BLASTX nr result
ID: Rehmannia30_contig00011298
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00011298
(802 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020549244.1| uncharacterized protein LOC105160623 isoform... 197 6e-58
ref|XP_011076392.1| DNA-directed RNA polymerase III subunit rpc4... 197 1e-57
gb|PIM99424.1| DNA-directed RNA polymerase III subunit [Handroan... 176 1e-49
ref|XP_012852318.1| PREDICTED: uncharacterized protein LOC105971... 167 2e-46
gb|KZV29690.1| hypothetical protein F511_21674 [Dorcoceras hygro... 150 2e-39
ref|XP_022891016.1| DNA-directed RNA polymerase III subunit rpc4... 145 7e-38
gb|PKI54528.1| hypothetical protein CRG98_025042 [Punica granatum] 138 3e-35
ref|XP_016489584.1| PREDICTED: DNA-directed RNA polymerase III s... 139 3e-35
ref|XP_016489585.1| PREDICTED: DNA-directed RNA polymerase III s... 138 6e-35
ref|XP_019192068.1| PREDICTED: uncharacterized protein LOC109186... 135 3e-34
emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera] 135 7e-34
ref|XP_002263694.1| PREDICTED: uncharacterized protein LOC100260... 134 2e-33
ref|XP_009784284.1| PREDICTED: DNA-directed RNA polymerase III s... 134 2e-33
ref|XP_009607009.1| PREDICTED: DNA-directed RNA polymerase III s... 134 2e-33
ref|XP_009784283.1| PREDICTED: DNA-directed RNA polymerase III s... 133 3e-33
gb|OIT03056.1| hypothetical protein A4A49_19793 [Nicotiana atten... 132 4e-33
ref|XP_009607010.1| PREDICTED: DNA-directed RNA polymerase III s... 133 4e-33
ref|XP_019246598.1| PREDICTED: DNA-directed RNA polymerase III s... 132 6e-33
ref|XP_016573340.1| PREDICTED: DNA-directed RNA polymerase III s... 132 8e-33
ref|XP_019246597.1| PREDICTED: DNA-directed RNA polymerase III s... 132 8e-33
>ref|XP_020549244.1| uncharacterized protein LOC105160623 isoform X2 [Sesamum indicum]
Length = 343
Score = 197 bits (501), Expect = 6e-58
Identities = 114/214 (53%), Positives = 141/214 (65%), Gaps = 5/214 (2%)
Frame = -3
Query: 629 MDSDRPA--PRKVRFAPKAPPRRNTKP--AKIXXXXXXXXXXXXAQQSLRREVNEHLTRG 462
MD D P+ PRKV+FAPK PPRR +P AK QQ L R+V+EHLTR
Sbjct: 1 MDPDPPSSTPRKVKFAPKGPPRRAPQPLTAKSETAAQDDSDDEQTQQFLTRKVHEHLTRR 60
Query: 461 RTKTEKKSSEQVAFDVAATTGGIRTFGKQKERTDGRSDASKSKGTVDSTETLDDEQNLVT 282
+K EKKSS QVAF IRTFGK +ERT R+DA+ S + + D+QNLV
Sbjct: 61 GSKVEKKSSAQVAFSHGVAANTIRTFGKPRERTGDRADAADS-----NEPAISDDQNLVA 115
Query: 281 SISTELTSTEVTGVGENSVGLTNNAVIVKKKKEYEDPWDY-NSYYPTTIPFRGPNSGDPE 105
S+ST T GV EN+ + +A++VKKK+EY++PWDY +SYYPTT+P+R P SGDPE
Sbjct: 116 SVSTAGTE----GVDENTAS-SADALVVKKKREYKEPWDYKHSYYPTTLPWRRPYSGDPE 170
Query: 104 ELDKAEFEEAPEYDENSLLSAPELGLLDQDDNTR 3
+LDK EFEEA EYDEN+L SA +LGLL QDD R
Sbjct: 171 KLDKEEFEEASEYDENNLSSASDLGLLGQDDTQR 204
