30_contig00012155
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00012155
(438 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012840944.1| PREDICTED: RNA polymerase sigma factor sigF,... 138 2e-35
ref|XP_012840943.1| PREDICTED: RNA polymerase sigma factor sigF,... 138 2e-35
ref|XP_011094632.1| RNA polymerase sigma factor sigF, chloroplas... 133 7e-34
ref|XP_011094631.1| RNA polymerase sigma factor sigF, chloroplas... 133 1e-33
gb|PIN23381.1| hypothetical protein CDL12_03889 [Handroanthus im... 132 2e-33
gb|PKI57600.1| hypothetical protein CRG98_021928 [Punica granatum] 124 5e-33
gb|EPS66259.1| hypothetical protein M569_08519 [Genlisea aurea] 122 2e-32
gb|AKC88770.1| sigma factor [Francoa sonchifolia] 127 1e-31
ref|XP_018812494.1| PREDICTED: RNA polymerase sigma factor sigF,... 120 2e-31
emb|CDP06761.1| unnamed protein product [Coffea canephora] 127 2e-31
gb|OWM69698.1| hypothetical protein CDL15_Pgr025547 [Punica gran... 124 2e-30
gb|KZV34129.1| RNA polymerase sigma factor sigF, chloroplastic [... 123 4e-30
gb|EEF42923.1| RNA polymerase sigma factor rpoD, putative [Ricin... 123 6e-30
ref|XP_015574853.1| PREDICTED: RNA polymerase sigma factor sigF,... 123 6e-30
ref|XP_023900784.1| RNA polymerase sigma factor sigF, chloroplas... 123 6e-30
gb|AFK38759.1| unknown [Lotus japonicus] 117 3e-29
ref|XP_021655825.1| RNA polymerase sigma factor sigF, chloroplas... 120 3e-29
ref|XP_021655824.1| RNA polymerase sigma factor sigF, chloroplas... 120 6e-29
gb|AKC88774.1| sigma factor [Melianthus villosus] 120 7e-29
ref|XP_021897328.1| RNA polymerase sigma factor sigF, chloroplas... 120 8e-29
>ref|XP_012840944.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X2 [Erythranthe guttata]
Length = 558
Score = 138 bits (347), Expect = 2e-35
Identities = 68/76 (89%), Positives = 73/76 (96%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MRQHTRNLLSVLNPRERKIIRLRFGIE GEQKSLS+IGAGFGLSKER+RQ+ESRALYKLK
Sbjct: 483 MRQHTRNLLSVLNPRERKIIRLRFGIEDGEQKSLSDIGAGFGLSKERIRQIESRALYKLK 542
Query: 258 QCLSSQGLEAYADMLI 211
QCLSS GL AYA+ML+
Sbjct: 543 QCLSSHGLSAYAEMLV 558
>ref|XP_012840943.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X1 [Erythranthe guttata]
gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Erythranthe guttata]
Length = 559
Score = 138 bits (347), Expect = 2e-35
Identities = 68/76 (89%), Positives = 73/76 (96%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MRQHTRNLLSVLNPRERKIIRLRFGIE GEQKSLS+IGAGFGLSKER+RQ+ESRALYKLK
Sbjct: 484 MRQHTRNLLSVLNPRERKIIRLRFGIEDGEQKSLSDIGAGFGLSKERIRQIESRALYKLK 543
Query: 258 QCLSSQGLEAYADMLI 211
QCLSS GL AYA+ML+
Sbjct: 544 QCLSSHGLSAYAEMLV 559
>ref|XP_011094632.1| RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Sesamum
indicum]
