BLASTX nr result
ID: Rehmannia30_contig00011392
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00011392
(431 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011095342.1| serine/arginine-rich splicing factor SC35 is... 114 3e-28
gb|PIN11623.1| hypothetical protein CDL12_15779 [Handroanthus im... 103 5e-25
ref|XP_012855043.1| PREDICTED: RNA-binding protein 7 [Erythranth... 95 1e-21
ref|XP_022861502.1| RNA-binding protein 7 [Olea europaea var. sy... 84 2e-17
ref|XP_019237546.1| PREDICTED: splicing factor 3B subunit 4 isof... 74 3e-13
ref|XP_016497737.1| PREDICTED: RNA-binding protein 7-like [Nicot... 73 4e-13
ref|XP_009768332.1| PREDICTED: spliceosome-associated protein 49... 73 4e-13
emb|CDP11518.1| unnamed protein product [Coffea canephora] 71 3e-12
ref|XP_015168104.1| PREDICTED: RNA-binding protein 7 isoform X1 ... 69 1e-11
gb|ABC86742.1| RNA recognition motif-containing protein [Vitis p... 69 1e-11
emb|CDP20303.1| unnamed protein product [Coffea canephora] 69 2e-11
ref|XP_009620259.1| PREDICTED: splicing factor 3B subunit 4-like... 69 2e-11
ref|XP_002271789.1| PREDICTED: RNA-binding protein 7 [Vitis vini... 67 8e-11
ref|XP_004250692.1| PREDICTED: RNA-binding protein 7 isoform X2 ... 66 2e-10
ref|XP_016539601.1| PREDICTED: RNA-binding protein 7 [Capsicum a... 66 3e-10
ref|XP_010112047.1| splicing factor 3B subunit 4 [Morus notabili... 65 3e-10
ref|XP_015058959.1| PREDICTED: RNA-binding protein SGN1 isoform ... 65 3e-10
ref|XP_019163854.1| PREDICTED: RNA-binding protein 7 [Ipomoea nil] 64 1e-09
ref|XP_021649941.1| RNA-binding protein 7 [Hevea brasiliensis] 64 2e-09
gb|POE77239.1| hypothetical protein CFP56_36652 [Quercus suber] 59 6e-08
>ref|XP_011095342.1| serine/arginine-rich splicing factor SC35 isoform X1 [Sesamum
indicum]
Length = 265
Score = 114 bits (284), Expect = 3e-28
Identities = 54/68 (79%), Positives = 59/68 (86%)
Frame = -3
Query: 429 FSENKINYAQAPVPSDVSMHQPNGYRSYHDSTDYNYGRRVFGAVLDSVSRTSSGRYERHN 250
FSE+K+NYAQ VPSD SM QPNGYRSYHD+TDYNY RRVFGA LDSVSR+ SGRYE N
Sbjct: 200 FSEHKLNYAQ--VPSDKSMQQPNGYRSYHDNTDYNYSRRVFGAALDSVSRSRSGRYETRN 257
Query: 249 SMNYNPSY 226
S+NYNPSY
Sbjct: 258 SVNYNPSY 265
>gb|PIN11623.1| hypothetical protein CDL12_15779 [Handroanthus impetiginosus]
Length = 197
Score = 103 bits (258), Expect = 5e-25
Identities = 49/68 (72%), Positives = 56/68 (82%)
Frame = -3
Query: 429 FSENKINYAQAPVPSDVSMHQPNGYRSYHDSTDYNYGRRVFGAVLDSVSRTSSGRYERHN 250
F ++KIN+AQ VPSD+S+HQPN YRSYH+ST YNY RRVFGA LDSVSRT GRYE N
Sbjct: 132 FQDHKINHAQ--VPSDISIHQPNRYRSYHESTYYNYSRRVFGAALDSVSRTRLGRYEMRN 189
Query: 249 SMNYNPSY 226
MN+NPSY
Sbjct: 190 DMNHNPSY 197
>ref|XP_012855043.1| PREDICTED: RNA-binding protein 7 [Erythranthe guttata]
gb|EYU22704.1| hypothetical protein MIMGU_mgv1a014187mg [Erythranthe guttata]
Length = 198
Score = 95.1 bits (235), Expect = 1e-21
Identities = 49/69 (71%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = -3