>ref|XP_011076392.1| DNA-directed RNA polymerase III subunit rpc4 isoform X1 [Sesamum
indicum]
ref|XP_011076393.1| DNA-directed RNA polymerase III subunit rpc4 isoform X1 [Sesamum
indicum]
ref|XP_011076394.1| DNA-directed RNA polymerase III subunit rpc4 isoform X1 [Sesamum
indicum]
Length = 366
Score = 197 bits (501), Expect = 1e-57
Identities = 114/214 (53%), Positives = 141/214 (65%), Gaps = 5/214 (2%)
Frame = -3
Query: 629 MDSDRPA--PRKVRFAPKAPPRRNTKP--AKIXXXXXXXXXXXXAQQSLRREVNEHLTRG 462
MD D P+ PRKV+FAPK PPRR +P AK QQ L R+V+EHLTR
Sbjct: 1 MDPDPPSSTPRKVKFAPKGPPRRAPQPLTAKSETAAQDDSDDEQTQQFLTRKVHEHLTRR 60
Query: 461 RTKTEKKSSEQVAFDVAATTGGIRTFGKQKERTDGRSDASKSKGTVDSTETLDDEQNLVT 282
+K EKKSS QVAF IRTFGK +ERT R+DA+ S + + D+QNLV
Sbjct: 61 GSKVEKKSSAQVAFSHGVAANTIRTFGKPRERTGDRADAADS-----NEPAISDDQNLVA 115
Query: 281 SISTELTSTEVTGVGENSVGLTNNAVIVKKKKEYEDPWDY-NSYYPTTIPFRGPNSGDPE 105
S+ST T GV EN+ + +A++VKKK+EY++PWDY +SYYPTT+P+R P SGDPE
Sbjct: 116 SVSTAGTE----GVDENTAS-SADALVVKKKREYKEPWDYKHSYYPTTLPWRRPYSGDPE 170
Query: 104 ELDKAEFEEAPEYDENSLLSAPELGLLDQDDNTR 3
+LDK EFEEA EYDEN+L SA +LGLL QDD R
Sbjct: 171 KLDKEEFEEASEYDENNLSSASDLGLLGQDDTQR 204
>gb|PIM99424.1| DNA-directed RNA polymerase III subunit [Handroanthus
impetiginosus]
Length = 359
Score = 176 bits (447), Expect = 1e-49
Identities = 109/214 (50%), Positives = 133/214 (62%), Gaps = 5/214 (2%)
Frame = -3
Query: 629 MDSDRP--APRKVRFAPKAPPRRNTKPAKIXXXXXXXXXXXXA--QQSLRREVNEHLTRG 462
MD D P PRKV+FAPK PPRR+++ Q+SL R+V EHLTR
Sbjct: 1 MDPDPPQSTPRKVKFAPKGPPRRSSRLVTTVNETAAADDEDDEETQRSLSRKVKEHLTRR 60
Query: 461 RTKTEKKSSEQVAFDVAATTGGIRTFGKQKERTDGRSDASKSKGTVDSTETLDDEQNLVT 282
K +KK QVAF + IRTFGKQ+ER + SDA++S+ + TLD Q LV
Sbjct: 61 GPKVDKKPPTQVAFSHGVLSSEIRTFGKQRERINIGSDATRSEES-----TLDSRQKLVA 115
Query: 281 SISTELTSTEVTGVGENSVGLTNNAVIVKKKKEYEDPWDY-NSYYPTTIPFRGPNSGDPE 105
S ST T +GE S L N + I+KKKK+Y +PWDY +SYYPTT+P R P SGDPE
Sbjct: 116 STSTGGTQE----LGEISEDLINGS-IMKKKKDYIEPWDYEHSYYPTTLPLRRPYSGDPE 170
Query: 104 ELDKAEFEEAPEYDENSLLSAPELGLLDQDDNTR 3
LDKAEF E EYDEN+LLSA +LGLLD+DD R
Sbjct: 171 LLDKAEFGEDFEYDENALLSASDLGLLDEDDTPR 204
>ref|XP_012852318.1| PREDICTED: uncharacterized protein LOC105971930 [Erythranthe
guttata]
gb|EYU24936.1| hypothetical protein MIMGU_mgv1a009918mg [Erythranthe guttata]
Length = 327
Score = 167 bits (423), Expect = 2e-46
Identities = 109/217 (50%), Positives = 127/217 (58%), Gaps = 9/217 (4%)
Frame = -3
Query: 629 MDSDRP--APRKVRFAPKAPPRRNTKPAKIXXXXXXXXXXXXA---QQSLRREVNEHLTR 465
MD D P APRKVRFAPK P RR KP+ Q+ L R+V EHL R
Sbjct: 1 MDPDPPKAAPRKVRFAPKEPRRRTPKPSSFKIEPAPEVDDTDDLEAQEFLTRKVKEHLAR 60
Query: 464 -GRTKTEKKSSEQVAFDVAATTGGIRTFGKQKERTDGRSDASKSKGTVDSTE-TLDDEQN 291