ref|XP_011094633.1| RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Sesamum
indicum]
Length = 496
Score = 133 bits (334), Expect = 7e-34
Identities = 68/76 (89%), Positives = 71/76 (93%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MRQH RNLLSVL+PRERKIIRLRFGIE GEQKSLSEIGAGFGLSKERVRQLESRALYKLK
Sbjct: 421 MRQHIRNLLSVLSPRERKIIRLRFGIEHGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 480
Query: 258 QCLSSQGLEAYADMLI 211
QCL S GL AYA+M+I
Sbjct: 481 QCLGSHGLAAYANMII 496
>ref|XP_011094631.1| RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Sesamum
indicum]
Length = 561
Score = 133 bits (334), Expect = 1e-33
Identities = 68/76 (89%), Positives = 71/76 (93%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MRQH RNLLSVL+PRERKIIRLRFGIE GEQKSLSEIGAGFGLSKERVRQLESRALYKLK
Sbjct: 486 MRQHIRNLLSVLSPRERKIIRLRFGIEHGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 545
Query: 258 QCLSSQGLEAYADMLI 211
QCL S GL AYA+M+I
Sbjct: 546 QCLGSHGLAAYANMII 561
>gb|PIN23381.1| hypothetical protein CDL12_03889 [Handroanthus impetiginosus]
Length = 547
Score = 132 bits (333), Expect = 2e-33
Identities = 66/76 (86%), Positives = 71/76 (93%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MRQH RNLLSVLNPRERKIIRLRFGIE G+ KSLSEIG GFGL+KERVRQLESRA+YKLK
Sbjct: 472 MRQHVRNLLSVLNPRERKIIRLRFGIEDGKLKSLSEIGDGFGLTKERVRQLESRAMYKLK 531
Query: 258 QCLSSQGLEAYADMLI 211
QCL SQGLEAYAD+L+
Sbjct: 532 QCLGSQGLEAYADLLV 547
>gb|PKI57600.1| hypothetical protein CRG98_021928 [Punica granatum]
Length = 206
Score = 124 bits (312), Expect = 5e-33
Identities = 61/76 (80%), Positives = 69/76 (90%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MRQH RNLL +L+P+ER+IIRLRFGIE GEQKSLSEIG FGLSKERVRQLE+RALYKLK
Sbjct: 131 MRQHVRNLLGILSPKERRIIRLRFGIEDGEQKSLSEIGDIFGLSKERVRQLENRALYKLK 190
Query: 258 QCLSSQGLEAYADMLI 211
QCLSS GL+AY D+L+
Sbjct: 191 QCLSSHGLDAYGDLLV 206
>gb|EPS66259.1| hypothetical protein M569_08519 [Genlisea aurea]
Length = 164
Score = 122 bits (305), Expect = 2e-32
Identities = 57/76 (75%), Positives = 70/76 (92%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MR+HTRNLLS LNPRERKI+RLRFG+E G+Q+SLS+IG G GL+KER+RQLE+RA+YKLK
Sbjct: 89 MRRHTRNLLSFLNPRERKILRLRFGLEDGKQRSLSDIGNGLGLTKERIRQLENRAMYKLK 148
Query: 258 QCLSSQGLEAYADMLI 211
QCL++QGL AY D+LI
Sbjct: 149 QCLNTQGLAAYTDLLI 164
>gb|AKC88770.1| sigma factor [Francoa sonchifolia]
Length = 549
Score = 127 bits (320), Expect = 1e-31
Identities = 63/76 (82%), Positives = 71/76 (93%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MRQH RNLLS+L+P+ER+IIRLRFGIE G+QKSLSEIGA FGLSKERVRQLESRALY+LK
Sbjct: 474 MRQHVRNLLSILSPKERRIIRLRFGIEDGKQKSLSEIGAVFGLSKERVRQLESRALYRLK 533
Query: 258 QCLSSQGLEAYADMLI 211
QCLSSQGL AY D+L+
Sbjct: 534 QCLSSQGLGAYTDLLV 549