Query: 429 FSENKINYAQAPVPSDVSMHQPNGYRSYHDSTDY-NYGRRVFGAVLDSVSRTSSGRYERH 253
FSE KIN+ Q VPSD+S+HQ NGYRSY+ STDY NY RVFGAVLDSVSR+SS RYE
Sbjct: 132 FSEQKINHVQ--VPSDISVHQSNGYRSYNKSTDYKNYSGRVFGAVLDSVSRSSSSRYETR 189
Query: 252 NSMNYNPSY 226
SM+YN SY
Sbjct: 190 KSMHYNSSY 198
>ref|XP_022861502.1| RNA-binding protein 7 [Olea europaea var. sylvestris]
Length = 198
Score = 84.3 bits (207), Expect = 2e-17
Identities = 40/65 (61%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Frame = -3
Query: 426 SENKINYAQAPVPSDVSMHQPNGYRSYHDSTDYNYGRRVFGAVLDSVSRTSSGRY-ERHN 250
SE++INY Q PV S VS+HQPNGYRS++DSTD +Y RR+FGA DS+S GRY +R N
Sbjct: 133 SEHQINYVQVPVRSGVSVHQPNGYRSHYDSTDNDYRRRLFGAASDSISHARPGRYDDRRN 192
Query: 249 SMNYN 235
S NY+
Sbjct: 193 STNYH 197
>ref|XP_019237546.1| PREDICTED: splicing factor 3B subunit 4 isoform X1 [Nicotiana
attenuata]
gb|OIT22337.1| hypothetical protein A4A49_31801 [Nicotiana attenuata]
Length = 206
Score = 73.6 bits (179), Expect = 3e-13
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 7/75 (9%)
Frame = -3
Query: 429 FSENKINYAQAPVPSDVSMHQPNGYRS-------YHDSTDYNYGRRVFGAVLDSVSRTSS 271
FSE++ N Q PVP VS++Q NGYRS ++D +Y+YGRRVFG LDS++R+
Sbjct: 133 FSEHQTNSTQVPVPPGVSVNQSNGYRSPYDGYRSHYDGNNYDYGRRVFGDALDSITRSRL 192
Query: 270 GRYERHNSMNYNPSY 226
GRY+ N +Y PSY
Sbjct: 193 GRYDTRNPTSY-PSY 206
>ref|XP_016497737.1| PREDICTED: RNA-binding protein 7-like [Nicotiana tabacum]
Length = 206
Score = 73.2 bits (178), Expect = 4e-13
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 7/75 (9%)
Frame = -3
Query: 429 FSENKINYAQAPVPSDVSMHQPNGYRS-------YHDSTDYNYGRRVFGAVLDSVSRTSS 271
FSE++ N+ Q PVP VS++Q NGYRS +D +Y+YGRRVFG LDS++R+
Sbjct: 133 FSEHQTNFTQVPVPPGVSVNQSNGYRSPYDGYRSQYDGNNYDYGRRVFGDALDSITRSRL 192
Query: 270 GRYERHNSMNYNPSY 226
GRY+ N +Y PSY
Sbjct: 193 GRYDTLNPTSY-PSY 206
>ref|XP_009768332.1| PREDICTED: spliceosome-associated protein 49 isoform X1 [Nicotiana
sylvestris]
Length = 206
Score = 73.2 bits (178), Expect = 4e-13
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 7/75 (9%)
Frame = -3
Query: 429 FSENKINYAQAPVPSDVSMHQPNGYRS-------YHDSTDYNYGRRVFGAVLDSVSRTSS 271
FSE++ N+ Q PVP VS++Q NGYRS +D +Y+YGRRVFG LDS++R+
Sbjct: 133 FSEHQTNFTQVPVPPGVSVNQSNGYRSPYDGYRSQYDGNNYDYGRRVFGDALDSITRSRL 192
Query: 270 GRYERHNSMNYNPSY 226
GRY+ N +Y PSY
Sbjct: 193 GRYDTLNPTSY-PSY 206
>emb|CDP11518.1| unnamed protein product [Coffea canephora]
Length = 210
Score = 70.9 bits (172), Expect = 3e-12
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 15/83 (18%)
Frame = -3
Query: 429 FSENKINYAQAPVPSDVSMHQPNGYRS---------------YHDSTDYNYGRRVFGAVL 295
F ++++NY+Q V VS++QPNGYRS ++DS +Y+Y RRVFGA L
Sbjct: 128 FQDHQVNYSQVRVTPGVSVNQPNGYRSNYDNNDYEHSNGYRSHYDSNNYDYSRRVFGAAL 187
Query: 294 DSVSRTSSGRYERHNSMNYNPSY 226
D+++R+ GRY+ +S +Y SY
Sbjct: 188 DNINRSRLGRYDTRDSTSYYASY 210
>ref|XP_015168104.1| PREDICTED: RNA-binding protein 7 isoform X1 [Solanum tuberosum]