GR K+E K QVAF + IRTFG+QKE +D DA VDS E T + QN
Sbjct: 61 RGRPKSENKGRVQVAFSNDVGSSSIRTFGRQKESSDVGHDA------VDSKELTPNGVQN 114
Query: 290 LVTSISTELTSTEVTGVGENSVGLTNNAVIVKKKK-EYEDPWDY-NSYYPTTIPFRGPNS 117
LVTS+S GLTN + KKKK EY++PWDY NSYYPTT+P R P S
Sbjct: 115 LVTSMSI--------------TGLTNGVTVTKKKKREYKEPWDYENSYYPTTLPLRRPYS 160
Query: 116 GDPEELDKAEFEEAPEYDENSLLSAPELGLLDQDDNT 6
G+PE LD +EFE+A EYDE+SL SA LGLLD+D NT
Sbjct: 161 GNPELLDNSEFEDAVEYDEDSLSSASGLGLLDEDANT 197
>gb|KZV29690.1| hypothetical protein F511_21674 [Dorcoceras hygrometricum]
Length = 377
Score = 150 bits (379), Expect = 2e-39
Identities = 95/211 (45%), Positives = 122/211 (57%), Gaps = 5/211 (2%)
Frame = -3
Query: 629 MDSDRPA--PRKVRFAPKAPPRRNTKPA--KIXXXXXXXXXXXXAQQSLRREVNEHLTRG 462
MDSD P+ PRKV+F PK PPRR K A KI A+Q + L+R
Sbjct: 1 MDSDPPSESPRKVKFTPKGPPRRPAKSATAKIEKAEDDGSDDVEAEQRALLRRVQGLSRR 60
Query: 461 RTKTEKKSSEQVAFDVAATTGGIRTFGKQKERTDGRSDASKSKGTVDSTETLDDEQNLVT 282
+K EKKSS QV F ++ +RTFGK +ERT S+ + ++ D+ Q T
Sbjct: 61 GSKVEKKSSAQVVFSHGVSSTPLRTFGKPRERTKDSSEGADAEEVA-----FDNGQISYT 115
Query: 281 SISTELTSTEVTGVGENSVGLTNNAVIVKKKKEYEDPWDY-NSYYPTTIPFRGPNSGDPE 105
S ST+ T E T + + I KKK+EY +PWDY +SYYP T+P R P SG+PE
Sbjct: 116 SPSTDKTDVEET------YNDSTDDAIKKKKREYMEPWDYEHSYYPVTLPLRRPYSGEPE 169
Query: 104 ELDKAEFEEAPEYDENSLLSAPELGLLDQDD 12
LD+AEF+EA EYDEN+L SA ELGLLD+ D
Sbjct: 170 LLDEAEFDEAAEYDENTLSSAKELGLLDEGD 200
>ref|XP_022891016.1| DNA-directed RNA polymerase III subunit rpc4-like [Olea europaea
var. sylvestris]
Length = 361
Score = 145 bits (367), Expect = 7e-38
Identities = 89/216 (41%), Positives = 121/216 (56%), Gaps = 7/216 (3%)
Frame = -3
Query: 629 MDSDRPA--PRKVRFAPKAPPRRNTKPAKIXXXXXXXXXXXXAQQSLRREVNEHLTRGRT 456
MD D P+ PRKV+FAPK PPR+ + + ++L R VNEHLTR R
Sbjct: 1 MDLDPPSSSPRKVKFAPKGPPRKPARQIEPKIEEVDDGSDSREDKALLRRVNEHLTRRRP 60
Query: 455 KTEKKSSEQVAFDVAATTGGIRTFGKQKERTDGRSDASKSKGTV-DSTETLDDEQNLVTS 279
+ EKKSS QVAF + IR+FGKQ+ER D + + + + D TE ++ Q
Sbjct: 61 RAEKKSSVQVAFSHGVASNSIRSFGKQRERKDDQGNVTGLRDLASDGTEIPNNMQLTDAE 120
Query: 278 ISTELTSTEVTGVGENSVGLTNNAVIVKKKKEYEDPWDY-NSYYPTTIPFRGPNSGDPEE 102
I + T + ++ I KKK EY +PWDY +SYYP T+P R P SGDPE
Sbjct: 121 ICEDFTD-------------STSSSISKKKGEYREPWDYDHSYYPITLPLRRPYSGDPEI 167
Query: 101 LDKAEFEEAP---EYDENSLLSAPELGLLDQDDNTR 3
D+AEF +A EYDEN+ SA +LGLL++ D ++
Sbjct: 168 HDEAEFGKAAAKLEYDENATTSASDLGLLEKADQSQ 203
>gb|PKI54528.1| hypothetical protein CRG98_025042 [Punica granatum]
Length = 324
Score = 138 bits (347), Expect = 3e-35
Identities = 87/211 (41%), Positives = 115/211 (54%), Gaps = 5/211 (2%)
Frame = -3
Query: 629 MDSDRPAPRKVRFAPKAPPRRNTKPAKIXXXXXXXXXXXXAQQSLRREVNEHLTRGRTKT 450
MD +P+PRKV+FAPKAPPR+ + L R NE+L R TK