>ref|XP_018812494.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Juglans regia]
Length = 206
Score = 120 bits (302), Expect = 2e-31
Identities = 59/76 (77%), Positives = 70/76 (92%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MRQH RNLLS+L+PRER+IIRLRFGIE G+QKSLSEIG FGLSKERVRQLE+RAL++LK
Sbjct: 131 MRQHARNLLSILSPRERRIIRLRFGIEDGKQKSLSEIGNMFGLSKERVRQLENRALHRLK 190
Query: 258 QCLSSQGLEAYADMLI 211
QCLSS+GL AY ++L+
Sbjct: 191 QCLSSEGLVAYTELLV 206
>emb|CDP06761.1| unnamed protein product [Coffea canephora]
Length = 556
Score = 127 bits (319), Expect = 2e-31
Identities = 64/76 (84%), Positives = 70/76 (92%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MR H RNLL +LNP+ERKIIRLRFGIE G+QKSLSEIGA FGLSKERVRQLE+RALYKLK
Sbjct: 481 MRIHIRNLLRILNPKERKIIRLRFGIEDGKQKSLSEIGAVFGLSKERVRQLETRALYKLK 540
Query: 258 QCLSSQGLEAYADMLI 211
QCL+SQGL AYADML+
Sbjct: 541 QCLNSQGLNAYADMLL 556
>gb|OWM69698.1| hypothetical protein CDL15_Pgr025547 [Punica granatum]
Length = 553
Score = 124 bits (312), Expect = 2e-30
Identities = 61/76 (80%), Positives = 69/76 (90%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MRQH RNLL +L+P+ER+IIRLRFGIE GEQKSLSEIG FGLSKERVRQLE+RALYKLK
Sbjct: 478 MRQHVRNLLGILSPKERRIIRLRFGIEDGEQKSLSEIGDIFGLSKERVRQLENRALYKLK 537
Query: 258 QCLSSQGLEAYADMLI 211
QCLSS GL+AY D+L+
Sbjct: 538 QCLSSHGLDAYGDLLV 553
>gb|KZV34129.1| RNA polymerase sigma factor sigF, chloroplastic [Dorcoceras
hygrometricum]
Length = 492
Score = 123 bits (308), Expect = 4e-30
Identities = 61/76 (80%), Positives = 68/76 (89%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MRQH RNLL +LN RERKIIRLRFGIE G+Q+SLSEIGA FGL+KERVRQLESRALYKL+
Sbjct: 417 MRQHIRNLLGILNTRERKIIRLRFGIEDGKQRSLSEIGAVFGLTKERVRQLESRALYKLR 476
Query: 258 QCLSSQGLEAYADMLI 211
QCL SQGL AY D+L+
Sbjct: 477 QCLGSQGLAAYTDILV 492
>gb|EEF42923.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
Length = 548
Score = 123 bits (308), Expect = 6e-30
Identities = 60/76 (78%), Positives = 71/76 (93%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MR+H +LL++LNPRERKIIRLR+GIE G++KSLSEIG+ FGLSKERVRQLESRALYKLK
Sbjct: 473 MRKHVLSLLNILNPRERKIIRLRYGIEDGKKKSLSEIGSVFGLSKERVRQLESRALYKLK 532
Query: 258 QCLSSQGLEAYADMLI 211
QCL+S GLEAYAD+L+
Sbjct: 533 QCLASHGLEAYADLLV 548
>ref|XP_015574853.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Ricinus
communis]
Length = 554
Score = 123 bits (308), Expect = 6e-30
Identities = 60/76 (78%), Positives = 71/76 (93%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MR+H +LL++LNPRERKIIRLR+GIE G++KSLSEIG+ FGLSKERVRQLESRALYKLK
Sbjct: 479 MRKHVLSLLNILNPRERKIIRLRYGIEDGKKKSLSEIGSVFGLSKERVRQLESRALYKLK 538
Query: 258 QCLSSQGLEAYADMLI 211
QCL+S GLEAYAD+L+
Sbjct: 539 QCLASHGLEAYADLLV 554
>ref|XP_023900784.1| RNA polymerase sigma factor sigF, chloroplastic [Quercus suber]