Length = 205
Score = 69.3 bits (168), Expect = 1e-11
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 7/75 (9%)
Frame = -3
Query: 429 FSENKINYAQAPVPSDVSMHQPNGYRS-------YHDSTDYNYGRRVFGAVLDSVSRTSS 271
FS+++ NY Q PVP VS++Q NGYRS ++D +Y+Y +RVFGA LDS++ +
Sbjct: 132 FSQHQTNYTQVPVPPGVSVNQSNGYRSPYDGYRSHYDGNNYDYDQRVFGAALDSITSSRL 191
Query: 270 GRYERHNSMNYNPSY 226
GRY+ + +Y PSY
Sbjct: 192 GRYDPRSPTSY-PSY 205
>gb|ABC86742.1| RNA recognition motif-containing protein [Vitis pseudoreticulata]
Length = 194
Score = 68.9 bits (167), Expect = 1e-11
Identities = 35/63 (55%), Positives = 42/63 (66%)
Frame = -3
Query: 414 INYAQAPVPSDVSMHQPNGYRSYHDSTDYNYGRRVFGAVLDSVSRTSSGRYERHNSMNYN 235
+NYAQ P SD ++HQPN Y S D Y+Y RRVFGA LDS+SRT S Y+ N + Y
Sbjct: 134 VNYAQVPASSD-TLHQPNRYSSQLDGHSYDYSRRVFGATLDSISRTRSRYYDSSNPITY- 191
Query: 234 PSY 226
PSY
Sbjct: 192 PSY 194
>emb|CDP20303.1| unnamed protein product [Coffea canephora]
Length = 210
Score = 68.9 bits (167), Expect = 2e-11
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 15/83 (18%)
Frame = -3
Query: 429 FSENKINYAQAPVPSDVSMHQPNGYRSYHDSTDY---------------NYGRRVFGAVL 295
F ++++NY+Q V VS++QPNGYRS +D+ DY +Y RRVFGA L
Sbjct: 128 FQDHQVNYSQVRVTPGVSVNQPNGYRSNYDNNDYEHSNGYRSHYNSNNYDYSRRVFGAAL 187
Query: 294 DSVSRTSSGRYERHNSMNYNPSY 226
D+++R+ GRY+ +S +Y +Y
Sbjct: 188 DNINRSRLGRYDTRDSTSYYATY 210
>ref|XP_009620259.1| PREDICTED: splicing factor 3B subunit 4-like isoform X1 [Nicotiana
tomentosiformis]
ref|XP_016486321.1| PREDICTED: splicing factor 3B subunit 4-like isoform X1 [Nicotiana
tabacum]
Length = 206
Score = 68.6 bits (166), Expect = 2e-11
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 7/75 (9%)
Frame = -3
Query: 429 FSENKINYAQAPVPSDVSMHQPNGYRS-------YHDSTDYNYGRRVFGAVLDSVSRTSS 271
FSE++ N+ Q VP VS++Q NGYRS ++D +Y+YGRRVFG L+S++R+
Sbjct: 133 FSEHQTNFTQVSVPPGVSVNQSNGYRSPYDGYRSHYDGNNYDYGRRVFGDALNSITRSRL 192
Query: 270 GRYERHNSMNYNPSY 226
GRY+ N ++ PSY
Sbjct: 193 GRYDTRNPTSH-PSY 206
>ref|XP_002271789.1| PREDICTED: RNA-binding protein 7 [Vitis vinifera]
emb|CBI17037.3| unnamed protein product, partial [Vitis vinifera]
Length = 194
Score = 67.0 bits (162), Expect = 8e-11
Identities = 34/63 (53%), Positives = 42/63 (66%)
Frame = -3
Query: 414 INYAQAPVPSDVSMHQPNGYRSYHDSTDYNYGRRVFGAVLDSVSRTSSGRYERHNSMNYN 235
+NYAQ P SD ++HQPN Y S D Y+Y RRVFGA LDS+SRT S ++ N + Y
Sbjct: 134 VNYAQVPASSD-TLHQPNRYSSQLDGHSYDYSRRVFGATLDSISRTRSRYHDSSNPITY- 191
Query: 234 PSY 226
PSY
Sbjct: 192 PSY 194
>ref|XP_004250692.1| PREDICTED: RNA-binding protein 7 isoform X2 [Solanum lycopersicum]
Length = 199
Score = 66.2 bits (160), Expect = 2e-10
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 7/75 (9%)
Frame = -3
Query: 429 FSENKINYAQAPVPSDVSMHQPNGYRS-------YHDSTDYNYGRRVFGAVLDSVSRTSS 271
FS+++ +YAQ PVP VS++Q NGYRS ++D +Y+Y +RVFGA LDS++
Sbjct: 126 FSQHQTSYAQVPVPPGVSVNQSNGYRSPYSGYRSHYDGNNYDYDQRVFGAALDSITSYRL 185