Sbjct: 1 MDEQKPSPRKVKFAPKAPPRKKPHSVAPKTEVEEDDGEAAEAELLLRRFNENLGRQGTKV 60
Query: 449 EKKSSEQVAFDVAATTGG-IRTFGKQKERTDGRSDASKSKGTVDSTETLDDEQNLVTSIS 273
+KKSS QVAFD + IRT+G K+ G S ++K + + DS + Q L
Sbjct: 61 QKKSSVQVAFDQGVVSSTPIRTYGGPKDERSGPSSSTKLRSS-DSEKGAFGSQPLAAKED 119
Query: 272 TELTSTEVTGVGENSVGLTNNAVIVKKKKEYEDPWDY-NSYYPTTIPFRGPNSGDPEELD 96
+ ST+ T I K KEY++PWDY ++YYPT++P R P SGDPE LD
Sbjct: 120 ALVVSTDSTDG------------IPPKMKEYKEPWDYEHTYYPTSLPLRPPCSGDPEILD 167
Query: 95 KAEFEEAP---EYDENSLLSAPELGLLDQDD 12
+AEF EA EYDEN++ A ELGLLD+ +
Sbjct: 168 EAEFGEAARNVEYDENAINPASELGLLDESE 198
>ref|XP_016489584.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
isoform X1 [Nicotiana tabacum]
Length = 358
Score = 139 bits (349), Expect = 3e-35
Identities = 88/216 (40%), Positives = 120/216 (55%), Gaps = 7/216 (3%)
Frame = -3
Query: 629 MDSDRPAPRKVRFAPKAPPRR---NTKPAKIXXXXXXXXXXXXAQQSLRREVNEHLTRGR 459
+ S P RKV+FAPKAPPRR N K A +++RR VNE LTR +
Sbjct: 5 LPSSPPKTRKVKFAPKAPPRRKKQNPVQPKTEADGNEDTNDNEAAEAIRRRVNERLTRQK 64
Query: 458 TKTEKKSSEQVAFDVAATTGGIRTFGKQKERTDGRSDASKSKGTVDSTETLDDEQNLVTS 279
KTEKK+ E A+ IRTFGK KE T R K + D + +D L +S
Sbjct: 65 PKTEKKAVEVAFSHGVASPTSIRTFGKPKELTVNRDSTVKDPESDDRMD-IDSSPPLPSS 123
Query: 278 ISTELTSTEVTGVGENSVGLTNNAVIVKKKKEYEDPWDY-NSYYPTTIPFRGPNSGDPEE 102
I +L V+ ++A+ +KKKEY++PWDY ++ YP T+P R P +GDPE
Sbjct: 124 IGADLAEISVS---------NSDALFKRKKKEYKEPWDYHHTNYPITLPLRRPYAGDPEI 174
Query: 101 LDKAEFEEA---PEYDENSLLSAPELGLLDQDDNTR 3
LD+AEF +A EYDEN++ A ELGLL++ D+ +
Sbjct: 175 LDEAEFGKAAVNAEYDENNIHPASELGLLEKKDDVQ 210
>ref|XP_016489585.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
isoform X2 [Nicotiana tabacum]
Length = 357
Score = 138 bits (347), Expect = 6e-35
Identities = 89/216 (41%), Positives = 121/216 (56%), Gaps = 7/216 (3%)
Frame = -3
Query: 629 MDSDRPAPRKVRFAPKAPPRR---NTKPAKIXXXXXXXXXXXXAQQSLRREVNEHLTRGR 459
+ S P RKV+FAPKAPPRR N K A +++RR VNE LTR +
Sbjct: 5 LPSSPPKTRKVKFAPKAPPRRKKQNPVQPKTEADGNEDTNDNEAAEAIRRRVNERLTRQK 64
Query: 458 TKTEKKSSEQVAFDVAATTGGIRTFGKQKERTDGRSDASKSKGTVDSTETLDDEQNLVTS 279
KTEKK + VA+ T IRTFGK KE T R K + D + +D L +S
Sbjct: 65 PKTEKKVEVAFSHGVASPTS-IRTFGKPKELTVNRDSTVKDPESDDRMD-IDSSPPLPSS 122
Query: 278 ISTELTSTEVTGVGENSVGLTNNAVIVKKKKEYEDPWDYN-SYYPTTIPFRGPNSGDPEE 102
I +L V+ ++A+ +KKKEY++PWDY+ + YP T+P R P +GDPE
Sbjct: 123 IGADLAEISVSN---------SDALFKRKKKEYKEPWDYHHTNYPITLPLRRPYAGDPEI 173
Query: 101 LDKAEFEEA---PEYDENSLLSAPELGLLDQDDNTR 3
LD+AEF +A EYDEN++ A ELGLL++ D+ +
Sbjct: 174 LDEAEFGKAAVNAEYDENNIHPASELGLLEKKDDVQ 209
>ref|XP_019192068.1| PREDICTED: uncharacterized protein LOC109186516 [Ipomoea nil]
ref|XP_019192069.1| PREDICTED: uncharacterized protein LOC109186516 [Ipomoea nil]