gb|POE50311.1| rna polymerase sigma factor sigf, chloroplastic [Quercus suber]
Length = 570
Score = 123 bits (308), Expect = 6e-30
Identities = 62/76 (81%), Positives = 69/76 (90%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MRQH RNLLS L+PRERKIIRLRFGI+ EQKSL+EIG FGLSKERVRQLESRALY+LK
Sbjct: 495 MRQHVRNLLSNLSPRERKIIRLRFGIDNSEQKSLAEIGNMFGLSKERVRQLESRALYRLK 554
Query: 258 QCLSSQGLEAYADMLI 211
QCLSS+GL AYAD+L+
Sbjct: 555 QCLSSEGLGAYADLLV 570
>gb|AFK38759.1| unknown [Lotus japonicus]
Length = 311
Score = 117 bits (294), Expect = 3e-29
Identities = 59/76 (77%), Positives = 67/76 (88%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MR+H RNLL LNPRER+IIRLRFGIE G +KSLSEIG FGLSKERVRQLESRAL KLK
Sbjct: 236 MRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 295
Query: 258 QCLSSQGLEAYADMLI 211
QCL+S GL+AYA++L+
Sbjct: 296 QCLASHGLDAYANLLV 311
>ref|XP_021655825.1| RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Hevea
brasiliensis]
Length = 475
Score = 120 bits (301), Expect = 3e-29
Identities = 60/76 (78%), Positives = 68/76 (89%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MRQH R LL++LN +ER+IIRLR+GIE G+QKSLSEIG FGLSKERVRQLESRALYKLK
Sbjct: 400 MRQHVRGLLNILNLKERQIIRLRYGIEDGKQKSLSEIGNVFGLSKERVRQLESRALYKLK 459
Query: 258 QCLSSQGLEAYADMLI 211
QCL S GLEAYAD+L+
Sbjct: 460 QCLGSHGLEAYADLLV 475
>ref|XP_021655824.1| RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Hevea
brasiliensis]
Length = 552
Score = 120 bits (301), Expect = 6e-29
Identities = 60/76 (78%), Positives = 68/76 (89%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MRQH R LL++LN +ER+IIRLR+GIE G+QKSLSEIG FGLSKERVRQLESRALYKLK
Sbjct: 477 MRQHVRGLLNILNLKERQIIRLRYGIEDGKQKSLSEIGNVFGLSKERVRQLESRALYKLK 536
Query: 258 QCLSSQGLEAYADMLI 211
QCL S GLEAYAD+L+
Sbjct: 537 QCLGSHGLEAYADLLV 552
>gb|AKC88774.1| sigma factor [Melianthus villosus]
Length = 538
Score = 120 bits (300), Expect = 7e-29
Identities = 60/76 (78%), Positives = 69/76 (90%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MR+H R LL +L+ +ER+IIRLRFGIE GEQKSLSEIGA FGLSKERVRQLESRAL++LK
Sbjct: 463 MRKHMRGLLGILSSKERRIIRLRFGIEDGEQKSLSEIGAIFGLSKERVRQLESRALHRLK 522
Query: 258 QCLSSQGLEAYADMLI 211
QCLSSQGLEAY +ML+
Sbjct: 523 QCLSSQGLEAYVNMLV 538
>ref|XP_021897328.1| RNA polymerase sigma factor sigF, chloroplastic [Carica papaya]
Length = 557
Score = 120 bits (300), Expect = 8e-29
Identities = 59/76 (77%), Positives = 69/76 (90%)
Frame = -1
Query: 438 MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 259
MRQH RNLL VL+P+ER+II+LRFGIE G+QKSLSEIG FGLSKERVRQLESRALY+LK
Sbjct: 482 MRQHVRNLLGVLSPKERRIIKLRFGIEDGKQKSLSEIGEIFGLSKERVRQLESRALYRLK 541
Query: 258 QCLSSQGLEAYADMLI 211
QC++S GL AY+D+LI
Sbjct: 542 QCMNSHGLGAYSDLLI 557