Query: 270 GRYERHNSMNYNPSY 226
GR + + NY PSY
Sbjct: 186 GRCDPRSPTNY-PSY 199
>ref|XP_016539601.1| PREDICTED: RNA-binding protein 7 [Capsicum annuum]
Length = 207
Score = 65.9 bits (159), Expect = 3e-10
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 9/77 (11%)
Frame = -3
Query: 429 FSENKINYAQA--PVPSDVSMHQPNGY-------RSYHDSTDYNYGRRVFGAVLDSVSRT 277
FSE++ N Q P P VS++Q NGY RS++D +Y+Y RRVFGA LDS++R+
Sbjct: 132 FSEHQTNSTQVAVPPPPGVSVNQSNGYGSPYNGYRSHYDGNNYDYDRRVFGAALDSITRS 191
Query: 276 SSGRYERHNSMNYNPSY 226
GRY+ N +Y PSY
Sbjct: 192 RLGRYDARNPSSY-PSY 207
>ref|XP_010112047.1| splicing factor 3B subunit 4 [Morus notabilis]
gb|EXC32466.1| Splicing factor 3B subunit 4 [Morus notabilis]
Length = 189
Score = 65.5 bits (158), Expect = 3e-10
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = -3
Query: 429 FSENKINYAQAPVPSDVSMHQPNGYRSYHDSTDYNYGRRVFGAVLDSVSRTSSGRYERHN 250
FS + +N++QAP P V++H NGY S +D ++ Y RRVFGA LDS+ R+ S RY+ +
Sbjct: 124 FSSHPLNHSQAPPPPGVNIHS-NGYGSPYDGKNFEYSRRVFGATLDSIGRSRSRRYDTSD 182
Query: 249 SMNYNP 232
++Y P
Sbjct: 183 PISYPP 188
>ref|XP_015058959.1| PREDICTED: RNA-binding protein SGN1 isoform X1 [Solanum pennellii]
Length = 201
Score = 65.5 bits (158), Expect = 3e-10
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 7/75 (9%)
Frame = -3
Query: 429 FSENKINYAQAPVPSDVSMHQPNGYRS-------YHDSTDYNYGRRVFGAVLDSVSRTSS 271
FS+++ +YAQ PVP VS++Q NGYRS ++D +Y+Y +RVFGA LDS++ +
Sbjct: 128 FSQHQTSYAQVPVPPGVSVNQSNGYRSPYSGYRSHYDGNNYDYDQRVFGAALDSITSSRL 187
Query: 270 GRYERHNSMNYNPSY 226
GR + + +Y PSY
Sbjct: 188 GRCDPRSPTSY-PSY 201
>ref|XP_019163854.1| PREDICTED: RNA-binding protein 7 [Ipomoea nil]
Length = 197
Score = 63.9 bits (154), Expect = 1e-09
Identities = 33/68 (48%), Positives = 43/68 (63%)
Frame = -3
Query: 429 FSENKINYAQAPVPSDVSMHQPNGYRSYHDSTDYNYGRRVFGAVLDSVSRTSSGRYERHN 250
FSE++ A+ V V +HQ NGYRS++D Y+ RRVFGA LDS++ + SGRY N
Sbjct: 132 FSEHQTYSAK--VSPGVPLHQRNGYRSHYDGNKYDNSRRVFGAALDSITPSRSGRYNGRN 189
Query: 249 SMNYNPSY 226
S NY Y
Sbjct: 190 SNNYYSPY 197
>ref|XP_021649941.1| RNA-binding protein 7 [Hevea brasiliensis]
Length = 199
Score = 63.5 bits (153), Expect = 2e-09
Identities = 33/67 (49%), Positives = 43/67 (64%)
Frame = -3
Query: 426 SENKINYAQAPVPSDVSMHQPNGYRSYHDSTDYNYGRRVFGAVLDSVSRTSSGRYERHNS 247
S + NY+Q PVP V+ H NGY S + +YN GRRVFG+ DS+SR+ S RY+ N
Sbjct: 135 SASPSNYSQVPVPPGVTHHH-NGYGSQFNGINYNSGRRVFGSTFDSISRSRSRRYDSSNH 193
Query: 246 MNYNPSY 226
+Y PSY
Sbjct: 194 TSY-PSY 199
>gb|POE77239.1| hypothetical protein CFP56_36652 [Quercus suber]
Length = 152
Score = 58.5 bits (140), Expect = 6e-08
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = -3
Query: 429 FSENKINYAQAPVPSDVSMHQPNGYRSYHDSTDYNYGRRVFGAVLDSVSRTSSGRYERHN 250
FS ++N+ Q P P V ++Q NGY S+ + +Y Y RRV GA LD++S S RY+ N
Sbjct: 87 FSAYQVNHPQVPAPPGV-VNQSNGYGSHFNGNNYEYSRRVLGATLDNISHFRSQRYDSSN 145
Query: 249 SMNYNPSY 226
+ Y PSY
Sbjct: 146 PIFY-PSY 152