Length = 347
Score = 135 bits (341), Expect = 3e-34
Identities = 88/213 (41%), Positives = 114/213 (53%), Gaps = 6/213 (2%)
Frame = -3
Query: 632 SMDSDRPAPRKVRFAPKAPPRRNTKPAKIXXXXXXXXXXXXAQQSLR--REVNEHLTRGR 459
++ S + RK RFAPK PPRR K ++ R R NEHLTRG+
Sbjct: 4 NLPSSPTSSRKFRFAPKPPPRRAKKKVELKTESNRHDASDDEAPDTRLLRRANEHLTRGK 63
Query: 458 TKTEKKSSEQVAFDVAATTGGIRTFGKQKERTDGRSDASKSKGTVDSTETLDDEQNLVTS 279
K EKK+ + V A++ IRT+G +E G +D++ KG+ D ++LV S
Sbjct: 64 AKAEKKAVQVVFSHGVASSAPIRTYGNPRE---GTADSTGLKGS-----GYGDPRDLVPS 115
Query: 278 ISTELTSTEVTGVGENSVGLTNNAVIVKKKKEYEDPWDY-NSYYPTTIPFRGPNSGDPEE 102
S T V + L I KKK+EY +PWDY NSYYP T+P R PNSGDPE
Sbjct: 116 PSN-------TNVDVDEDSLAKAESIKKKKREYREPWDYKNSYYPITLPLRKPNSGDPEI 168
Query: 101 LDKAEFEEA---PEYDENSLLSAPELGLLDQDD 12
LD+AEF EA EYDE + + ELGLLD+ D
Sbjct: 169 LDEAEFGEAARNAEYDETKIHPSSELGLLDEQD 201
>emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera]
Length = 348
Score = 135 bits (339), Expect = 7e-34
Identities = 92/214 (42%), Positives = 116/214 (54%), Gaps = 6/214 (2%)
Frame = -3
Query: 626 DSDRPAPRKVRFAPKAPPRRNTKPAKIXXXXXXXXXXXXAQQSLRREVNEHLTRGRTKTE 447
+S +PRKVRFAPK+PPRR K Q L R VNE L R K E
Sbjct: 5 ESSSVSPRKVRFAPKSPPRRKPKTTAPQPVVAEEEDEAKRAQYLLRRVNEKLRRQGPKVE 64
Query: 446 KKSSEQVAFDVAATTGG--IRTFGKQKERTDGRSDASKSKGTVDSTETLDDEQNLVTSIS 273
K SS QV F A T IRTFG + DG SD KS G T D E+ V+S S
Sbjct: 65 KTSSVQVVFGPGAATPSDTIRTFGVHR---DGNSD--KSSGMELKVSTPDHEEIAVSSXS 119
Query: 272 TELTSTEVTGVGENSVGLTNNAVIVKKKKEYEDPWDY-NSYYPTTIPFRGPNSGDPEELD 96
T T+ T+++ ++K+ Y++PWDY +SYYPTT+P R P+SGDPE LD
Sbjct: 120 T----TKPDETNGXFADATDDSAQIRKR--YKEPWDYVHSYYPTTLPLRKPHSGDPEILD 173
Query: 95 KAEFEEAP---EYDENSLLSAPELGLLDQDDNTR 3
+AEF EA EYDE ++ A ELGLL++ + R
Sbjct: 174 EAEFGEASTNLEYDEKTINPASELGLLEESEKGR 207
>ref|XP_002263694.1| PREDICTED: uncharacterized protein LOC100260717 [Vitis vinifera]
emb|CBI38675.3| unnamed protein product, partial [Vitis vinifera]
Length = 348
Score = 134 bits (336), Expect = 2e-33
Identities = 93/214 (43%), Positives = 118/214 (55%), Gaps = 6/214 (2%)
Frame = -3
Query: 626 DSDRPAPRKVRFAPKAPPRRNTKPAKIXXXXXXXXXXXXAQQSLRREVNEHLTRGRTKTE 447
+S +PRKVRFAPK+PPRR K Q L R VNE L R K E
Sbjct: 5 ESSSVSPRKVRFAPKSPPRRKPKTTAPQPVVAEEEDEAKRAQYLLRRVNEKLRRQGPKVE 64
Query: 446 KKSSEQVAFDVAATTGG--IRTFGKQKERTDGRSDASKSKGTVDSTETLDDEQNLVTSIS 273
K SS QV F A T IRTFG + DG SD KS G T D E+ V+S S
Sbjct: 65 KTSSVQVVFGPGAATPSDTIRTFGVHR---DGNSD--KSSGMELKVSTPDHEEIAVSSPS 119
Query: 272 TELTSTEVTGVGENSVGLTNNAVIVKKKKEYEDPWDY-NSYYPTTIPFRGPNSGDPEELD 96
T E G ++ T+++ ++K+ Y++PWDY +SYYPTT+P R P+SGDPE LD
Sbjct: 120 TTKPD-ETNGYFADA---TDDSAQIRKR--YKEPWDYVHSYYPTTLPLRKPHSGDPEILD 173
Query: 95 KAEFEEAP---EYDENSLLSAPELGLLDQDDNTR 3
+AEF EA EYDE ++ A ELGLL++ + R
Sbjct: 174 EAEFGEASTNLEYDEKTINPASELGLLEESEKGR 207
>ref|XP_009784284.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
isoform X2 [Nicotiana sylvestris]
ref|XP_016507146.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
isoform X2 [Nicotiana tabacum]
Length = 355
Score = 134 bits (336), Expect = 2e-33
Identities = 87/216 (40%), Positives = 120/216 (55%), Gaps = 7/216 (3%)
Frame = -3
Query: 629 MDSDRPAPRKVRFAPKAPPRR---NTKPAKIXXXXXXXXXXXXAQQSLRREVNEHLTRGR 459
+ S P RKV+FAPKAPPRR N+ K A +++ VNE LTR +
Sbjct: 5 LPSSPPKTRKVKFAPKAPPRRKKQNSVQHKTEADRNEDTNDNEAAEAILHRVNERLTRQK 64
Query: 458 TKTEKKSSEQVAFDVAATTGGIRTFGKQKERTDGRSDASKSKGTVDSTETLDDEQNLVTS 279
KTEKK A VA+ T IRTFGK KE R K + D + +D L +S
Sbjct: 65 PKTEKKVEVAFAHGVASPTS-IRTFGKPKELAINRGSTVKDPESDDRMD-IDSSPPLPSS 122
Query: 278 ISTELTSTEVTGVGENSVGLTNNAVIVKKKKEYEDPWDYN-SYYPTTIPFRGPNSGDPEE 102
I +L V+ ++A++ +KKKEY++PWDY+ + YP T+P R P +GDPE
Sbjct: 123 IEADLAEISVSN---------SDALLKRKKKEYKEPWDYHHTNYPITLPLRRPYAGDPEI 173
Query: 101 LDKAEFEEA---PEYDENSLLSAPELGLLDQDDNTR 3
LD+AEF +A EYDEN++ A ELGLL++ D+ +
Sbjct: 174 LDEAEFGKAAANAEYDENNIHPASELGLLEKKDDVQ 209
>ref|XP_009607009.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
isoform X1 [Nicotiana tomentosiformis]
Length = 358
Score = 134 bits (336), Expect = 2e-33
Identities = 86/216 (39%), Positives = 119/216 (55%), Gaps = 7/216 (3%)
Frame = -3
Query: 629 MDSDRPAPRKVRFAPKAPPRR---NTKPAKIXXXXXXXXXXXXAQQSLRREVNEHLTRGR 459
+ S P RKV+FAPKAPPRR N K A +++RR VNE LTR +
Sbjct: 5 LPSSPPKTRKVKFAPKAPPRRKKQNPVQPKTEADGNEDTNDNEAAEAIRRRVNERLTRQK 64
Query: 458 TKTEKKSSEQVAFDVAATTGGIRTFGKQKERTDGRSDASKSKGTVDSTETLDDEQNLVTS 279
KTEKK+ E A+ IRTFGK KE T K + D + +D L +S
Sbjct: 65 PKTEKKAVEVAFSHGVASPTSIRTFGKPKELTVNWGSTVKDPESDDRMD-IDSSPPLPSS 123
Query: 278 ISTELTSTEVTGVGENSVGLTNNAVIVKKKKEYEDPWDY-NSYYPTTIPFRGPNSGDPEE 102
I +L V+ ++A+ +KKKEY++PWDY ++ YP T+P R P +G+PE
Sbjct: 124 IGADLAEISVS---------NSDALFKRKKKEYKEPWDYHHTNYPITLPLRRPYAGNPEI 174
Query: 101 LDKAEFEEA---PEYDENSLLSAPELGLLDQDDNTR 3
LD+AEF +A EYDEN++ A ELGLL++ D+ +
Sbjct: 175 LDEAEFGKAAVNAEYDENNIHPASELGLLEKKDDVQ 210
>ref|XP_009784283.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
isoform X1 [Nicotiana sylvestris]
ref|XP_016507141.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
isoform X1 [Nicotiana tabacum]
Length = 356
Score = 133 bits (335), Expect = 3e-33
Identities = 85/216 (39%), Positives = 119/216 (55%), Gaps = 7/216 (3%)
Frame = -3
Query: 629 MDSDRPAPRKVRFAPKAPPRR---NTKPAKIXXXXXXXXXXXXAQQSLRREVNEHLTRGR 459
+ S P RKV+FAPKAPPRR N+ K A +++ VNE LTR +
Sbjct: 5 LPSSPPKTRKVKFAPKAPPRRKKQNSVQHKTEADRNEDTNDNEAAEAILHRVNERLTRQK 64
Query: 458 TKTEKKSSEQVAFDVAATTGGIRTFGKQKERTDGRSDASKSKGTVDSTETLDDEQNLVTS 279
KTEKK+ E A+ IRTFGK KE R K + D + +D L +S
Sbjct: 65 PKTEKKAVEVAFAHGVASPTSIRTFGKPKELAINRGSTVKDPESDDRMD-IDSSPPLPSS 123
Query: 278 ISTELTSTEVTGVGENSVGLTNNAVIVKKKKEYEDPWDYN-SYYPTTIPFRGPNSGDPEE 102
I +L V+ ++A++ +KKKEY++PWDY+ + YP T+P R P +GDPE
Sbjct: 124 IEADLAEISVSN---------SDALLKRKKKEYKEPWDYHHTNYPITLPLRRPYAGDPEI 174
Query: 101 LDKAEFEEA---PEYDENSLLSAPELGLLDQDDNTR 3
LD+AEF +A EYDEN++ A ELGLL++ D+ +
Sbjct: 175 LDEAEFGKAAANAEYDENNIHPASELGLLEKKDDVQ 210
>gb|OIT03056.1| hypothetical protein A4A49_19793 [Nicotiana attenuata]
Length = 319
Score = 132 bits (332), Expect = 4e-33
Identities = 85/216 (39%), Positives = 117/216 (54%), Gaps = 7/216 (3%)
Frame = -3
Query: 629 MDSDRPAPRKVRFAPKAPPRR---NTKPAKIXXXXXXXXXXXXAQQSLRREVNEHLTRGR 459
+ S P RKV+FAPKAPPRR N+ K A +++ VNE LTR +
Sbjct: 5 LPSSPPKTRKVKFAPKAPPRRKKQNSVQPKTEADGNEDTNDNEAAEAILHRVNERLTRQK 64
Query: 458 TKTEKKSSEQVAFDVAATTGGIRTFGKQKERTDGRSDASKSKGTVDSTETLDDEQNLVTS 279
KTEKK+ E A+ IRTFGK KE T R K + D + +D L S
Sbjct: 65 PKTEKKAVEVAFAHGVASPTSIRTFGKPKELTVNRGSTVKDPESDDRMD-IDSSPPLPAS 123
Query: 278 ISTELTSTEVTGVGENSVGLTNNAVIVKKKKEYEDPWDY-NSYYPTTIPFRGPNSGDPEE 102
I +L V+ ++A+ +KKKEY++PWDY ++ YP T+P R P +GDPE
Sbjct: 124 IGADLAEISVS---------NSDALFKRKKKEYKEPWDYHHTNYPITLPLRRPYAGDPEI 174
Query: 101 LDKAEFEEA---PEYDENSLLSAPELGLLDQDDNTR 3
LD+AEF +A EYDE ++ A ELGLL++ D+ +
Sbjct: 175 LDEAEFGKAAANAEYDETNIHPASELGLLEKKDDVQ 210
>ref|XP_009607010.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
isoform X2 [Nicotiana tomentosiformis]
Length = 357
Score = 133 bits (334), Expect = 4e-33
Identities = 87/216 (40%), Positives = 120/216 (55%), Gaps = 7/216 (3%)
Frame = -3
Query: 629 MDSDRPAPRKVRFAPKAPPRR---NTKPAKIXXXXXXXXXXXXAQQSLRREVNEHLTRGR 459
+ S P RKV+FAPKAPPRR N K A +++RR VNE LTR +
Sbjct: 5 LPSSPPKTRKVKFAPKAPPRRKKQNPVQPKTEADGNEDTNDNEAAEAIRRRVNERLTRQK 64
Query: 458 TKTEKKSSEQVAFDVAATTGGIRTFGKQKERTDGRSDASKSKGTVDSTETLDDEQNLVTS 279
KTEKK + VA+ T IRTFGK KE T K + D + +D L +S
Sbjct: 65 PKTEKKVEVAFSHGVASPTS-IRTFGKPKELTVNWGSTVKDPESDDRMD-IDSSPPLPSS 122
Query: 278 ISTELTSTEVTGVGENSVGLTNNAVIVKKKKEYEDPWDYN-SYYPTTIPFRGPNSGDPEE 102
I +L V+ ++A+ +KKKEY++PWDY+ + YP T+P R P +G+PE
Sbjct: 123 IGADLAEISVSN---------SDALFKRKKKEYKEPWDYHHTNYPITLPLRRPYAGNPEI 173
Query: 101 LDKAEFEEA---PEYDENSLLSAPELGLLDQDDNTR 3
LD+AEF +A EYDEN++ A ELGLL++ D+ +
Sbjct: 174 LDEAEFGKAAVNAEYDENNIHPASELGLLEKKDDVQ 209
>ref|XP_019246598.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
isoform X2 [Nicotiana attenuata]
Length = 355
Score = 132 bits (333), Expect = 6e-33
Identities = 87/216 (40%), Positives = 118/216 (54%), Gaps = 7/216 (3%)
Frame = -3
Query: 629 MDSDRPAPRKVRFAPKAPPRR---NTKPAKIXXXXXXXXXXXXAQQSLRREVNEHLTRGR 459
+ S P RKV+FAPKAPPRR N+ K A +++ VNE LTR +
Sbjct: 5 LPSSPPKTRKVKFAPKAPPRRKKQNSVQPKTEADGNEDTNDNEAAEAILHRVNERLTRQK 64
Query: 458 TKTEKKSSEQVAFDVAATTGGIRTFGKQKERTDGRSDASKSKGTVDSTETLDDEQNLVTS 279
KTEKK A VA+ T IRTFGK KE T R K + D + +D L S
Sbjct: 65 PKTEKKVEVAFAHGVASPTS-IRTFGKPKELTVNRGSTVKDPESDDRMD-IDSSPPLPAS 122
Query: 278 ISTELTSTEVTGVGENSVGLTNNAVIVKKKKEYEDPWDYN-SYYPTTIPFRGPNSGDPEE 102
I +L V+ ++A+ +KKKEY++PWDY+ + YP T+P R P +GDPE
Sbjct: 123 IGADLAEISVSN---------SDALFKRKKKEYKEPWDYHHTNYPITLPLRRPYAGDPEI 173
Query: 101 LDKAEFEEA---PEYDENSLLSAPELGLLDQDDNTR 3
LD+AEF +A EYDE ++ A ELGLL++ D+ +
Sbjct: 174 LDEAEFGKAAANAEYDETNIHPASELGLLEKKDDVQ 209
>ref|XP_016573340.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 isoform X1
[Capsicum annuum]
Length = 373
Score = 132 bits (333), Expect = 8e-33
Identities = 89/221 (40%), Positives = 126/221 (57%), Gaps = 12/221 (5%)
Frame = -3
Query: 629 MDSDRPAP---RKVRFAPKAPPRR---NTKPAKIXXXXXXXXXXXXAQQSLRREVNEHLT 468
MD + P P RKV+FAPK PPRR N+ K A +++ R+VNE LT
Sbjct: 1 MDPNLPPPSSTRKVKFAPKGPPRRKKQNSVQPKTEGNGNEESNDNEAAEAILRKVNERLT 60
Query: 467 RGRTKTEKKSSEQVAF--DVAATTGGIRTFGKQKERTDGRSDASKSKGTVDSTETLDDEQ 294
R + KTEKK++ VAF VA+ T RT GK KE T K + D + +D
Sbjct: 61 RQKPKTEKKAAVAVAFAHGVASPTS-TRTVGKPKELTINPDSTPKDDESYDKMD-IDSLP 118
Query: 293 NLVTSISTELTSTEVTGVGENSVGLTNNAVIVKKKKEYEDPWDYN-SYYPTTIPFRGPNS 117
L +S ++L V +++++ +KKKEY++PWDY+ S YPTT+P R P +
Sbjct: 119 TLPSSTGSDLAEISVNN---------SDSLLKRKKKEYKEPWDYHHSNYPTTLPLRRPYA 169
Query: 116 GDPEELDKAEFEEA---PEYDENSLLSAPELGLLDQDDNTR 3
GDPE LD+AEF +A EYDEN++ +A ELGLL++ D+ +
Sbjct: 170 GDPEILDEAEFGKAAANAEYDENNVHAASELGLLEKKDDVQ 210
>ref|XP_019246597.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
isoform X1 [Nicotiana attenuata]
Length = 356
Score = 132 bits (332), Expect = 8e-33
Identities = 85/216 (39%), Positives = 117/216 (54%), Gaps = 7/216 (3%)
Frame = -3
Query: 629 MDSDRPAPRKVRFAPKAPPRR---NTKPAKIXXXXXXXXXXXXAQQSLRREVNEHLTRGR 459
+ S P RKV+FAPKAPPRR N+ K A +++ VNE LTR +
Sbjct: 5 LPSSPPKTRKVKFAPKAPPRRKKQNSVQPKTEADGNEDTNDNEAAEAILHRVNERLTRQK 64
Query: 458 TKTEKKSSEQVAFDVAATTGGIRTFGKQKERTDGRSDASKSKGTVDSTETLDDEQNLVTS 279
KTEKK+ E A+ IRTFGK KE T R K + D + +D L S
Sbjct: 65 PKTEKKAVEVAFAHGVASPTSIRTFGKPKELTVNRGSTVKDPESDDRMD-IDSSPPLPAS 123
Query: 278 ISTELTSTEVTGVGENSVGLTNNAVIVKKKKEYEDPWDY-NSYYPTTIPFRGPNSGDPEE 102
I +L V+ ++A+ +KKKEY++PWDY ++ YP T+P R P +GDPE
Sbjct: 124 IGADLAEISVS---------NSDALFKRKKKEYKEPWDYHHTNYPITLPLRRPYAGDPEI 174
Query: 101 LDKAEFEEA---PEYDENSLLSAPELGLLDQDDNTR 3
LD+AEF +A EYDE ++ A ELGLL++ D+ +
Sbjct: 175 LDEAEFGKAAANAEYDETNIHPASELGLLEKKDDVQ 210